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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7LMA | 23437 | 2023-02-22 | 2021-02-05 | 3.3 | 3.45 | — | 3.4 | 0.004 | 0.56 | 0.0 | 0.04 | 16.77 | 0.00 | 2.202 | 6.67 | 0.91 | 4.3 | 95.7 | 0.0 | -2.64 | 0.73 | 0.82 | 2.57 | 3.4 | 0.002 | 0.55 | 0.0 | 0.04 | 17.83 | 0.00 | 2.068 | 7.82 | 0.24 | 2.7 | 97.3 | 0.0 | 0.22 | 0.56 | 0.76 | 0.84 | 1.91 | 18672 | 1837 | 9 | 170 | 1 | 0 | 0 | logfile |
✔ | 7AJQ | 11806 | 2023-02-19 | 2020-09-29 | 4.0 | 3.67 | 4.30 | 4.2 | 0.002 | 0.55 | 0.0 | 0.03 | 13.10 | 0.00 | 2.208 | 12.84 | 0.00 | 3.5 | 96.5 | 0.0 | -0.98 | 0.76 | 0.76 | — | 4.2 | 0.003 | 0.92 | 0.0 | 0.05 | 15.83 | 0.00 | 2.139 | 20.36 | 0.21 | 3.6 | 96.4 | 0.0 | 0.85 | 0.86 | 0.77 | 0.77 | — | 9210 | 1222 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E3i | 27866 | 2023-02-20 | 2022-08-17 | 2.53 | 2.76 | 2.58 | 2.8 | 0.004 | 0.62 | 0.0 | 0.04 | 13.29 | 0.00 | 2.215 | 8.98 | 0.07 | 5.3 | 94.6 | 0.1 | -0.36 | 0.73 | 0.88 | 4.95 | 2.8 | 0.003 | 0.63 | 0.0 | 0.04 | 15.81 | 0.00 | 2.183 | 8.53 | 0.82 | 5.6 | 94.3 | 0.1 | -0.47 | 1.70 | 0.75 | 0.90 | 4.69 | 13431 | 1671 | 5 | 7 | 3 | 0 | 0 | logfile |
✔ | 7XMS | 33303 | 2023-02-18 | 2022-04-26 | 2.9 | 3.10 | 2.83 | 3.2 | 0.002 | 0.46 | 0.0 | 0.04 | 10.09 | 0.00 | 2.251 | 6.90 | 0.00 | 2.9 | 97.1 | 0.0 | -4.06 | 0.55 | 0.65 | 1.49 | 3.1 | 0.004 | 0.76 | 0.0 | 0.04 | 14.98 | 0.00 | 2.040 | 14.79 | 1.73 | 3.7 | 96.3 | 0.0 | -0.47 | 0.80 | 0.61 | 0.76 | 2.09 | 8370 | 1113 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WX4 | 32876 | 2023-02-16 | 2022-02-14 | 3.4 | 3.64 | 2.77 | 3.7 | 0.006 | 0.59 | 0.0 | 0.04 | 16.46 | 0.00 | 2.219 | 8.20 | 6.39 | 7.2 | 92.8 | 0.0 | -3.40 | 0.43 | 0.82 | 0.72 | 3.7 | 0.003 | 0.57 | 0.0 | 0.04 | 17.71 | 0.00 | 2.120 | 5.71 | 0.00 | 6.0 | 94.0 | 0.0 | -0.14 | 0.45 | 0.43 | 0.82 | 0.59 | 1992 | 260 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WKW | 21811 | 2023-02-19 | 2020-04-17 | 3.6 | 3.75 | — | 3.6 | 0.017 | 1.19 | 0.0 | 0.06 | 14.39 | 0.00 | 2.066 | 12.81 | 0.52 | 12.6 | 87.3 | 0.2 | -5.89 | 0.87 | 0.91 | 3.41 | 3.7 | 0.004 | 0.67 | 0.0 | 0.04 | 15.38 | 0.00 | 2.140 | 9.64 | 0.41 | 7.6 | 92.2 | 0.2 | -2.36 | 0.45 | 0.86 | 0.90 | 2.99 | 10037 | 1319 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7Y85 | 33681 | 2023-02-22 | 2022-06-22 | 2.73 | 3.04 | 2.87 | 3.0 | 0.004 | 0.57 | 0.0 | 0.04 | 18.77 | 0.00 | 1.940 | 15.62 | 3.87 | 2.3 | 97.7 | 0.0 | -0.05 | 0.55 | 0.75 | 2.97 | 3.0 | 0.005 | 0.60 | 0.0 | 0.04 | 19.03 | 0.00 | 1.935 | 16.15 | 4.30 | 2.4 | 97.6 | 0.0 | 0.11 | 0.32 | 0.59 | 0.78 | 2.93 | 16502 | 1884 | 5 | 59 | 5 | 0 | 0 | logfile |
✔ | 7WB0 | 32391 | 2023-02-19 | 2021-12-15 | 3.2 | 3.52 | — | 3.3 | 0.003 | 0.58 | 0.0 | 0.03 | 18.37 | 0.00 | 2.136 | 7.20 | 0.00 | 3.3 | 96.6 | 0.1 | 0.54 | 0.70 | 0.73 | 1.78 | 3.3 | 0.003 | 0.58 | 0.0 | 0.03 | 19.27 | 0.00 | 2.184 | 8.33 | 0.00 | 4.3 | 95.6 | 0.1 | 0.39 | 1.06 | 0.71 | 0.77 | 1.00 | 10096 | 797 | 4 | 175 | 0 | 0 | 0 | logfile |
✔ | 6MHo | 9115 | 2023-02-28 | 2018-09-18 | 3.4 | 3.50 | 3.41 | 3.5 | 0.005 | 0.72 | 0.0 | 0.04 | 7.36 | 0.00 | 2.108 | 2.84 | 0.00 | 2.7 | 97.3 | 0.0 | -2.41 | 0.66 | 0.76 | 3.45 | 3.4 | 0.003 | 0.55 | 0.0 | 0.03 | 12.70 | 0.00 | 2.003 | 6.04 | 0.14 | 4.5 | 95.5 | 0.0 | 0.98 | 2.46 | 0.68 | 0.81 | 3.70 | 32224 | 2404 | 4 | 0 | 0 | 0 | 15184 | logfile |
✔ | 7TJT | 25931 | 2023-02-24 | 2022-01-17 | 3.2 | 3.46 | 3.29 | 3.4 | 0.003 | 0.63 | 0.0 | 0.05 | 12.67 | 0.00 | 1.991 | 3.26 | 0.00 | 1.2 | 98.8 | 0.0 | 0.60 | 0.75 | 0.85 | 3.19 | 3.4 | 0.003 | 0.54 | 0.0 | 0.04 | 14.62 | 0.00 | 2.005 | 6.04 | 0.04 | 1.7 | 98.3 | 0.0 | 1.23 | 2.65 | 0.75 | 0.86 | 2.61 | 23129 | 3099 | 11 | 0 | 7 | 0 | 0 | logfile |
✔ | 7X9C | 33071 | 2023-02-18 | 2022-03-15 | 3.0 | 3.24 | — | 3.2 | 0.002 | 0.52 | 0.0 | 0.04 | 10.16 | 0.00 | 2.208 | 8.62 | 0.00 | 3.2 | 96.8 | 0.0 | -2.49 | 0.58 | 0.71 | 1.58 | 3.2 | 0.004 | 0.72 | 0.0 | 0.04 | 14.54 | 0.00 | 2.141 | 12.69 | 2.39 | 3.1 | 96.9 | 0.0 | -0.27 | 0.64 | 0.60 | 0.78 | 1.79 | 7219 | 945 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Q0X | 20555 | 2023-02-20 | 2019-08-02 | 4.2 | 4.30 | — | 4.2 | 0.007 | 0.88 | 0.0 | 0.05 | 17.07 | 0.00 | 2.139 | 24.04 | 1.21 | 8.1 | 91.9 | 0.0 | -3.83 | 0.68 | 0.72 | — | 4.2 | 0.004 | 0.74 | 0.0 | 0.04 | 15.81 | 0.00 | 2.207 | 18.64 | 0.00 | 6.5 | 93.5 | 0.0 | 0.26 | 1.41 | 0.67 | 0.73 | — | 12468 | 1492 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7o6P | 12739 | 2023-02-18 | 2021-04-12 | 2.04 | 2.55 | — | 2.1 | 0.008 | 0.59 | 0.0 | 0.05 | 11.73 | 0.00 | 2.140 | 6.08 | 0.93 | 1.8 | 98.2 | 0.0 | -0.54 | 0.90 | 0.88 | 5.90 | 2.1 | 0.002 | 0.47 | 0.0 | 0.04 | 13.52 | 0.00 | 2.251 | 5.96 | 0.00 | 2.0 | 98.0 | 0.0 | 2.22 | 0.39 | 0.90 | 0.92 | 5.36 | 8276 | 1022 | 8 | 0 | 0 | 268 | 0 | logfile |
✔ | 7Ji0 | 22341 | 2023-02-17 | 2020-07-21 | 2.95 | 3.30 | 3.08 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 12.97 | 0.00 | 2.233 | 3.94 | 5.91 | 4.5 | 95.5 | 0.0 | -3.04 | 0.73 | 0.84 | 4.32 | 3.2 | 0.002 | 0.47 | 0.0 | 0.04 | 15.32 | 0.00 | 2.210 | 3.66 | 2.96 | 3.8 | 96.2 | 0.0 | 1.47 | 0.45 | 0.70 | 0.83 | 3.46 | 3556 | 432 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VAK | 21141 | 2023-02-24 | 2019-12-17 | 3.48 | 3.85 | — | 3.8 | 0.004 | 0.77 | 0.0 | 0.04 | 14.36 | 0.00 | 2.047 | 7.47 | 2.96 | 8.2 | 91.8 | 0.0 | -2.80 | 0.73 | 0.81 | 3.28 | 3.8 | 0.002 | 0.58 | 0.0 | 0.03 | 16.38 | 0.00 | 2.190 | 5.71 | 0.72 | 5.9 | 94.1 | 0.0 | 2.31 | 0.55 | 0.70 | 0.82 | 2.80 | 22781 | 2992 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XVG | 33486 | 2023-02-17 | 2022-05-23 | 3.6 | 3.89 | — | 3.8 | 0.004 | 0.73 | 0.0 | 0.05 | 14.26 | 0.00 | 2.074 | 12.84 | 0.28 | 5.9 | 94.0 | 0.1 | -0.97 | 0.74 | 0.78 | 1.82 | 3.8 | 0.003 | 0.73 | 0.0 | 0.04 | 16.30 | 0.00 | 2.168 | 11.22 | 1.10 | 6.2 | 93.8 | 0.0 | -0.75 | 0.54 | 0.75 | 0.78 | 1.22 | 6438 | 794 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EZ0 | 28725 | 2023-02-22 | 2022-10-29 | 3.7 | 4.09 | 3.78 | 3.9 | 0.004 | 0.63 | 0.0 | 0.04 | 15.91 | 0.00 | 2.130 | 13.69 | 0.12 | 7.3 | 92.7 | 0.0 | -1.65 | 0.85 | 0.82 | 2.02 | 3.9 | 0.014 | 0.72 | 0.0 | 0.04 | 16.52 | 0.01 | 2.158 | 13.94 | 0.24 | 7.3 | 92.7 | 0.0 | -1.49 | 1.15 | 0.84 | 0.82 | 1.91 | 14640 | 1815 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S9B | 24931 | 2023-02-19 | 2021-09-20 | 4.2 | 4.16 | — | 4.0 | 0.006 | 0.82 | 0.0 | 0.05 | 11.72 | 0.00 | 2.213 | 19.98 | 0.78 | 9.9 | 89.8 | 0.3 | -0.99 | 0.61 | 0.81 | — | 4.0 | 0.003 | 0.67 | 0.0 | 0.04 | 11.95 | 0.00 | 2.218 | 12.11 | 0.00 | 8.0 | 92.0 | 0.0 | 0.41 | 0.42 | 0.60 | 0.80 | — | 10458 | 1356 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7STH | 25428 | 2023-02-22 | 2021-11-13 | 3.5 | 4.00 | — | 3.7 | 0.003 | 0.56 | 0.0 | 0.04 | 13.68 | 0.00 | 2.200 | 9.57 | 0.38 | 7.5 | 92.4 | 0.2 | -1.32 | 0.85 | 0.83 | 2.05 | 3.8 | 0.003 | 0.59 | 0.0 | 0.04 | 15.02 | 0.00 | 2.160 | 11.21 | 0.13 | 6.2 | 93.8 | 0.1 | -1.13 | 0.39 | 0.85 | 0.82 | 2.24 | 14010 | 1736 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PR5 | 20457 | 2023-02-19 | 2019-07-10 | 3.3 | 3.71 | — | 3.6 | 0.008 | 0.78 | 0.0 | 0.05 | 22.82 | 0.00 | 1.963 | 13.80 | 0.71 | 1.4 | 98.3 | 0.3 | -3.27 | 0.76 | 0.82 | 2.68 | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 23.49 | 0.00 | 1.510 | 10.60 | 0.24 | 5.2 | 94.8 | 0.0 | 0.55 | 1.15 | 0.75 | 0.82 | 2.45 | 10194 | 960 | 10 | 124 | 6 | 0 | 0 | logfile |