Table showing results for April 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7M62	23687	2022-04-04	2021-03-25	3.9	3.91	—	4.3	0.007	1.13	0.0	0.07	14.83	0.00	2.321	32.83	0.00	23.3	76.7	0.0	-4.97	0.55	0.62	2.27	4.3	0.003	0.99	0.0	0.05	15.87	0.00	2.105	21.17	0.00	22.7	77.3	0.0	-4.56	2.11	0.57	0.65	3.17	2380	320	10	0	10	0	0	logfile
✔	7M65	23689	2022-04-04	2021-03-25	4.1	4.11	—	4.3	0.009	1.40	0.0	0.10	12.05	0.00	2.392	33.63	0.00	17.6	82.4	0.0	-6.09	0.52	0.73	—	4.2	0.005	0.96	0.0	0.05	12.00	0.00	2.126	25.73	0.00	17.3	82.7	0.0	-6.33	4.44	0.52	0.73	—	2025	275	10	0	5	0	0	logfile
✔	7M64	23688	2022-04-04	2021-03-25	4.0	4.02	—	4.3	0.008	1.15	0.0	0.07	10.07	0.00	2.451	19.77	0.00	8.7	91.3	0.0	-3.84	0.52	0.75	—	4.3	0.003	0.90	0.0	0.04	11.30	0.00	2.242	6.78	0.00	5.2	94.8	0.0	-4.00	1.14	0.51	0.74	—	1850	250	10	0	10	0	0	logfile
✔	7PEC	13352	2022-04-08	2021-08-09	4.24	4.75	—	4.4	0.002	0.49	0.0	0.04	14.50	0.00	2.238	5.33	4.99	4.6	95.4	0.0	-1.94	0.73	0.78	—	4.4	0.003	0.67	0.0	0.04	13.43	0.00	2.088	13.53	0.00	3.3	96.7	0.1	0.43	0.93	0.74	0.79	—	30911	3822	5	0	57	0	0	logfile
✔	7M61	23686	2022-04-04	2021-03-25	3.8	3.83	—	4.1	0.005	1.01	0.0	0.08	12.79	0.00	2.218	22.02	0.00	14.3	85.7	0.0	-4.63	0.49	0.73	2.45	3.9	0.004	0.78	0.0	0.05	14.97	0.00	2.122	20.78	1.03	14.8	85.2	0.0	-4.62	0.86	0.47	0.75	2.83	1690	230	10	0	10	0	0	logfile
✔	7PEB	13351	2022-04-07	2021-08-09	3.67	4.11	—	3.9	0.002	0.52	0.0	0.04	13.94	0.00	2.245	4.50	2.69	5.1	94.9	0.1	-2.66	0.71	0.73	1.45	3.9	0.003	0.71	0.0	0.04	15.49	0.00	2.078	11.11	0.41	3.6	96.4	0.0	0.89	2.13	0.72	0.75	1.13	29140	3611	5	0	57	0	0	logfile
✔	7RTV	24690	2022-04-04	2021-08-15	3.96	4.06	—	4.1	0.003	0.68	0.0	0.04	16.49	0.00	2.207	14.04	0.32	2.8	97.2	0.0	3.61	0.41	0.63	0.10	4.1	0.004	0.87	0.0	0.05	18.50	0.00	2.197	15.60	0.32	3.0	97.0	0.0	2.57	0.49	0.42	0.64	0.60	2881	366	3	0	6	0	0	logfile
✔	7K0S	22615	2022-04-05	2020-09-05	4.5	4.73	4.68	4.6	0.003	0.64	2.0	0.04	13.93	0.00	2.069	9.66	0.95	7.8	92.0	0.2	-0.08	0.80	0.73	—	4.6	0.043	3.18	233.0	0.13	17.11	0.02	1.373	135.62	0.04	44.5	52.1	3.4	-7.55	2.27	0.84	0.82	—	116057	12911	8	0	3558	0	0	logfile
✔	7V5G	31724	2022-04-09	2021-08-17	4.47	4.49	—	3.6	0.002	0.50	1.0	0.04	7.72	0.00	2.210	9.85	0.08	5.7	94.2	0.1	-2.80	0.86	0.71	—	3.8	0.004	0.73	0.0	0.04	12.29	0.00	2.034	21.47	0.02	4.3	95.7	0.0	-0.67	2.25	0.89	0.79	—	48150	6193	28	0	0	0	0	logfile
✔	7V5M	31727	2022-04-09	2021-08-17	3.88	4.12	—	3.8	0.002	0.61	0.0	0.04	7.67	0.00	2.155	9.48	0.00	3.0	96.9	0.1	-2.87	0.80	0.69	1.03	3.8	0.005	0.84	0.0	0.05	14.29	0.00	2.001	17.49	0.52	3.3	96.7	0.0	-0.10	1.82	0.90	0.85	2.17	45340	6198	28	0	0	0	0	logfile
✔	6YT5	10912	2022-04-09	2020-04-23	3.0	2.67	—	3.3	0.010	0.73	0.0	0.05	15.51	0.00	2.196	13.76	0.15	8.0	92.0	0.0	-4.28	0.85	0.81	2.08	3.3	0.004	0.76	0.0	0.04	17.73	0.01	2.144	11.76	1.90	3.6	96.4	0.0	0.71	0.54	0.83	0.81	1.27	39078	5040	12	0	0	0	0	logfile
✔	7EW7	31349	2022-04-05	2021-05-24	3.27	3.91	—	3.9	0.005	0.58	0.0	0.04	13.57	0.00	2.016	6.68	0.71	3.6	96.4	0.0	-2.17	0.56	0.74	2.49	3.9	0.003	0.59	0.0	0.04	15.69	0.00	2.150	6.73	0.41	4.4	95.6	0.0	-0.44	1.29	0.60	0.78	1.96	9004	1144	6	0	1	0	0	logfile
✔	7EW2	31345	2022-04-04	2021-05-24	3.1	3.30	—	3.4	0.004	0.77	0.0	0.05	14.04	0.00	2.201	10.55	0.61	1.7	98.3	0.0	-0.25	0.60	0.68	1.56	3.4	0.013	1.17	1.0	0.04	15.99	0.01	2.200	10.43	0.00	3.9	96.1	0.0	0.02	0.37	0.61	0.74	1.68	9001	1149	5	0	1	0	0	logfile
✔	7N6Q	24208	2022-04-05	2021-06-08	3.87	3.99	—	4.0	0.014	1.80	0.0	0.08	16.00	0.00	2.223	7.63	1.55	7.5	92.5	0.0	-4.50	0.51	0.68	2.01	4.0	0.003	0.73	0.0	0.05	17.54	0.00	2.201	9.97	0.31	5.5	94.5	0.0	0.01	2.52	0.66	0.81	1.47	12752	1500	8	0	16	0	0	logfile
✔	7M1P	23617	2022-04-05	2021-03-14	3.6	3.93	—	3.8	0.003	0.58	0.0	0.04	13.50	0.00	2.226	8.03	0.00	9.4	90.4	0.2	-0.96	0.68	0.74	1.70	3.9	0.010	1.10	1.0	0.04	15.12	0.01	2.166	9.45	0.27	9.5	90.4	0.1	-1.05	0.30	0.68	0.75	1.22	13511	1938	5	0	13	1	0	logfile
✔	7RLB	24524	2022-04-08	2021-07-23	3.3	3.56	—	3.2	0.004	0.75	0.0	0.04	14.61	0.00	2.259	10.02	0.03	3.8	96.0	0.3	-1.67	0.80	0.68	0.64	3.2	0.006	0.73	0.0	0.05	16.15	0.00	2.083	13.67	0.27	4.8	95.1	0.1	-0.72	1.86	0.89	0.87	1.61	34884	4410	12	0	12	0	0	logfile
✔	7RLF	24528	2022-04-08	2021-07-23	3.1	3.36	—	3.0	0.004	0.58	0.0	0.04	14.61	0.00	2.042	12.47	0.19	3.9	95.9	0.3	0.50	0.85	0.83	2.17	3.0	0.004	0.58	0.0	0.04	15.07	0.00	1.947	9.93	0.13	3.7	96.1	0.2	0.85	0.40	0.89	0.89	2.30	34578	4368	12	0	24	0	0	logfile
✔	7K0T	22616	2022-04-05	2020-09-05	4.3	4.52	4.28	4.2	0.003	0.64	1.0	0.04	13.78	0.00	2.133	7.45	0.59	7.4	92.4	0.2	-0.12	0.84	0.76	—	4.2	0.036	2.69	59.0	0.11	15.82	0.02	1.138	109.75	0.01	43.2	55.3	1.5	-7.43	2.67	0.86	0.83	—	115288	12743	8	0	3608	0	0	logfile
✔	7RL6	24518	2022-04-08	2021-07-23	3.7	4.07	—	3.2	0.003	0.72	0.0	0.04	15.39	0.00	1.941	10.15	0.32	4.9	94.8	0.3	-1.82	0.87	0.77	0.55	3.3	0.003	0.71	0.0	0.04	15.73	0.00	2.166	12.91	0.05	4.1	95.6	0.3	-0.78	1.54	0.88	0.82	0.70	34854	4410	12	0	12	0	0	logfile
✔	7K9i	22749	2022-04-04	2020-09-29	3.3	3.72	3.48	3.6	0.005	0.71	0.0	0.05	12.68	0.00	2.118	12.07	0.00	3.6	96.4	0.0	-0.86	0.55	0.82	3.38	3.6	0.003	0.71	0.0	0.04	14.44	0.00	2.179	13.00	0.28	4.3	95.7	0.0	-0.56	1.62	0.53	0.82	2.68	3295	423	4	0	1	0	0	logfile

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