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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6LBH | 0869 | 2023-02-19 | 2019-11-14 | 3.7 | 3.79 | — | 3.8 | 0.006 | 0.82 | 0.0 | 0.05 | 13.62 | 0.00 | 2.079 | 18.56 | 0.20 | 7.7 | 92.2 | 0.2 | -2.87 | 0.75 | 0.83 | 2.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9219 | 1236 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N3C | 0334 | 2023-02-17 | 2018-11-14 | 3.3 | 3.53 | — | 3.5 | 0.009 | 1.31 | 0.0 | 0.07 | 14.00 | 0.00 | 2.387 | 18.47 | 0.00 | 11.5 | 88.5 | 0.0 | -5.01 | 0.52 | 0.83 | 4.06 | 3.5 | 0.005 | 0.71 | 0.0 | 0.04 | 15.41 | 0.00 | 2.401 | 13.69 | 1.32 | 11.3 | 88.7 | 0.0 | -3.70 | 2.40 | 0.52 | 0.83 | 3.98 | 4260 | 640 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZGJ | 11208 | 2023-02-20 | 2020-06-18 | 3.4 | 3.39 | 3.34 | 3.5 | 0.005 | 0.61 | 0.0 | 0.04 | 12.36 | 0.00 | 2.192 | 9.66 | 0.00 | 6.3 | 93.7 | 0.0 | -1.35 | 0.69 | 0.79 | 3.10 | 3.5 | 0.003 | 0.58 | 0.0 | 0.04 | 14.28 | 0.00 | 2.228 | 6.59 | 0.18 | 5.7 | 94.3 | 0.0 | -0.56 | 0.42 | 0.71 | 0.85 | 2.51 | 11555 | 1540 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TMQ | 25999 | 2023-02-28 | 2022-01-19 | 3.3 | 3.42 | — | 3.4 | 0.004 | 0.57 | 2.0 | 0.04 | 12.67 | 0.00 | 2.026 | 9.95 | 0.38 | 2.7 | 97.3 | 0.0 | 1.28 | 0.77 | 0.83 | 3.33 | 3.4 | 0.004 | 0.54 | 0.0 | 0.04 | 13.96 | 0.00 | 1.947 | 9.19 | 0.38 | 2.9 | 97.1 | 0.0 | 1.25 | 0.27 | 0.79 | 0.86 | 2.79 | 31642 | 4736 | 16 | 0 | 2 | 0 | 0 | logfile |
✘ | 7D44 | 30569 | 2023-02-26 | 2020-09-22 | 4.0 | 4.14 | — | 4.0 | 0.006 | 0.86 | 0.0 | 0.05 | 14.78 | 0.00 | 2.049 | 20.50 | 0.28 | 16.3 | 83.6 | 0.1 | -5.25 | 0.80 | 0.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28391 | 3825 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R5M | 14331 | 2023-02-20 | 2022-02-11 | 3.3 | 3.09 | 3.20 | 3.2 | 0.006 | 0.94 | 0.0 | 0.06 | 14.64 | 0.00 | 2.411 | 1.26 | 0.80 | 4.6 | 95.4 | 0.0 | -0.79 | 0.70 | 0.80 | 2.46 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 16.00 | 0.00 | 2.111 | 3.04 | 0.08 | 1.6 | 98.4 | 0.0 | 1.73 | 1.36 | 0.70 | 0.86 | 2.07 | 11295 | 1491 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 5FN1 | 3236 | 2023-02-23 | 2015-11-10 | 3.9 | 4.00 | — | 4.7 | 0.009 | 1.18 | 0.0 | 0.07 | 11.47 | 0.00 | 0.877 | 53.81 | 0.00 | 8.8 | 88.4 | 2.8 | -3.37 | 0.24 | 0.29 | 0.57 | 3.9 | 0.005 | 0.87 | 0.0 | 0.04 | 16.79 | 0.01 | 1.856 | 24.08 | 1.08 | 13.3 | 85.7 | 1.0 | -1.33 | 2.15 | 0.41 | 0.75 | 0.99 | 61308 | 3906 | 36 | 90 | 0 | 0 | 30078 | logfile |
✔ | 6V6B | 21067 | 2023-02-19 | 2019-12-04 | 3.8 | 3.96 | — | 3.9 | 0.005 | 0.55 | 0.0 | 0.04 | 14.36 | 0.00 | 2.211 | 5.33 | 0.00 | 5.1 | 94.9 | 0.0 | -5.29 | 0.54 | 0.84 | 1.85 | 3.9 | 0.003 | 0.61 | 0.0 | 0.04 | 16.91 | 0.00 | 2.139 | 6.54 | 0.20 | 3.4 | 96.6 | 0.1 | -0.41 | 0.59 | 0.53 | 0.83 | 0.72 | 9115 | 1111 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7E0F | 30931 | 2023-02-16 | 2021-01-27 | 3.02 | 3.18 | — | 3.5 | 0.016 | 0.99 | 0.0 | 0.07 | 15.88 | 0.00 | 2.341 | 9.76 | 0.00 | 12.8 | 87.2 | 0.0 | -5.10 | 0.39 | 0.81 | 5.04 | 3.4 | 0.004 | 0.64 | 0.0 | 0.05 | 16.57 | 0.00 | 2.397 | 4.15 | 0.49 | 7.8 | 92.2 | 0.0 | -3.39 | 1.23 | 0.39 | 0.80 | 3.92 | 2022 | 294 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SSX | 10307 | 2023-02-17 | 2019-09-09 | 2.98 | 3.11 | — | 3.1 | 0.008 | 0.94 | 0.0 | 0.07 | 14.94 | 0.00 | 2.424 | 6.14 | 4.26 | 12.6 | 87.4 | 0.0 | -4.73 | 0.65 | 0.82 | 4.81 | 3.0 | 0.008 | 0.80 | 0.0 | 0.06 | 16.95 | 0.00 | 2.222 | 13.38 | 4.47 | 13.2 | 86.8 | 0.0 | -5.14 | 0.77 | 0.65 | 0.86 | 4.75 | 4900 | 730 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ELB | 31179 | 2023-02-27 | 2021-04-09 | 4.1 | 4.43 | — | 4.1 | 0.002 | 0.59 | 0.0 | 0.04 | 13.34 | 0.00 | 2.021 | 9.17 | 2.07 | 8.6 | 91.4 | 0.0 | -3.36 | 0.80 | 0.69 | — | 4.1 | 0.003 | 0.76 | 0.0 | 0.04 | 13.20 | 0.00 | 2.129 | 14.42 | 0.03 | 9.4 | 90.5 | 0.0 | -1.36 | 1.50 | 0.83 | 0.74 | — | 31012 | 3972 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 7M61 | 23686 | 2023-02-16 | 2021-03-25 | 3.8 | 3.83 | — | 4.1 | 0.005 | 1.01 | 0.0 | 0.08 | 12.79 | 0.00 | 2.218 | 22.02 | 0.00 | 14.3 | 85.7 | 0.0 | -4.63 | 0.49 | 0.73 | 2.45 | 3.9 | 0.004 | 0.80 | 0.0 | 0.05 | 14.85 | 0.00 | 2.106 | 21.09 | 0.00 | 14.3 | 85.7 | 0.0 | -4.66 | 0.84 | 0.48 | 0.75 | 2.97 | 1690 | 230 | 10 | 0 | 10 | 0 | 0 | logfile |
✘ | 5GW4 | 9540 | 2023-02-24 | 2016-09-08 | 4.7 | 4.89 | — | 4.8 | 0.001 | 0.42 | 0.0 | 0.04 | 7.26 | 0.00 | 2.187 | 6.49 | 0.00 | 4.3 | 95.6 | 0.1 | -3.58 | 0.77 | 0.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64544 | 8446 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K3B | 22655 | 2023-02-23 | 2020-09-10 | 3.4 | 3.49 | — | 3.4 | 0.008 | 0.68 | 0.0 | 0.05 | 12.66 | 0.00 | 2.155 | 8.62 | 0.00 | 4.8 | 95.2 | 0.0 | -0.19 | 0.82 | 0.85 | 3.08 | 3.4 | 0.003 | 0.63 | 0.0 | 0.05 | 14.92 | 0.00 | 2.164 | 10.21 | 0.29 | 4.6 | 95.4 | 0.0 | -0.08 | 0.59 | 0.84 | 0.88 | 2.90 | 19038 | 2394 | 24 | 0 | 51 | 0 | 0 | logfile |
✔ | 7TVE | 26140 | 2023-02-21 | 2022-02-04 | 3.8 | 4.04 | — | 4.0 | 0.005 | 0.86 | 0.0 | 0.05 | 18.77 | 0.00 | 2.213 | 17.42 | 3.26 | 13.4 | 86.3 | 0.3 | -4.24 | 0.73 | 0.69 | 1.65 | 4.0 | 0.003 | 0.70 | 0.0 | 0.04 | 19.76 | 0.00 | 2.166 | 13.82 | 0.19 | 8.9 | 91.1 | 0.1 | -1.61 | 0.76 | 0.75 | 0.72 | 1.08 | 15456 | 1793 | 8 | 54 | 1 | 0 | 0 | logfile |
✔ | 7DR6 | 30824 | 2023-02-23 | 2020-12-26 | 4.1 | 4.22 | — | 4.2 | 0.002 | 0.55 | 0.0 | 0.04 | 7.81 | 0.00 | 2.196 | 10.04 | 0.12 | 4.9 | 94.9 | 0.1 | -2.74 | 0.68 | 0.63 | — | 4.2 | 0.004 | 0.77 | 0.0 | 0.05 | 13.22 | 0.00 | 2.079 | 15.90 | 0.06 | 3.7 | 96.2 | 0.0 | 0.18 | 2.26 | 0.73 | 0.72 | — | 59957 | 7661 | 35 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LT4 | 0967 | 2023-02-27 | 2020-01-21 | 4.5 | 4.86 | — | 4.8 | 0.006 | 0.92 | 0.0 | 0.05 | 15.21 | 0.00 | 1.863 | 25.41 | 1.54 | 7.7 | 92.3 | 0.0 | -0.98 | 0.75 | 0.70 | — | 4.8 | 0.003 | 0.73 | 0.0 | 0.04 | 14.63 | 0.00 | 1.959 | 15.31 | 0.00 | 5.0 | 95.0 | 0.0 | -0.70 | 1.08 | 0.76 | 0.71 | — | 68432 | 8722 | 28 | 0 | 56 | 0 | 0 | logfile |
✔ | 7M62 | 23687 | 2023-02-16 | 2021-03-25 | 3.9 | 3.91 | — | 4.3 | 0.007 | 1.13 | 0.0 | 0.07 | 14.83 | 0.00 | 2.321 | 32.83 | 0.00 | 23.3 | 76.7 | 0.0 | -4.97 | 0.55 | 0.62 | 2.27 | 4.2 | 0.006 | 1.03 | 0.0 | 0.06 | 15.73 | 0.00 | 2.059 | 31.10 | 2.22 | 26.0 | 74.0 | 0.0 | -4.94 | 2.76 | 0.57 | 0.68 | 2.84 | 2380 | 320 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 7S3i | 24825 | 2023-02-18 | 2021-09-07 | 2.51 | 2.95 | 2.29 | 2.8 | 0.002 | 0.44 | 0.0 | 0.04 | 13.63 | 0.00 | 2.088 | 5.73 | 0.00 | 2.1 | 97.9 | 0.0 | 1.36 | 0.80 | 0.87 | 3.90 | 2.8 | 0.003 | 0.50 | 0.0 | 0.04 | 16.13 | 0.00 | 2.094 | 5.73 | 1.15 | 1.8 | 98.2 | 0.0 | 1.82 | 0.93 | 0.76 | 0.88 | 3.50 | 8094 | 1023 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WUT | 32841 | 2023-02-19 | 2022-02-09 | 3.5 | 4.38 | — | 3.9 | 0.003 | 0.81 | 0.0 | 0.05 | 16.78 | 0.00 | 2.139 | 13.93 | 0.20 | 13.3 | 86.4 | 0.3 | -1.82 | 0.86 | 0.78 | 1.34 | 3.9 | 0.003 | 0.96 | 0.0 | 0.05 | 17.27 | 0.00 | 2.187 | 16.62 | 0.29 | 13.0 | 86.7 | 0.3 | -1.85 | 0.31 | 0.86 | 0.79 | 1.33 | 9732 | 1264 | 4 | 0 | 0 | 0 | 0 | logfile |