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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8EXP | 28658 | 2023-07-05 | 2022-10-25 | 4.2 | 4.47 | 4.29 | 4.6 | 0.019 | 1.74 | 0.0 | 0.10 | 10.69 | 0.01 | 2.031 | 5.52 | 0.60 | 3.4 | 96.4 | 0.2 | -0.04 | 0.53 | 0.43 | — | 4.6 | 0.003 | 0.70 | 0.0 | 0.04 | 13.28 | 0.00 | 2.061 | 14.99 | 0.00 | 4.7 | 95.3 | 0.0 | 0.30 | 1.14 | 0.64 | 0.70 | — | 9024 | 1078 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7AP9 | 11851 | 2023-07-14 | 2020-10-16 | 3.01 | 3.70 | — | 3.2 | 0.008 | 0.68 | 0.0 | 0.05 | 12.00 | 0.00 | 2.023 | 4.33 | 2.91 | 6.9 | 93.1 | 0.0 | -0.45 | 0.90 | 0.88 | 3.79 | 3.2 | 0.004 | 0.61 | 0.0 | 0.04 | 13.63 | 0.00 | 2.030 | 7.49 | 0.14 | 6.1 | 93.9 | 0.0 | 0.37 | 0.53 | 0.90 | 0.89 | 3.35 | 30881 | 3782 | 14 | 11 | 5 | 0 | 0 | logfile |
✔ | 7YZo | 14391 | 2023-07-08 | 2022-02-21 | 3.4 | 3.53 | 3.40 | 3.5 | 0.004 | 0.70 | 0.0 | 0.04 | 17.64 | 0.00 | 1.498 | 5.76 | 0.08 | 3.2 | 96.8 | 0.0 | 0.79 | 0.80 | 0.83 | 2.80 | 3.5 | 0.005 | 0.62 | 0.0 | 0.04 | 19.10 | 0.00 | 1.880 | 8.47 | 0.47 | 3.7 | 96.3 | 0.0 | 0.07 | 0.36 | 0.82 | 0.85 | 2.45 | 13068 | 1497 | 10 | 62 | 8 | 0 | 0 | logfile |
✔ | 7KEJ | 22839 | 2023-07-07 | 2020-10-11 | 3.8 | 3.55 | — | 3.6 | 0.021 | 1.73 | 0.0 | 0.11 | 10.03 | 0.01 | 1.201 | 0.59 | 0.00 | 0.4 | 99.6 | 0.0 | 1.20 | 0.82 | 0.84 | 4.49 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 14.71 | 0.00 | 2.126 | 6.60 | 0.41 | 2.0 | 98.0 | 0.0 | 0.01 | 1.66 | 0.82 | 0.83 | 3.57 | 13806 | 1740 | 18 | 0 | 24 | 0 | 0 | logfile |
✔ | 5W1R | 8751 | 2023-07-12 | 2017-06-04 | 4.4 | 4.48 | — | 4.4 | 0.006 | 1.21 | 2.0 | 0.06 | 14.97 | 0.01 | 1.238 | 42.66 | 1.30 | 15.6 | 79.1 | 5.4 | -5.31 | 0.66 | 0.69 | — | 4.4 | 0.003 | 0.91 | 0.0 | 0.04 | 13.29 | 0.01 | 2.114 | 13.00 | 0.04 | 9.3 | 89.9 | 0.7 | -1.87 | 1.91 | 0.66 | 0.69 | — | 25559 | 3563 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JV6 | 22494 | 2023-07-12 | 2020-08-20 | 3.0 | 3.20 | 3.11 | 3.2 | 0.014 | 1.41 | 0.0 | 0.09 | 10.09 | 0.01 | 2.402 | 0.75 | 0.00 | 2.8 | 97.2 | 0.0 | 0.65 | 0.71 | 0.72 | 3.26 | 3.1 | 0.004 | 0.63 | 0.0 | 0.05 | 14.65 | 0.00 | 2.187 | 6.66 | 3.09 | 3.1 | 96.9 | 0.0 | 0.00 | 0.63 | 0.76 | 0.79 | 2.82 | 26648 | 3612 | 24 | 0 | 60 | 0 | 0 | logfile |
✔ | 6F2D | 4173 | 2023-07-06 | 2017-11-24 | 4.2 | 4.27 | 4.05 | 4.1 | 0.010 | 1.19 | 0.0 | 0.05 | 9.30 | 0.01 | 2.023 | 26.29 | 0.51 | 16.3 | 83.0 | 0.7 | -6.32 | 0.71 | 0.72 | — | 4.1 | 0.003 | 0.89 | 0.0 | 0.04 | 13.03 | 0.01 | 2.125 | 12.83 | 0.00 | 7.7 | 91.7 | 0.6 | 0.23 | 2.03 | 0.75 | 0.77 | — | 12541 | 1629 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Lo8 | 0935 | 2023-07-04 | 2020-01-04 | 3.83 | 3.89 | — | 3.6 | 0.005 | 0.87 | 0.0 | 0.05 | 14.88 | 0.01 | 2.242 | 5.11 | 0.46 | 3.7 | 96.1 | 0.2 | -3.08 | 0.65 | 0.79 | 1.72 | 3.6 | 0.004 | 0.83 | 0.0 | 0.04 | 17.18 | 0.00 | 2.116 | 14.07 | 0.57 | 5.0 | 95.0 | 0.0 | 1.41 | 0.93 | 0.66 | 0.79 | 1.78 | 7972 | 997 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6B3o | 7040 | 2023-07-04 | 2017-09-22 | 4.1 | 4.04 | — | 4.1 | 0.024 | 1.82 | 0.0 | 0.11 | 10.99 | 0.01 | 2.285 | 2.28 | 0.34 | 2.1 | 97.6 | 0.3 | 1.14 | 0.69 | 0.76 | — | 4.0 | 0.005 | 0.75 | 0.0 | 0.04 | 14.24 | 0.00 | 2.119 | 10.89 | 0.00 | 4.7 | 95.0 | 0.3 | 0.76 | 1.67 | 0.71 | 0.77 | — | 7980 | 1032 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 5ZR1 | 6941 | 2023-07-10 | 2018-04-21 | 3.0 | 3.18 | — | 3.1 | 0.007 | 1.04 | 2.0 | 0.06 | 15.46 | 0.01 | 2.050 | 4.08 | 0.65 | 4.3 | 95.7 | 0.0 | -5.16 | 0.77 | 0.84 | 3.94 | 3.1 | 0.005 | 0.65 | 0.0 | 0.04 | 18.51 | 0.00 | 1.851 | 7.81 | 2.34 | 3.8 | 96.2 | 0.0 | -0.31 | 1.59 | 0.75 | 0.86 | 3.09 | 22260 | 2509 | 11 | 82 | 6 | 0 | 0 | logfile |
✔ | 6DZM | 8936 | 2023-07-07 | 2018-07-05 | 4.29 | 4.66 | — | 4.3 | 0.008 | 0.96 | 0.0 | 0.05 | 9.60 | 0.01 | 2.058 | 8.59 | 0.00 | 13.6 | 86.4 | 0.0 | -4.76 | 0.77 | 0.80 | — | 4.3 | 0.003 | 0.76 | 0.0 | 0.05 | 12.09 | 0.00 | 2.177 | 14.52 | 0.00 | 8.9 | 91.1 | 0.0 | -1.87 | 0.98 | 0.78 | 0.83 | — | 13584 | 1695 | 24 | 0 | 27 | 0 | 0 | logfile |
✔ | 7RHZ | 24472 | 2023-07-06 | 2021-07-19 | 4.48 | 7.32 | 5.01 | 7.0 | 0.020 | 1.62 | 32.0 | 0.18 | 21.07 | 0.01 | 2.015 | 9.11 | 0.59 | 3.5 | 96.5 | 0.0 | -1.60 | 0.85 | 0.71 | — | 7.0 | 0.004 | 0.65 | 0.0 | 0.04 | 21.35 | 0.00 | 2.012 | 13.15 | 0.00 | 4.8 | 95.2 | 0.0 | 0.40 | 1.31 | 0.88 | 0.77 | — | 12550 | 615 | 4 | 88 | 0 | 0 | 5875 | logfile |
✔ | 6PCi | 20301 | 2023-07-09 | 2019-06-17 | 4.12 | 4.25 | — | 4.1 | 0.009 | 1.05 | 0.0 | 0.06 | 8.96 | 0.01 | 2.268 | 6.36 | 0.00 | 6.8 | 93.2 | 0.0 | -2.72 | 0.85 | 0.84 | — | 4.1 | 0.004 | 0.73 | 0.0 | 0.05 | 12.81 | 0.00 | 2.112 | 17.12 | 0.05 | 6.5 | 93.5 | 0.0 | -0.84 | 0.84 | 0.85 | 0.84 | — | 18828 | 2382 | 24 | 0 | 27 | 0 | 0 | logfile |
✔ | 7YZP | 14393 | 2023-07-09 | 2022-02-21 | 4.0 | 4.15 | 4.02 | 4.0 | 0.003 | 0.62 | 1.0 | 0.04 | 17.63 | 0.00 | 1.593 | 8.32 | 0.00 | 4.2 | 95.8 | 0.0 | 0.73 | 0.83 | 0.78 | — | 4.0 | 0.002 | 0.63 | 0.0 | 0.04 | 19.11 | 0.00 | 2.004 | 11.08 | 0.07 | 3.8 | 96.2 | 0.0 | 0.76 | 0.37 | 0.84 | 0.79 | — | 14107 | 1633 | 9 | 59 | 8 | 0 | 0 | logfile |
✔ | 6H3L | 0135 | 2023-07-13 | 2018-07-19 | 4.2 | 4.88 | — | 3.9 | 0.015 | 1.70 | 0.0 | 0.08 | 11.55 | 0.01 | 2.124 | 5.25 | 0.06 | 7.7 | 91.4 | 0.9 | -1.43 | 0.92 | 0.69 | — | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 13.27 | 0.00 | 1.891 | 16.48 | 0.00 | 6.8 | 93.0 | 0.2 | -1.95 | 1.34 | 0.91 | 0.76 | — | 29319 | 1881 | 3 | 0 | 0 | 0 | 14388 | logfile |
✔ | 6VX6 | 21431 | 2023-07-07 | 2020-02-21 | 3.0 | 3.24 | — | 3.2 | 0.005 | 0.82 | 0.0 | 0.05 | 14.09 | 0.00 | 2.260 | 4.77 | 0.94 | 1.9 | 98.1 | 0.0 | -5.69 | 0.76 | 0.87 | 3.72 | 3.2 | 0.003 | 0.61 | 0.0 | 0.04 | 16.35 | 0.00 | 2.069 | 7.45 | 1.38 | 1.4 | 98.6 | 0.0 | 0.77 | 0.98 | 0.77 | 0.89 | 3.36 | 15061 | 1830 | 10 | 0 | 6 | 0 | 0 | logfile |
✔ | 6Fo1 | 4287 | 2023-07-08 | 2018-02-05 | 3.57 | 3.71 | — | 3.6 | 0.007 | 0.82 | 0.0 | 0.04 | 10.81 | 0.00 | 2.039 | 23.07 | 0.06 | 6.1 | 93.9 | 0.1 | -3.76 | 0.83 | 0.85 | 2.87 | 3.6 | 0.003 | 0.69 | 0.0 | 0.04 | 15.43 | 0.00 | 2.201 | 9.81 | 0.30 | 3.4 | 96.5 | 0.1 | 0.44 | 0.79 | 0.83 | 0.84 | 2.15 | 15645 | 2012 | 13 | 0 | 6 | 0 | 0 | logfile |
✔ | 6V9Q | 21126 | 2023-07-13 | 2019-12-15 | 2.9 | 3.05 | — | 3.0 | 0.008 | 1.12 | 1.0 | 0.07 | 12.82 | 0.01 | 2.040 | 9.79 | 1.56 | 6.5 | 93.4 | 0.1 | -4.27 | 0.76 | 0.83 | 3.71 | 3.0 | 0.006 | 0.75 | 0.0 | 0.05 | 16.98 | 0.01 | 2.101 | 8.90 | 3.38 | 6.2 | 93.8 | 0.0 | -0.56 | 1.72 | 0.75 | 0.86 | 3.27 | 28090 | 3337 | 13 | 61 | 4 | 0 | 0 | logfile |
✘ | 6PM5 | 20388 | 2023-07-07 | 2019-07-01 | 3.1 | 3.38 | — | 3.4 | 0.002 | 0.49 | 0.0 | 0.06 | 6.82 | 0.00 | 2.275 | 4.99 | 0.00 | 2.4 | 97.6 | 0.0 | -4.42 | 0.52 | 0.78 | 3.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13975 | 1735 | 15 | 0 | 15 | 0 | 0 | logfile |
✔ | 7JW0 | 22512 | 2023-07-12 | 2020-08-24 | 4.3 | 4.63 | 4.41 | 4.4 | 0.010 | 1.54 | 6.0 | 0.10 | 8.01 | 0.01 | 2.527 | 0.37 | 0.00 | 2.3 | 97.5 | 0.1 | 1.05 | 0.81 | 0.71 | — | 4.4 | 0.003 | 0.64 | 0.0 | 0.05 | 9.97 | 0.00 | 2.180 | 5.50 | 0.00 | 3.4 | 96.6 | 0.0 | 0.41 | 1.28 | 0.85 | 0.79 | — | 26251 | 4314 | 27 | 0 | 69 | 0 | 0 | logfile |