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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8DV2 | 27731 | 2023-12-08 | 2022-07-27 | 3.5 | 3.88 | 3.57 | 3.7 | 0.018 | 1.68 | 1.0 | 0.10 | 10.74 | 0.01 | 2.222 | 1.33 | 0.14 | 1.9 | 98.0 | 0.1 | -0.17 | 0.78 | 0.79 | 2.69 | 3.7 | 0.004 | 0.73 | 0.0 | 0.05 | 15.56 | 0.00 | 2.155 | 12.13 | 0.43 | 3.7 | 96.2 | 0.1 | 1.34 | 4.15 | 0.78 | 0.80 | 1.62 | 6545 | 796 | 4 | 0 | 7 | 0 | 0 | logfile |
✔ | 7UKH | 26581 | 2023-12-09 | 2022-04-01 | 2.33 | 2.55 | 2.38 | 2.5 | 0.004 | 0.61 | 0.0 | 0.04 | 17.88 | 0.00 | 2.035 | 7.98 | 1.80 | 2.9 | 97.1 | 0.0 | 0.99 | 0.77 | 0.85 | 3.75 | 2.5 | 0.003 | 0.54 | 0.0 | 0.04 | 18.19 | 0.00 | 2.189 | 7.26 | 1.41 | 2.6 | 97.4 | 0.0 | 1.49 | 0.29 | 0.75 | 0.86 | 3.77 | 12340 | 1536 | 16 | 0 | 16 | 0 | 0 | logfile |
✔ | 7PE7 | 13347 | 2023-12-08 | 2021-08-09 | 3.41 | 3.76 | — | 3.7 | 0.002 | 0.46 | 0.0 | 0.04 | 9.06 | 0.00 | 2.205 | 4.36 | 0.98 | 3.3 | 96.6 | 0.1 | -0.02 | 0.78 | 0.80 | 1.71 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 14.09 | 0.00 | 2.128 | 7.63 | 0.29 | 4.1 | 95.8 | 0.1 | 0.83 | 0.79 | 0.80 | 0.83 | 1.22 | 58582 | 7664 | 16 | 0 | 6 | 0 | 0 | logfile |
✔ | 7E81 | 31007 | 2023-12-08 | 2021-02-28 | 4.5 | 6.05 | — | 4.7 | 0.007 | 0.83 | 12.0 | 0.05 | 13.14 | 0.00 | 2.027 | 10.57 | 2.21 | 6.7 | 92.7 | 0.6 | -3.63 | 0.65 | 0.66 | — | 4.6 | 0.004 | 0.75 | 0.0 | 0.04 | 12.93 | 0.00 | 2.061 | 26.17 | 0.03 | 3.2 | 96.8 | 0.0 | -0.56 | 1.88 | 0.71 | 0.84 | — | 57178 | 7397 | 68 | 0 | 154 | 0 | 0 | logfile |
✔ | 7Y36 | 33590 | 2023-12-08 | 2022-06-10 | 2.8 | 3.76 | 2.72 | 3.7 | 0.007 | 0.73 | 0.0 | 0.05 | 12.89 | 0.00 | 2.152 | 7.06 | 0.00 | 4.2 | 95.8 | 0.0 | -1.26 | 0.57 | 0.54 | 0.34 | 3.6 | 0.003 | 0.75 | 0.0 | 0.04 | 16.83 | 0.00 | 0.249 | 10.79 | 3.23 | 3.9 | 96.1 | 0.0 | 0.37 | 1.49 | 0.63 | 0.77 | 2.04 | 9206 | 1151 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 8i6Q | 35203 | 2023-12-07 | 2023-01-29 | 4.23 | 7.65 | 4.17 | 4.2 | 0.005 | 0.73 | 0.0 | 0.04 | 6.12 | 0.00 | 2.031 | 15.78 | 0.00 | 7.3 | 92.6 | 0.1 | -1.63 | 0.70 | 0.83 | — | 4.3 | 0.006 | 0.81 | 0.0 | 0.04 | 5.74 | 0.00 | 1.976 | 14.06 | 0.00 | 12.3 | 87.4 | 0.3 | -1.52 | 0.96 | 0.69 | 0.83 | — | 3975 | 810 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E2D | 27832 | 2023-12-09 | 2022-08-15 | 2.07 | 2.27 | 2.16 | 2.3 | 0.003 | 0.56 | 0.0 | 0.04 | 15.75 | 0.00 | 1.968 | 6.49 | 0.85 | 2.0 | 98.0 | 0.0 | 1.44 | 0.63 | 0.82 | 4.02 | 2.3 | 0.003 | 0.53 | 0.0 | 0.04 | 15.85 | 0.00 | 1.976 | 6.85 | 1.17 | 2.3 | 97.7 | 0.0 | 1.86 | 0.38 | 0.64 | 0.83 | 3.94 | 62460 | 3936 | 2 | 0 | 0 | 0 | 31562 | logfile |
✔ | 6REF | 4852 | 2023-12-07 | 2019-04-12 | 3.3 | 3.37 | 3.29 | 3.3 | 0.006 | 0.86 | 0.0 | 0.05 | 14.21 | 0.01 | 2.220 | 5.17 | 0.14 | 4.4 | 95.5 | 0.1 | -3.82 | 0.68 | 0.81 | 2.41 | 3.3 | 0.003 | 0.61 | 0.0 | 0.04 | 15.76 | 0.00 | 1.973 | 10.11 | 0.34 | 3.6 | 96.3 | 0.1 | 0.18 | 1.23 | 0.70 | 0.86 | 2.04 | 53756 | 7104 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 7PHG | 13415 | 2023-12-08 | 2021-08-17 | 4.3 | 4.13 | — | 4.0 | 0.003 | 0.68 | 0.0 | 0.04 | 13.71 | 0.00 | 1.916 | 18.40 | 0.00 | 11.9 | 88.1 | 0.0 | -3.68 | 0.78 | 0.67 | — | 4.0 | 0.003 | 0.66 | 0.0 | 0.04 | 13.35 | 0.00 | 1.961 | 18.86 | 0.00 | 10.0 | 90.0 | 0.0 | -3.49 | 1.26 | 0.77 | 0.66 | — | 6469 | 427 | 3 | 0 | 0 | 0 | 3160 | logfile |
✔ | 7M3N | 23658 | 2023-12-08 | 2021-03-18 | 2.4 | 2.15 | 2.40 | 1.9 | 0.005 | 0.63 | 0.0 | 0.04 | 15.95 | 0.00 | 2.168 | 5.79 | 4.28 | 4.3 | 95.6 | 0.1 | -2.53 | 0.43 | 0.82 | 4.98 | 2.0 | 0.002 | 0.55 | 0.0 | 0.04 | 16.96 | 0.00 | 2.273 | 6.81 | 2.75 | 3.7 | 96.3 | 0.0 | -0.46 | 0.48 | 0.45 | 0.84 | 4.74 | 6004 | 759 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RDi | 4819 | 2023-12-07 | 2019-04-12 | 3.2 | 3.30 | 3.21 | 3.2 | 0.010 | 1.01 | 1.0 | 0.06 | 14.16 | 0.01 | 2.025 | 5.62 | 0.34 | 5.0 | 94.8 | 0.2 | -3.87 | 0.68 | 0.82 | 2.66 | 3.3 | 0.004 | 0.65 | 0.0 | 0.04 | 15.65 | 0.00 | 1.896 | 10.33 | 0.21 | 4.7 | 95.2 | 0.2 | -0.17 | 1.21 | 0.71 | 0.86 | 2.30 | 53748 | 7103 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 6RES | 4855 | 2023-12-07 | 2019-04-12 | 4.3 | 4.30 | — | 4.2 | 0.006 | 0.95 | 0.0 | 0.06 | 15.08 | 0.01 | 1.680 | 8.22 | 0.41 | 6.0 | 93.9 | 0.1 | -5.14 | 0.64 | 0.77 | — | 4.2 | 0.004 | 0.73 | 0.0 | 0.04 | 14.32 | 0.00 | 1.822 | 16.50 | 0.07 | 6.3 | 93.6 | 0.1 | -1.00 | 1.27 | 0.64 | 0.78 | — | 53756 | 7104 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 6S8E | 10119 | 2023-12-09 | 2019-07-09 | 3.1 | 4.08 | 3.34 | 3.7 | 0.006 | 0.75 | 0.0 | 0.05 | 15.49 | 0.00 | 2.055 | 19.34 | 0.16 | 14.8 | 84.9 | 0.2 | -4.68 | 0.79 | 0.77 | 1.91 | 3.8 | 0.004 | 0.84 | 0.0 | 0.05 | 17.21 | 0.00 | 2.025 | 21.37 | 0.75 | 11.3 | 88.7 | 0.0 | -2.52 | 2.38 | 0.76 | 0.81 | 1.42 | 62224 | 7502 | 36 | 91 | 1 | 0 | 0 | logfile |
✔ | 6RDQ | 4827 | 2023-12-07 | 2019-04-12 | 4.0 | 3.99 | — | 3.9 | 0.007 | 0.94 | 0.0 | 0.05 | 15.03 | 0.01 | 1.908 | 6.99 | 0.44 | 5.2 | 94.6 | 0.2 | -4.22 | 0.72 | 0.79 | — | 3.9 | 0.003 | 0.67 | 0.0 | 0.04 | 16.57 | 0.00 | 1.918 | 12.47 | 0.30 | 4.0 | 95.9 | 0.1 | -0.48 | 0.62 | 0.72 | 0.81 | — | 53748 | 7103 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 6RFS | 4874 | 2023-12-09 | 2019-04-16 | 4.04 | 4.52 | — | 4.1 | 0.010 | 1.26 | 0.0 | 0.94 | 10.33 | 0.01 | 2.078 | 8.88 | 0.15 | 8.3 | 91.5 | 0.2 | -4.08 | 0.83 | 0.83 | — | 4.1 | 0.008 | 1.57 | 0.0 | 0.29 | 11.95 | 0.00 | 2.089 | 15.73 | 0.00 | 5.9 | 94.1 | 0.0 | -0.68 | 1.38 | 0.83 | 0.84 | — | 60966 | 7685 | 49 | 0 | 12 | 0 | 0 | logfile |
✔ | 7QCL | 13896 | 2023-12-09 | 2021-11-24 | 3.36 | 4.15 | — | 3.5 | 0.011 | 1.78 | 27.0 | 0.12 | 16.99 | 0.04 | 1.816 | 36.26 | 6.66 | 9.9 | 90.0 | 0.1 | -1.87 | 0.76 | 0.57 | 2.37 | 3.5 | 0.003 | 0.88 | 0.0 | 0.05 | 14.76 | 0.00 | 2.177 | 12.60 | 0.41 | 9.1 | 90.9 | 0.0 | -1.18 | 1.42 | 0.87 | 0.81 | 2.65 | 9884 | 1092 | 18 | 0 | 127 | 0 | 0 | logfile |
✔ | 7UKG | 26580 | 2023-12-08 | 2022-04-01 | 2.24 | 2.56 | 2.27 | 2.5 | 0.006 | 0.58 | 0.0 | 0.04 | 13.16 | 0.00 | 2.208 | 6.08 | 0.00 | 1.8 | 98.2 | 0.0 | 2.95 | 0.68 | 0.88 | 4.70 | 2.5 | 0.003 | 0.48 | 0.0 | 0.04 | 13.81 | 0.00 | 2.354 | 5.86 | 0.22 | 1.8 | 98.2 | 0.0 | 3.84 | 0.22 | 0.70 | 0.90 | 4.29 | 8652 | 1128 | 10 | 0 | 4 | 0 | 0 | logfile |
✔ | 8Q3F | 18126 | 2023-12-07 | 2023-08-04 | 3.77 | 4.64 | 3.79 | 4.2 | 0.005 | 1.12 | 0.0 | 0.07 | 15.05 | 0.01 | 2.339 | 3.11 | 0.00 | 3.1 | 96.9 | 0.0 | -5.05 | 0.90 | 0.81 | 0.79 | 4.2 | 0.002 | 0.57 | 0.0 | 0.04 | 15.72 | 0.00 | 2.295 | 6.74 | 0.20 | 2.8 | 97.2 | 0.0 | 1.32 | 0.93 | 0.90 | 0.82 | 0.86 | 4599 | 578 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SQU | 40713 | 2023-12-08 | 2023-05-04 | 3.28 | 4.37 | 3.34 | 4.0 | 0.003 | 0.63 | 0.0 | 0.05 | 17.81 | 0.00 | 1.967 | 11.66 | 0.00 | 6.3 | 93.7 | 0.0 | -0.59 | 0.75 | 0.62 | 1.04 | 4.0 | 0.003 | 0.71 | 0.0 | 0.04 | 19.64 | 0.00 | 1.972 | 15.50 | 0.27 | 5.9 | 94.1 | 0.0 | -0.14 | 2.15 | 0.78 | 0.69 | 1.42 | 7761 | 841 | 5 | 41 | 1 | 0 | 0 | logfile |
✔ | 7V4L | 31715 | 2023-12-08 | 2021-08-13 | 3.4 | 3.80 | — | 3.8 | 0.005 | 0.82 | 1.0 | 0.06 | 15.20 | 0.01 | 2.102 | 18.13 | 3.71 | 8.8 | 90.6 | 0.5 | -2.60 | 0.55 | 0.55 | 1.34 | 3.8 | 0.003 | 0.72 | 0.0 | 0.05 | 16.09 | 0.01 | 2.154 | 17.48 | 0.49 | 6.7 | 93.2 | 0.1 | -2.54 | 0.75 | 0.58 | 0.61 | 1.26 | 9345 | 1190 | 5 | 0 | 0 | 0 | 0 | logfile |