The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6RFQ | 4872 | 2023-02-23 | 2019-04-16 | 3.3 | 3.42 | — | 3.4 | 0.013 | 1.57 | 3.0 | 0.95 | 11.77 | 0.01 | 1.889 | 9.29 | 0.17 | 7.0 | 92.8 | 0.1 | -4.08 | 0.69 | 0.79 | 1.90 | 3.4 | 0.008 | 1.56 | 0.0 | 0.29 | 15.85 | 0.00 | 2.045 | 10.90 | 0.51 | 5.0 | 95.0 | 0.0 | -0.30 | 1.39 | 0.73 | 0.86 | 2.06 | 62052 | 7637 | 59 | 0 | 36 | 0 | 0 | logfile |
✔ | 7oZP | 13131 | 2023-02-21 | 2021-06-28 | 3.8 | 4.17 | 3.83 | 4.0 | 0.002 | 0.39 | 0.0 | 0.04 | 14.04 | 0.00 | 1.969 | 4.71 | 0.00 | 2.1 | 97.9 | 0.0 | 1.24 | 0.79 | 0.71 | 0.86 | 4.0 | 0.004 | 0.71 | 0.0 | 0.05 | 16.72 | 0.00 | 2.095 | 15.95 | 0.33 | 3.8 | 96.2 | 0.0 | 0.23 | 0.98 | 0.83 | 0.79 | 1.29 | 54330 | 6774 | 32 | 0 | 10 | 0 | 0 | logfile |
✔ | 7TNW | 26021 | 2023-02-26 | 2022-01-21 | 3.1 | 2.85 | — | 2.9 | 0.013 | 1.80 | 21.0 | 0.13 | 14.83 | 0.01 | 2.197 | 5.99 | 1.81 | 7.7 | 91.5 | 0.8 | -1.73 | 0.85 | 0.84 | 3.50 | 2.2 | 0.004 | 0.80 | 0.0 | 0.05 | 15.96 | 0.00 | 2.005 | 10.03 | 0.51 | 5.6 | 94.4 | 0.0 | -0.37 | 1.06 | 0.86 | 0.84 | 2.89 | 27846 | 3357 | 39 | 0 | 111 | 0 | 0 | logfile |
✔ | 7CXM | 30492 | 2023-02-23 | 2020-09-02 | 2.9 | 3.58 | — | 3.3 | 0.010 | 1.58 | 80.0 | 0.10 | 18.07 | 0.01 | 1.572 | 20.04 | 12.89 | 9.0 | 90.4 | 0.6 | -4.28 | 0.83 | 0.88 | 3.19 | 3.3 | 0.003 | 0.74 | 0.0 | 0.04 | 17.34 | 0.00 | 2.146 | 12.61 | 5.36 | 7.4 | 92.4 | 0.1 | -1.28 | 0.58 | 0.82 | 0.87 | 2.82 | 21295 | 2563 | 12 | 57 | 8 | 0 | 0 | logfile |
✔ | 7V4i | 31712 | 2023-02-26 | 2021-08-13 | 3.3 | 3.91 | — | 3.9 | 0.003 | 0.58 | 0.0 | 0.04 | 14.20 | 0.01 | 2.079 | 10.38 | 0.00 | 5.5 | 94.5 | 0.0 | -1.15 | 0.70 | 0.74 | 1.97 | 3.9 | 0.003 | 0.60 | 0.0 | 0.04 | 15.97 | 0.01 | 2.102 | 11.33 | 0.17 | 4.9 | 95.1 | 0.0 | -0.92 | 0.37 | 0.71 | 0.75 | 1.59 | 27680 | 3560 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CRT | 26958 | 2023-02-22 | 2022-05-11 | 3.0 | 2.91 | 3.16 | 3.0 | 0.003 | 0.58 | 0.0 | 0.04 | 11.64 | 0.01 | 2.205 | 5.04 | 2.36 | 1.5 | 98.5 | 0.0 | 1.86 | 0.51 | 0.72 | 2.69 | 3.0 | 0.003 | 0.58 | 0.0 | 0.04 | 14.73 | 0.00 | 2.109 | 8.68 | 1.41 | 1.7 | 98.3 | 0.0 | 2.02 | 0.66 | 0.52 | 0.84 | 2.49 | 17925 | 2305 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 7SBL | 24982 | 2023-02-26 | 2021-09-25 | 3.4 | 2.79 | — | 2.2 | 0.013 | 1.86 | 19.0 | 0.13 | 13.83 | 0.01 | 2.197 | 8.36 | 2.72 | 7.8 | 91.5 | 0.7 | -1.91 | 0.84 | 0.76 | 2.62 | 2.0 | 0.003 | 0.77 | 0.0 | 0.05 | 16.26 | 0.00 | 2.051 | 11.38 | 0.56 | 5.9 | 94.0 | 0.1 | -0.62 | 1.49 | 0.84 | 0.83 | 2.03 | 27026 | 3286 | 35 | 0 | 96 | 0 | 0 | logfile |
✔ | 7SBP | 24984 | 2023-02-26 | 2021-09-25 | 3.1 | 2.87 | — | 2.2 | 0.013 | 1.77 | 15.0 | 0.11 | 14.64 | 0.01 | 2.078 | 6.07 | 1.38 | 7.0 | 92.3 | 0.7 | -1.85 | 0.83 | 0.81 | 3.14 | 3.0 | 0.004 | 0.77 | 0.0 | 0.05 | 16.25 | 0.00 | 2.104 | 10.58 | 0.65 | 4.7 | 95.1 | 0.2 | -0.32 | 0.66 | 0.84 | 0.84 | 2.47 | 27693 | 3330 | 42 | 0 | 123 | 0 | 0 | logfile |
✔ | 7XoA | 33342 | 2023-02-27 | 2022-05-01 | 3.2 | 2.32 | 3.20 | 2.1 | 0.002 | 0.54 | 0.0 | 0.04 | 9.21 | 0.01 | 1.863 | 8.77 | 0.06 | 2.8 | 97.2 | 0.1 | -2.65 | 0.59 | 0.48 | 1.63 | 2.0 | 0.004 | 0.69 | 0.0 | 0.05 | 14.53 | 0.00 | 2.118 | 9.99 | 0.38 | 5.3 | 94.7 | 0.0 | -1.07 | 0.87 | 0.73 | 0.77 | 2.59 | 29202 | 3670 | 8 | 0 | 35 | 0 | 0 | logfile |
✔ | 7WK0 | 32554 | 2023-02-19 | 2022-01-08 | 3.32 | 2.37 | — | 2.2 | 0.004 | 0.65 | 0.0 | 0.04 | 11.02 | 0.01 | 2.233 | 9.59 | 7.71 | 12.2 | 87.5 | 0.2 | -4.96 | 0.75 | 0.75 | 3.28 | 2.2 | 0.005 | 0.77 | 0.0 | 0.05 | 14.35 | 0.00 | 2.121 | 11.27 | 0.75 | 13.5 | 86.4 | 0.1 | -2.88 | 1.23 | 0.77 | 0.78 | 3.22 | 9724 | 1264 | 8 | 0 | 2 | 0 | 0 | logfile |
✔ | 7JLX | 22383 | 2023-02-17 | 2020-07-30 | 4.6 | 3.86 | — | 3.7 | 0.001 | 0.42 | 0.0 | 0.04 | 3.80 | 0.00 | 2.240 | 2.96 | 0.00 | 6.7 | 93.3 | 0.0 | 1.23 | 0.54 | 0.51 | — | 3.8 | 0.003 | 0.75 | 0.0 | 0.04 | 7.17 | 0.00 | 2.306 | 8.03 | 0.00 | 17.7 | 82.3 | 0.0 | -2.25 | 2.42 | 0.48 | 0.53 | — | 3288 | 664 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PHK | 13418 | 2023-02-25 | 2021-08-17 | 3.1 | 3.39 | 3.16 | 3.3 | 0.004 | 0.54 | 0.0 | 0.04 | 13.69 | 0.00 | 2.269 | 5.89 | 2.53 | 2.3 | 97.7 | 0.0 | -0.88 | 0.53 | 0.62 | 2.92 | 3.3 | 0.003 | 0.62 | 0.0 | 0.04 | 15.47 | 0.00 | 2.127 | 9.17 | 0.24 | 2.6 | 97.4 | 0.0 | 0.42 | 3.65 | 0.69 | 0.83 | 3.19 | 25404 | 3140 | 16 | 0 | 32 | 0 | 0 | logfile |
✔ | 7SBK | 24981 | 2023-02-26 | 2021-09-25 | 3.1 | 2.77 | — | 2.3 | 0.013 | 1.78 | 14.0 | 0.11 | 14.92 | 0.01 | 1.339 | 6.46 | 1.49 | 6.3 | 93.0 | 0.7 | -1.92 | 0.83 | 0.80 | 3.47 | 2.2 | 0.004 | 0.76 | 0.0 | 0.05 | 16.26 | 0.00 | 2.099 | 11.55 | 0.52 | 6.0 | 93.8 | 0.2 | -0.39 | 1.07 | 0.84 | 0.83 | 2.90 | 27417 | 3303 | 39 | 0 | 117 | 0 | 0 | logfile |
✔ | 7XoC | 33344 | 2023-02-17 | 2022-05-01 | 3.0 | 2.28 | 3.19 | 2.1 | 0.002 | 0.48 | 0.0 | 0.04 | 9.17 | 0.00 | 2.149 | 5.26 | 0.00 | 2.1 | 97.9 | 0.0 | -2.11 | 0.73 | 0.69 | 2.72 | 2.0 | 0.003 | 0.62 | 0.0 | 0.04 | 16.35 | 0.00 | 2.086 | 8.52 | 1.61 | 3.1 | 96.9 | 0.0 | 0.98 | 1.11 | 0.76 | 0.82 | 3.22 | 6432 | 786 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 7UPX | 26677 | 2023-02-17 | 2022-04-18 | 3.2 | 3.46 | — | 3.4 | 0.012 | 1.87 | 4.0 | 0.11 | 13.66 | 0.01 | 2.176 | 5.28 | 2.20 | 5.4 | 93.2 | 1.4 | -0.66 | 0.64 | 0.88 | 3.81 | 3.4 | 0.003 | 0.67 | 0.0 | 0.04 | 14.97 | 0.00 | 2.087 | 6.73 | 0.18 | 4.5 | 95.4 | 0.2 | 0.33 | 0.49 | 0.63 | 0.87 | 3.31 | 4930 | 635 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 6GCS | 4384 | 2023-02-22 | 2018-04-19 | 4.32 | 4.51 | — | 4.3 | 0.010 | 1.35 | 3.0 | 0.97 | 12.02 | 0.01 | 2.231 | 8.78 | 0.73 | 13.4 | 85.9 | 0.8 | -4.79 | 0.77 | 0.78 | — | 4.3 | 0.009 | 1.69 | 0.0 | 0.30 | 12.66 | 0.00 | 2.049 | 20.00 | 0.00 | 13.2 | 86.5 | 0.3 | -2.20 | 0.78 | 0.78 | 0.79 | — | 55137 | 6864 | 53 | 0 | 667 | 0 | 0 | logfile |
✘ | 6KNG | 0731 | 2023-02-18 | 2019-08-05 | 2.85 | 3.15 | — | 3.1 | 0.005 | 0.65 | 0.0 | 0.05 | 14.34 | 0.00 | 2.093 | 4.97 | 3.68 | 0.9 | 99.1 | 0.0 | -2.31 | 0.83 | 0.91 | 4.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7749 | 1002 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 6RFR | 4873 | 2023-02-25 | 2019-04-16 | 3.2 | 3.36 | — | 3.4 | 0.012 | 1.52 | 2.0 | 0.92 | 12.03 | 0.01 | 2.078 | 8.39 | 0.16 | 6.0 | 93.9 | 0.1 | -3.68 | 0.74 | 0.81 | 2.59 | 3.4 | 0.008 | 1.50 | 0.0 | 0.28 | 15.65 | 0.00 | 2.076 | 10.04 | 0.35 | 4.0 | 95.9 | 0.0 | -0.08 | 2.29 | 0.75 | 0.87 | 2.57 | 65934 | 8057 | 65 | 0 | 49 | 0 | 0 | logfile |
✔ | 7N1X | 24126 | 2023-02-25 | 2021-05-28 | 4.0 | 2.34 | — | 1.8 | 0.013 | 1.88 | 13.0 | 0.14 | 14.66 | 0.01 | 1.484 | 9.88 | 1.97 | 8.1 | 91.3 | 0.6 | -2.39 | 0.80 | 0.69 | — | 1.8 | 0.005 | 0.84 | 0.0 | 0.05 | 16.27 | 0.01 | 2.115 | 16.15 | 0.77 | 5.4 | 94.6 | 0.0 | -1.23 | 0.73 | 0.80 | 0.69 | — | 26810 | 3257 | 35 | 0 | 95 | 0 | 0 | logfile |
✘ | 8GWN | 34317 | 2023-02-24 | 2022-09-17 | 3.38 | 3.97 | 3.47 | 3.7 | 0.015 | 1.23 | 0.0 | 0.06 | 18.41 | 0.01 | 1.979 | 38.61 | 14.07 | 23.5 | 75.0 | 1.5 | -6.16 | 0.86 | 0.83 | 1.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21860 | 2655 | 12 | 52 | 9 | 0 | 0 | logfile |