The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7UZX | 26921 | 2023-07-07 | 2022-05-09 | 3.49 | 4.37 | 3.42 | 3.7 | 0.007 | 0.91 | 0.0 | 0.05 | 13.98 | 0.00 | 1.865 | 11.12 | 0.06 | 7.0 | 93.0 | 0.1 | -0.88 | 0.82 | 0.72 | 1.88 | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 15.84 | 0.00 | 2.051 | 9.68 | 0.06 | 3.7 | 96.3 | 0.0 | 0.55 | 1.83 | 0.88 | 0.83 | 1.60 | 14858 | 1760 | 9 | 36 | 0 | 0 | 0 | logfile |
✔ | 7UKC | 26576 | 2023-07-04 | 2022-04-01 | 3.0 | 3.39 | 2.98 | 3.3 | 0.006 | 0.67 | 0.0 | 0.04 | 12.54 | 0.00 | 2.127 | 8.37 | 0.24 | 3.1 | 96.9 | 0.0 | 0.47 | 0.66 | 0.87 | 3.11 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.43 | 0.00 | 2.216 | 8.80 | 1.54 | 2.7 | 97.3 | 0.0 | 1.94 | 0.38 | 0.66 | 0.86 | 2.76 | 8000 | 1036 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 7SQQ | 25390 | 2023-07-19 | 2021-11-06 | 4.2 | 7.22 | 4.25 | 3.9 | 0.003 | 0.63 | 0.0 | 0.04 | 13.76 | 0.00 | 1.134 | 8.38 | 0.00 | 3.1 | 96.9 | 0.0 | 1.04 | 0.93 | 0.83 | — | 3.9 | 0.003 | 0.64 | 0.0 | 0.04 | 13.65 | 0.00 | 2.215 | 14.03 | 0.00 | 4.6 | 95.4 | 0.0 | 0.59 | 0.88 | 0.92 | 0.87 | — | 103632 | 13296 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VQ8 | 21319 | 2023-07-05 | 2020-02-04 | 3.9 | 4.52 | — | 4.2 | 0.009 | 0.97 | 0.0 | 0.06 | 10.71 | 0.00 | 2.220 | 3.69 | 0.78 | 2.5 | 97.3 | 0.2 | 0.61 | 0.78 | 0.73 | 1.33 | 4.2 | 0.004 | 0.85 | 0.0 | 0.05 | 14.38 | 0.00 | 2.037 | 20.59 | 0.37 | 4.2 | 95.8 | 0.0 | 0.86 | 2.77 | 0.81 | 0.81 | 1.10 | 60714 | 8451 | 35 | 0 | 1 | 0 | 0 | logfile |
✔ | 7NRi | 12546 | 2023-07-11 | 2021-03-03 | 3.03 | 3.49 | 3.11 | 3.3 | 0.007 | 0.63 | 2.0 | 0.05 | 14.47 | 0.00 | 1.984 | 3.89 | 0.32 | 6.2 | 93.7 | 0.1 | -3.46 | 0.78 | 0.84 | 3.97 | 3.3 | 0.003 | 0.51 | 0.0 | 0.04 | 15.42 | 0.00 | 2.020 | 3.76 | 0.00 | 3.1 | 96.9 | 0.0 | -0.28 | 0.68 | 0.75 | 0.87 | 3.84 | 23143 | 1505 | 6 | 0 | 0 | 0 | 11351 | logfile |
✔ | 5oQJ | 3846 | 2023-07-06 | 2017-08-11 | 4.7 | 4.68 | — | 4.2 | 0.007 | 0.54 | 0.0 | 0.04 | 12.44 | 0.00 | 1.336 | 7.82 | 0.30 | 6.5 | 92.3 | 1.2 | -3.41 | 0.70 | 0.58 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.04 | 14.43 | 0.00 | 2.036 | 13.74 | 0.02 | 5.3 | 94.5 | 0.2 | -0.30 | 1.79 | 0.84 | 0.81 | — | 62931 | 7649 | 43 | 148 | 557 | 0 | 0 | logfile |
✔ | 8E5P | 27917 | 2023-07-10 | 2022-08-22 | 4.4 | 9.89 | 6.01 | 8.2 | 0.003 | 0.64 | 0.0 | 0.04 | 11.32 | 0.00 | 1.299 | 26.66 | 1.63 | 1.3 | 98.4 | 0.3 | -0.83 | 0.61 | 0.33 | — | 8.2 | 0.003 | 0.69 | 0.0 | 0.04 | 11.81 | 0.00 | 1.266 | 18.73 | 0.00 | 2.8 | 97.2 | 0.0 | 0.85 | 1.53 | 0.85 | 0.77 | — | 20038 | 2502 | 13 | 8 | 18 | 0 | 0 | logfile |
✔ | 7ZW1 | 14991 | 2023-07-06 | 2022-05-17 | 3.7 | 4.52 | 3.66 | 3.9 | 0.002 | 0.50 | 0.0 | 0.03 | 17.28 | 0.00 | 2.021 | 7.62 | 0.16 | 3.1 | 96.9 | 0.0 | 3.09 | 0.65 | 0.80 | 1.73 | 3.9 | 0.002 | 0.49 | 0.0 | 0.03 | 17.41 | 0.00 | 2.023 | 8.73 | 0.16 | 2.9 | 97.1 | 0.0 | 3.13 | 0.70 | 0.65 | 0.80 | 1.48 | 11807 | 760 | 3 | 0 | 0 | 0 | 5883 | logfile |
✔ | 7A6E | 11671 | 2023-07-06 | 2020-08-25 | 3.6 | 2.83 | — | 3.6 | 0.009 | 0.93 | 0.0 | 0.06 | 13.31 | 0.00 | 1.357 | 23.95 | 1.72 | 5.3 | 94.7 | 0.0 | -2.92 | 0.57 | 0.73 | 1.42 | 3.6 | 0.004 | 0.66 | 0.0 | 0.04 | 15.35 | 0.00 | 2.215 | 10.11 | 0.60 | 3.9 | 96.1 | 0.0 | 0.40 | 1.36 | 0.58 | 0.76 | 1.49 | 12757 | 1596 | 4 | 0 | 13 | 0 | 0 | logfile |
✔ | 7MGL | 23828 | 2023-07-07 | 2021-04-12 | 2.9 | 3.03 | — | 3.0 | 0.013 | 0.84 | 0.0 | 0.04 | 14.84 | 0.00 | 2.177 | 5.52 | 3.10 | 5.1 | 94.9 | 0.0 | -1.33 | 0.64 | 0.84 | 3.67 | 3.0 | 0.003 | 0.66 | 0.0 | 0.04 | 16.04 | 0.00 | 2.224 | 5.39 | 2.14 | 4.3 | 95.7 | 0.0 | 1.56 | 0.84 | 0.63 | 0.86 | 3.34 | 15476 | 1888 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7F66 | 31474 | 2023-07-15 | 2021-06-24 | 2.76 | 3.34 | — | 3.1 | 0.002 | 0.52 | 0.0 | 0.04 | 12.56 | 0.00 | 2.091 | 6.49 | 0.00 | 4.6 | 95.4 | 0.0 | 0.55 | 0.83 | 0.87 | 3.31 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 14.64 | 0.00 | 2.210 | 7.05 | 0.87 | 4.7 | 95.3 | 0.0 | 0.97 | 0.35 | 0.80 | 0.86 | 2.95 | 33739 | 4547 | 15 | 0 | 14 | 0 | 0 | logfile |
✔ | 8ET8 | 28588 | 2023-07-04 | 2022-10-16 | 3.45 | 3.65 | 3.52 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 11.79 | 0.00 | 2.035 | 4.62 | 0.94 | 3.8 | 96.2 | 0.0 | 1.27 | 0.52 | 0.74 | 1.41 | 3.6 | 0.004 | 0.59 | 0.0 | 0.03 | 15.01 | 0.00 | 1.975 | 7.77 | 0.24 | 4.9 | 95.1 | 0.0 | 0.62 | 1.20 | 0.51 | 0.78 | 1.42 | 8125 | 532 | 3 | 0 | 3 | 0 | 4007 | logfile |
✔ | 6VQ6 | 21317 | 2023-07-06 | 2020-02-04 | 3.9 | 4.53 | — | 4.2 | 0.009 | 0.95 | 1.0 | 0.06 | 10.96 | 0.00 | 1.809 | 2.38 | 0.30 | 2.6 | 97.2 | 0.3 | 0.63 | 0.77 | 0.71 | 1.23 | 4.2 | 0.004 | 0.87 | 0.0 | 0.05 | 14.54 | 0.00 | 1.947 | 20.63 | 0.28 | 4.4 | 95.6 | 0.0 | 0.55 | 1.81 | 0.81 | 0.82 | 0.92 | 62385 | 8454 | 35 | 0 | 2 | 0 | 0 | logfile |
✔ | 6KQo | 0754 | 2023-07-06 | 2019-08-18 | 2.52 | 3.75 | — | 3.2 | 0.019 | 1.16 | 0.0 | 0.07 | 14.49 | 0.00 | 1.883 | 10.69 | 0.03 | 9.4 | 90.6 | 0.0 | -5.07 | 0.87 | 0.85 | 3.52 | 3.3 | 0.004 | 0.74 | 1.0 | 0.12 | 15.30 | 0.00 | 1.796 | 8.64 | 0.84 | 3.5 | 96.5 | 0.0 | 0.22 | 1.66 | 0.85 | 0.84 | 3.14 | 63373 | 3936 | 24 | 0 | 48 | 0 | 31225 | logfile |
✔ | 6VQH | 21350 | 2023-07-09 | 2020-02-05 | 4.4 | 4.72 | — | 4.6 | 0.008 | 1.00 | 0.0 | 0.07 | 11.13 | 0.00 | 2.336 | 5.47 | 2.06 | 2.6 | 97.2 | 0.2 | 0.63 | 0.64 | 0.67 | — | 4.6 | 0.004 | 0.83 | 0.0 | 0.05 | 11.90 | 0.00 | 2.130 | 19.29 | 0.00 | 3.1 | 96.9 | 0.0 | 1.38 | 1.04 | 0.68 | 0.73 | — | 19338 | 2813 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZGQ | 14711 | 2023-07-07 | 2022-04-04 | 2.8 | 2.47 | 2.69 | 2.8 | 0.003 | 0.55 | 0.0 | 0.04 | 16.53 | 0.00 | 2.162 | 11.35 | 3.25 | 6.7 | 93.3 | 0.0 | -1.11 | 0.77 | 0.85 | 3.25 | 2.8 | 0.003 | 0.59 | 0.0 | 0.05 | 16.86 | 0.00 | 2.152 | 12.01 | 4.44 | 7.1 | 92.9 | 0.0 | -1.30 | 0.27 | 0.77 | 0.85 | 3.55 | 13704 | 1749 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EBY | 28002 | 2023-07-11 | 2022-08-31 | 3.6 | 2.60 | 3.53 | 2.1 | 0.002 | 0.47 | 0.0 | 0.04 | 11.83 | 0.00 | 2.142 | 8.09 | 2.23 | 4.3 | 95.6 | 0.0 | 0.93 | 0.71 | 0.72 | 1.81 | 2.1 | 0.004 | 0.79 | 0.0 | 0.04 | 16.94 | 0.00 | 2.134 | 15.64 | 0.60 | 5.4 | 94.5 | 0.0 | -0.27 | 1.43 | 0.74 | 0.73 | 1.50 | 23709 | 2834 | 15 | 45 | 7 | 0 | 0 | logfile |
✔ | 8HAi | 34591 | 2023-07-08 | 2022-10-26 | 4.7 | 4.54 | 4.59 | 4.0 | 0.003 | 0.58 | 0.0 | 0.03 | 24.62 | 0.00 | 2.249 | 10.79 | 0.00 | 1.5 | 98.5 | 0.0 | 1.74 | 0.83 | 0.72 | — | 4.0 | 0.003 | 0.60 | 0.0 | 0.03 | 26.25 | 0.00 | 2.109 | 16.54 | 0.00 | 1.6 | 98.4 | 0.0 | 1.91 | 1.65 | 0.86 | 0.79 | — | 16547 | 1310 | 11 | 294 | 0 | 0 | 0 | logfile |
✔ | 6KPi | 0747 | 2023-07-06 | 2019-08-15 | 2.43 | 3.50 | — | 3.0 | 0.008 | 0.67 | 0.0 | 0.06 | 11.99 | 0.00 | 1.974 | 5.19 | 0.00 | 7.1 | 92.9 | 0.0 | -4.39 | 0.85 | 0.88 | 4.58 | 3.0 | 0.005 | 0.78 | 3.0 | 0.13 | 14.43 | 0.00 | 1.988 | 5.83 | 0.62 | 3.5 | 96.5 | 0.0 | 1.23 | 0.72 | 0.85 | 0.89 | 4.30 | 62209 | 3936 | 24 | 0 | 24 | 0 | 31225 | logfile |
✔ | 6KQ8 | 0751 | 2023-07-06 | 2019-08-16 | 3.0 | 4.05 | — | 3.7 | 0.004 | 0.68 | 3.0 | 0.13 | 12.41 | 0.00 | 2.049 | 6.27 | 0.00 | 4.3 | 95.7 | 0.0 | -4.72 | 0.87 | 0.86 | 3.55 | 3.7 | 0.005 | 0.76 | 2.0 | 0.13 | 13.98 | 0.00 | 2.013 | 7.94 | 0.25 | 5.8 | 94.2 | 0.0 | -0.01 | 1.38 | 0.87 | 0.87 | 3.82 | 62197 | 3936 | 24 | 0 | 12 | 0 | 31225 | logfile |