The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5ADX | 2856 | 2024-03-25 | 2015-08-24 | 4.0 | 4.18 | — | 4.0 | 0.008 | 1.05 | 1.0 | 0.06 | 12.82 | 0.00 | 1.155 | 3.43 | 1.97 | 6.3 | 93.5 | 0.3 | -2.81 | 0.77 | 0.63 | — | 4.0 | 0.004 | 0.70 | 0.0 | 0.04 | 14.94 | 0.00 | 2.114 | 11.50 | 2.58 | 5.1 | 94.9 | 0.0 | -0.62 | 0.91 | 0.86 | 0.79 | — | 49392 | 4737 | 27 | 0 | 2569 | 0 | 0 | logfile |
✔ | 5ADY | 3133 | 2024-03-20 | 2015-08-25 | 4.5 | 4.75 | — | 4.5 | 0.011 | 1.28 | 0.0 | 0.06 | 24.87 | 0.01 | 1.391 | 57.89 | 0.21 | 11.7 | 81.7 | 6.7 | -3.35 | 0.72 | 0.63 | — | 4.5 | 0.003 | 0.66 | 0.0 | 0.03 | 23.62 | 0.00 | 1.907 | 21.64 | 0.00 | 10.2 | 88.8 | 1.1 | -2.78 | 1.12 | 0.86 | 0.83 | — | 97364 | 4197 | 35 | 3020 | 2 | 0 | 0 | logfile |
✔ | 5AEY | 2850 | 2024-03-15 | 2015-01-12 | 4.3 | 4.01 | — | 4.0 | 0.011 | 1.71 | 35.0 | 0.11 | 22.05 | 0.01 | 2.197 | 7.01 | 18.45 | 8.7 | 88.5 | 2.8 | -3.27 | 0.64 | 0.81 | — | 3.9 | 0.003 | 0.75 | 0.0 | 0.04 | 15.48 | 0.00 | 2.126 | 16.08 | 0.00 | 10.1 | 89.6 | 0.3 | -1.46 | 2.59 | 0.63 | 0.77 | — | 12675 | 1590 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 5AJ3 | 2913 | 2024-03-13 | 2015-02-20 | 3.6 | 3.73 | — | 3.7 | 0.018 | 1.28 | 0.0 | 0.05 | 21.86 | 0.07 | 1.844 | 24.00 | 10.71 | 3.9 | 96.0 | 0.1 | -3.65 | 0.86 | 0.86 | 2.03 | 3.6 | 0.006 | 1.43 | 0.0 | 0.04 | 22.13 | 0.02 | 1.749 | 16.85 | 4.69 | 5.2 | 94.8 | 0.0 | -0.15 | 1.63 | 0.84 | 0.83 | 1.64 | 66363 | 4665 | 44 | 1102 | 1006 | 118 | 0 | logfile |
✔ | 5AN9 | 3145 | 2024-03-24 | 2015-09-06 | 3.3 | 3.29 | — | 3.3 | 0.007 | 1.22 | 5.0 | 0.10 | 23.20 | 0.01 | 1.192 | 3.54 | 2.32 | 9.1 | 88.0 | 2.9 | -3.68 | 0.38 | 0.81 | 1.98 | 3.3 | 0.005 | 0.75 | 0.0 | 0.04 | 23.17 | 0.01 | 2.033 | 12.82 | 5.20 | 10.4 | 89.1 | 0.5 | -2.65 | 0.71 | 0.39 | 0.80 | 1.10 | 39693 | 1905 | 11 | 1162 | 0 | 0 | 0 | logfile |
✔ | 5ANB | 3146 | 2024-03-25 | 2015-09-06 | 4.1 | 4.11 | — | 4.1 | 0.008 | 1.32 | 6.0 | 0.10 | 23.47 | 0.01 | 1.245 | 5.12 | 4.33 | 13.0 | 83.9 | 3.1 | -4.17 | 0.41 | 0.75 | — | 4.0 | 0.006 | 0.92 | 0.0 | 0.05 | 22.56 | 0.01 | 2.037 | 24.67 | 0.04 | 15.9 | 83.4 | 0.7 | -3.72 | 2.09 | 0.39 | 0.71 | — | 48493 | 3025 | 12 | 1162 | 0 | 0 | 0 | logfile |
✔ | 5ANC | 3147 | 2024-03-25 | 2015-09-06 | 4.2 | 4.23 | — | 4.2 | 0.008 | 1.35 | 7.0 | 0.10 | 23.79 | 0.01 | 1.236 | 6.62 | 4.21 | 13.6 | 82.7 | 3.6 | -4.33 | 0.41 | 0.74 | — | 4.2 | 0.005 | 0.88 | 0.0 | 0.04 | 22.59 | 0.01 | 2.019 | 22.28 | 0.00 | 13.7 | 85.3 | 0.9 | -3.79 | 1.57 | 0.39 | 0.70 | — | 46807 | 2801 | 11 | 1162 | 0 | 0 | 0 | logfile |
✘ | 5BK4 | 9400 | 2024-03-12 | 2017-09-12 | 3.9 | 4.14 | — | 4.1 | 0.008 | 1.24 | 0.0 | 0.06 | 14.59 | 0.01 | 2.234 | 5.12 | 1.24 | 12.2 | 87.6 | 0.2 | -4.81 | 0.81 | 0.79 | 2.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 62482 | 7636 | 22 | 120 | 8 | 0 | 0 | logfile |
✔ | 5BKF | 9403 | 2024-03-16 | 2021-03-19 | 3.6 | 3.87 | — | 4.0 | 0.004 | 0.54 | 0.0 | 0.04 | 14.14 | 0.00 | 2.015 | 7.17 | 0.35 | 6.2 | 93.8 | 0.0 | -3.64 | 0.66 | 0.81 | 2.57 | 3.9 | 0.003 | 0.67 | 0.0 | 0.04 | 15.72 | 0.00 | 2.218 | 11.72 | 2.70 | 3.3 | 96.7 | 0.0 | -0.20 | 1.30 | 0.67 | 0.83 | 2.39 | 13470 | 1694 | 10 | 0 | 9 | 0 | 0 | logfile |
✔ | 5BKG | 9404 | 2024-03-16 | 2021-03-19 | 3.8 | 3.93 | — | 4.0 | 0.004 | 0.58 | 0.0 | 0.04 | 12.91 | 0.00 | 2.044 | 8.32 | 0.21 | 6.2 | 93.8 | 0.0 | -3.60 | 0.68 | 0.82 | 2.85 | 4.0 | 0.004 | 0.70 | 0.0 | 0.04 | 15.73 | 0.00 | 2.048 | 11.34 | 3.64 | 4.4 | 95.6 | 0.0 | -0.52 | 0.61 | 0.70 | 0.85 | 2.07 | 13509 | 1689 | 10 | 0 | 9 | 0 | 0 | logfile |
✔ | 5BKi | 9405 | 2024-03-17 | 2021-03-19 | 3.1 | 3.21 | — | 3.2 | 0.010 | 1.04 | 0.0 | 0.06 | 15.84 | 0.01 | 2.252 | 4.46 | 0.44 | 5.4 | 94.6 | 0.0 | -5.10 | 0.70 | 0.85 | 3.65 | 3.2 | 0.003 | 0.53 | 0.0 | 0.05 | 16.15 | 0.00 | 2.133 | 5.79 | 0.93 | 3.3 | 96.7 | 0.0 | 0.10 | 1.60 | 0.65 | 0.85 | 2.69 | 16933 | 2156 | 20 | 0 | 21 | 4 | 0 | logfile |
✘ | 5BKJ | 9406 | 2024-03-17 | 2021-03-19 | 3.5 | 3.68 | — | 3.7 | 0.006 | 0.81 | 0.0 | 0.06 | 15.41 | 0.00 | 2.251 | 5.00 | 1.09 | 4.1 | 95.9 | 0.0 | -3.93 | 0.69 | 0.84 | 2.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16939 | 2156 | 16 | 0 | 7 | 4 | 0 | logfile |
✔ | 5BKK | 9407 | 2024-03-17 | 2021-03-19 | 3.5 | 3.17 | — | 3.5 | 0.004 | 0.72 | 0.0 | 0.05 | 14.93 | 0.00 | 2.242 | 5.39 | 0.11 | 3.5 | 96.5 | 0.0 | -4.88 | 0.68 | 0.82 | 2.52 | 3.5 | 0.003 | 0.57 | 0.0 | 0.05 | 16.53 | 0.00 | 2.131 | 8.79 | 2.18 | 3.6 | 96.4 | 0.0 | -0.79 | 1.20 | 0.63 | 0.81 | 2.06 | 16831 | 2156 | 11 | 0 | 6 | 0 | 0 | logfile |
✔ | 5FJ8 | 3178 | 2024-03-24 | 2015-10-06 | 3.9 | 3.97 | — | 4.0 | 0.004 | 1.21 | 0.0 | 0.04 | 13.73 | 0.00 | 2.035 | 13.90 | 4.05 | 16.0 | 82.9 | 1.1 | -4.73 | 0.70 | 0.69 | 0.95 | 3.9 | 0.004 | 0.91 | 0.0 | 0.05 | 17.43 | 0.01 | 1.955 | 15.23 | 4.85 | 13.7 | 84.9 | 1.3 | -2.88 | 0.99 | 0.76 | 0.77 | 1.11 | 39284 | 4804 | 25 | 47 | 41 | 0 | 0 | logfile |
✔ | 5FJ9 | 3179 | 2024-03-23 | 2015-10-06 | 4.6 | 4.67 | — | 4.6 | 0.004 | 1.21 | 0.0 | 0.05 | 12.45 | 0.00 | 1.842 | 13.04 | 4.04 | 16.0 | 82.8 | 1.1 | -4.61 | 0.80 | 0.72 | — | 4.6 | 0.003 | 0.90 | 0.0 | 0.05 | 13.51 | 0.01 | 1.931 | 16.43 | 0.05 | 12.6 | 86.4 | 1.0 | -2.46 | 2.55 | 0.83 | 0.78 | — | 38680 | 4845 | 22 | 0 | 41 | 0 | 0 | logfile |
✔ | 5FLM | 3218 | 2024-03-22 | 2015-10-26 | 3.4 | 3.52 | — | 3.5 | 0.004 | 0.74 | 0.0 | 0.05 | 11.66 | 0.00 | 2.034 | 14.71 | 0.00 | 5.1 | 94.9 | 0.0 | -2.61 | 0.51 | 0.66 | 2.61 | 3.5 | 0.004 | 0.64 | 0.0 | 0.04 | 16.19 | 0.00 | 2.003 | 9.36 | 2.63 | 5.1 | 94.8 | 0.1 | 0.15 | 1.52 | 0.68 | 0.84 | 1.71 | 32712 | 3896 | 21 | 80 | 9 | 0 | 0 | logfile |
✔ | 5FLU | 3222 | 2024-03-16 | 2015-10-28 | 3.8 | 3.50 | — | 3.4 | 0.009 | 0.93 | 0.0 | 0.05 | 12.31 | 0.01 | 2.213 | 3.04 | 0.00 | 8.7 | 90.1 | 1.2 | -2.36 | 0.72 | 0.64 | 0.95 | 3.3 | 0.004 | 0.72 | 0.0 | 0.04 | 15.78 | 0.00 | 2.134 | 13.62 | 3.78 | 5.7 | 94.3 | 0.0 | -0.06 | 1.38 | 0.77 | 0.79 | 1.88 | 15132 | 2119 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 5FLX | 3221 | 2024-03-17 | 2015-10-28 | 3.9 | 4.33 | — | 4.3 | 0.003 | 0.71 | 3.0 | 0.05 | 21.37 | 0.00 | 0.894 | 15.92 | 0.19 | 6.8 | 92.6 | 0.6 | -2.97 | 0.42 | 0.58 | 0.37 | 4.2 | 0.003 | 0.76 | 0.0 | 0.04 | 22.79 | 0.01 | 1.866 | 21.86 | 4.80 | 8.7 | 90.8 | 0.5 | -1.51 | 1.50 | 0.47 | 0.80 | 0.51 | 80592 | 4810 | 40 | 1972 | 76 | 0 | 0 | logfile |
✔ | 5FMG | 3231 | 2024-03-23 | 2015-11-04 | 3.6 | 3.39 | — | 3.4 | 0.012 | 1.50 | 0.0 | 0.06 | 9.53 | 0.01 | 2.110 | 20.79 | 0.29 | 5.1 | 93.8 | 1.1 | -2.35 | 0.66 | 0.69 | 2.91 | 3.4 | 0.003 | 0.70 | 0.0 | 0.04 | 14.93 | 0.00 | 2.084 | 14.46 | 4.63 | 3.2 | 96.8 | 0.0 | -0.24 | 1.65 | 0.69 | 0.71 | 1.46 | 39334 | 5716 | 30 | 0 | 2 | 0 | 0 | logfile |
✔ | 5FN1 | 3236 | 2024-03-12 | 2015-11-10 | 3.9 | 4.00 | — | 4.7 | 0.009 | 1.18 | 0.0 | 0.07 | 12.98 | 0.00 | 0.877 | 53.81 | 0.00 | 8.8 | 88.4 | 2.8 | -3.37 | 0.24 | 0.29 | 0.57 | 4.0 | 0.005 | 0.96 | 2.0 | 0.04 | 17.65 | 0.01 | 1.782 | 22.59 | 2.79 | 10.8 | 88.1 | 1.1 | -0.99 | 2.12 | 0.40 | 0.74 | 1.09 | 61308 | 3906 | 36 | 90 | 0 | 0 | 30078 | logfile |