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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Z4G | 14496 | 2023-04-22 | 2022-03-03 | 3.64 | 4.65 | 3.78 | 3.9 | 0.003 | 0.48 | 0.0 | 0.03 | 13.82 | 0.00 | 2.209 | 12.71 | 1.03 | 1.9 | 98.1 | 0.0 | 1.30 | 0.85 | 0.76 | 0.95 | 3.9 | 0.004 | 0.63 | 0.0 | 0.04 | 16.40 | 0.00 | 2.177 | 20.20 | 0.19 | 3.8 | 96.1 | 0.1 | 0.93 | 2.10 | 0.86 | 0.78 | 0.70 | 12714 | 1188 | 4 | 144 | 0 | 0 | 0 | logfile |
✔ | 8HG1 | 34731 | 2023-04-23 | 2022-11-13 | 2.8 | 2.33 | 2.94 | 2.1 | 0.004 | 0.67 | 0.0 | 0.04 | 15.21 | 0.00 | 2.100 | 5.91 | 0.13 | 5.0 | 94.7 | 0.3 | 0.19 | 0.79 | 0.79 | 3.89 | 2.1 | 0.003 | 0.60 | 0.0 | 0.04 | 17.61 | 0.00 | 2.184 | 7.02 | 1.39 | 4.7 | 95.1 | 0.2 | 0.39 | 0.95 | 0.81 | 0.82 | 3.39 | 14155 | 1642 | 6 | 36 | 2 | 0 | 0 | logfile |
✔ | 7S4V | 24835 | 2023-04-22 | 2021-09-09 | 3.28 | 3.87 | — | 3.7 | 0.003 | 0.54 | 0.0 | 0.04 | 17.44 | 0.00 | 2.202 | 4.81 | 0.00 | 5.0 | 95.0 | 0.0 | -1.46 | 0.80 | 0.80 | 2.24 | 3.7 | 0.004 | 0.57 | 0.0 | 0.04 | 18.53 | 0.00 | 2.217 | 5.54 | 0.00 | 5.0 | 95.0 | 0.0 | -0.71 | 0.56 | 0.85 | 0.87 | 2.01 | 12215 | 1122 | 4 | 145 | 0 | 0 | 0 | logfile |
✔ | 7T94 | 25751 | 2023-04-22 | 2021-12-17 | 3.16 | 2.39 | — | 2.1 | 0.007 | 0.93 | 2.0 | 0.06 | 12.20 | 0.00 | 2.081 | 8.29 | 0.12 | 5.3 | 94.7 | 0.0 | -0.68 | 0.77 | 0.77 | 3.26 | 2.1 | 0.004 | 0.68 | 0.0 | 0.04 | 14.96 | 0.00 | 2.127 | 8.35 | 0.46 | 5.5 | 94.5 | 0.0 | -0.03 | 0.96 | 0.78 | 0.80 | 2.68 | 8388 | 1113 | 6 | 0 | 2 | 1 | 0 | logfile |
✔ | 7LiS | 23384 | 2023-04-27 | 2021-01-27 | 2.96 | 3.25 | — | 3.2 | 0.008 | 0.79 | 0.0 | 0.06 | 14.46 | 0.00 | 2.214 | 2.81 | 3.45 | 3.5 | 96.5 | 0.0 | 0.22 | 0.75 | 0.88 | 4.54 | 3.2 | 0.003 | 0.51 | 0.0 | 0.04 | 16.57 | 0.00 | 2.171 | 3.00 | 1.80 | 3.1 | 96.9 | 0.0 | 0.66 | 0.34 | 0.77 | 0.89 | 3.19 | 128880 | 15660 | 60 | 0 | 60 | 0 | 0 | logfile |
✔ | 7KCL | 22812 | 2023-04-21 | 2020-10-06 | 3.14 | 3.19 | — | 3.2 | 0.004 | 0.62 | 0.0 | 0.04 | 15.74 | 0.00 | 2.009 | 10.47 | 0.00 | 4.7 | 95.3 | 0.0 | -0.08 | 0.76 | 0.84 | 2.81 | 3.2 | 0.003 | 0.56 | 0.0 | 0.04 | 17.15 | 0.00 | 1.946 | 11.61 | 0.27 | 4.7 | 95.3 | 0.0 | -0.07 | 0.88 | 0.76 | 0.87 | 2.71 | 10057 | 1249 | 5 | 0 | 6 | 0 | 0 | logfile |
✔ | 7V7R | 31779 | 2023-04-27 | 2021-08-21 | 2.9 | 3.74 | — | 3.2 | 0.004 | 0.61 | 0.0 | 0.05 | 13.58 | 0.00 | 2.163 | 6.28 | 0.00 | 4.5 | 95.4 | 0.1 | 0.06 | 0.89 | 0.87 | 2.64 | 3.2 | 0.003 | 0.59 | 0.0 | 0.04 | 14.81 | 0.00 | 2.180 | 6.28 | 1.07 | 4.5 | 95.4 | 0.1 | 0.27 | 0.27 | 0.88 | 0.87 | 2.31 | 25362 | 3095 | 42 | 0 | 84 | 0 | 0 | logfile |
✔ | 7Uo9 | 26642 | 2023-04-26 | 2022-04-12 | 3.13 | 3.95 | 3.13 | 3.6 | 0.007 | 0.62 | 0.0 | 0.04 | 11.80 | 0.00 | 1.819 | 5.07 | 0.25 | 5.9 | 94.1 | 0.0 | -0.67 | 0.88 | 0.82 | 3.15 | 3.6 | 0.003 | 0.49 | 0.0 | 0.04 | 12.82 | 0.00 | 1.831 | 6.64 | 0.08 | 3.8 | 96.2 | 0.0 | 0.60 | 1.60 | 0.87 | 0.80 | 2.94 | 23863 | 1375 | 12 | 67 | 4 | 245 | 11305 | logfile |
✔ | 7TW1 | 26147 | 2023-04-26 | 2022-02-06 | 4.6 | 3.99 | — | 3.8 | 0.003 | 0.74 | 0.0 | 0.05 | 13.82 | 0.00 | 2.117 | 7.55 | 0.08 | 2.5 | 97.5 | 0.0 | -0.20 | 0.75 | 0.78 | — | 3.7 | 0.003 | 0.64 | 0.0 | 0.04 | 13.96 | 0.00 | 2.179 | 12.52 | 0.04 | 4.1 | 95.9 | 0.0 | -0.25 | 1.17 | 0.75 | 0.79 | — | 23625 | 2993 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Z4i | 14498 | 2023-04-23 | 2022-03-03 | 3.12 | 3.94 | 3.16 | 3.5 | 0.003 | 0.46 | 0.0 | 0.04 | 15.03 | 0.00 | 2.236 | 7.91 | 0.58 | 1.5 | 98.5 | 0.0 | 0.81 | 0.86 | 0.82 | 2.56 | 3.5 | 0.004 | 0.51 | 0.0 | 0.04 | 16.22 | 0.00 | 2.153 | 9.27 | 0.17 | 2.2 | 97.8 | 0.0 | 1.51 | 2.26 | 0.87 | 0.84 | 2.63 | 13820 | 1338 | 5 | 137 | 2 | 0 | 0 | logfile |
✔ | 7B1D | 11984 | 2023-04-21 | 2020-11-24 | 3.41 | 4.29 | 3.57 | 3.6 | 0.004 | 0.71 | 0.0 | 0.05 | 12.49 | 0.00 | 2.197 | 6.80 | 0.29 | 6.2 | 93.8 | 0.0 | -1.47 | 0.88 | 0.82 | 4.03 | 3.6 | 0.005 | 0.69 | 0.0 | 0.04 | 13.58 | 0.00 | 2.160 | 10.73 | 0.29 | 9.5 | 90.5 | 0.0 | -1.30 | 0.37 | 0.89 | 0.86 | 3.57 | 10967 | 1505 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 7V7Q | 31778 | 2023-04-27 | 2021-08-21 | 2.8 | 3.73 | — | 3.2 | 0.004 | 0.58 | 0.0 | 0.05 | 13.81 | 0.00 | 2.148 | 6.16 | 0.00 | 3.9 | 96.0 | 0.1 | 0.05 | 0.89 | 0.87 | 2.71 | 3.2 | 0.003 | 0.57 | 0.0 | 0.04 | 15.18 | 0.00 | 2.185 | 6.14 | 1.22 | 4.5 | 95.4 | 0.1 | 0.32 | 1.13 | 0.88 | 0.87 | 2.26 | 25371 | 3096 | 42 | 0 | 84 | 0 | 0 | logfile |
✔ | 7W0M | 32244 | 2023-04-22 | 2021-11-18 | 3.71 | 2.51 | 3.74 | 2.2 | 0.005 | 0.81 | 0.0 | 0.05 | 13.41 | 0.00 | 2.230 | 11.46 | 0.00 | 5.6 | 94.4 | 0.0 | -1.90 | 0.73 | 0.74 | 2.42 | 2.2 | 0.004 | 0.73 | 0.0 | 0.04 | 16.46 | 0.00 | 2.111 | 11.18 | 0.82 | 6.9 | 93.1 | 0.0 | -1.43 | 0.44 | 0.74 | 0.75 | 2.07 | 8929 | 1134 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8DTi | 27699 | 2023-04-21 | 2022-07-25 | 3.8 | 3.87 | — | 3.8 | 0.006 | 0.66 | 0.0 | 0.04 | 13.31 | 0.00 | 2.196 | 4.70 | 0.00 | 2.9 | 97.1 | 0.0 | 1.82 | 0.81 | 0.76 | 2.21 | 3.8 | 0.002 | 0.55 | 0.0 | 0.04 | 15.22 | 0.00 | 2.204 | 8.20 | 0.43 | 2.3 | 97.7 | 0.0 | 1.89 | 0.40 | 0.82 | 0.79 | 2.07 | 9455 | 1258 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7V0M | 26944 | 2023-04-20 | 2022-05-10 | 2.7 | 2.46 | 2.64 | 2.5 | 0.003 | 0.56 | 0.0 | 0.04 | 18.10 | 0.00 | 2.240 | 3.55 | 1.29 | 3.3 | 96.7 | 0.0 | 0.52 | 0.56 | 0.89 | 4.90 | 2.5 | 0.003 | 0.49 | 0.0 | 0.04 | 18.18 | 0.00 | 2.176 | 4.37 | 2.33 | 3.3 | 96.7 | 0.0 | 1.83 | 0.25 | 0.55 | 0.88 | 4.09 | 3724 | 483 | 4 | 0 | 0 | 60 | 0 | logfile |
✔ | 6YUZ | 10936 | 2023-04-21 | 2020-04-27 | 2.8 | 2.85 | 2.72 | 2.9 | 0.006 | 0.58 | 1.0 | 0.05 | 13.44 | 0.00 | 2.235 | 6.04 | 2.33 | 3.8 | 95.9 | 0.3 | -3.67 | 0.66 | 0.85 | 3.38 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 15.01 | 0.00 | 2.220 | 7.40 | 2.33 | 5.3 | 94.5 | 0.2 | -0.73 | 1.83 | 0.67 | 0.91 | 3.87 | 9782 | 1188 | 4 | 0 | 10 | 0 | 0 | logfile |
✔ | 7V7S | 31780 | 2023-04-27 | 2021-08-21 | 3.0 | 3.84 | — | 3.3 | 0.004 | 0.59 | 0.0 | 0.05 | 13.81 | 0.00 | 2.197 | 7.39 | 0.00 | 3.9 | 96.0 | 0.0 | 0.13 | 0.88 | 0.86 | 1.94 | 3.3 | 0.007 | 0.66 | 0.0 | 0.05 | 15.26 | 0.00 | 2.137 | 8.91 | 1.11 | 5.4 | 94.6 | 0.0 | 0.01 | 0.30 | 0.87 | 0.86 | 1.96 | 25255 | 3088 | 39 | 0 | 81 | 0 | 0 | logfile |
✔ | 8HDo | 34676 | 2023-04-20 | 2022-11-05 | 2.87 | 2.99 | 2.95 | 3.2 | 0.004 | 0.61 | 0.0 | 0.04 | 14.07 | 0.00 | 2.069 | 9.59 | 0.12 | 1.5 | 98.5 | 0.0 | -1.31 | 0.63 | 0.77 | 1.80 | 3.2 | 0.003 | 0.57 | 0.0 | 0.04 | 15.87 | 0.00 | 2.140 | 10.02 | 3.11 | 2.5 | 97.5 | 0.0 | 0.97 | 1.03 | 0.65 | 0.85 | 2.74 | 8277 | 1028 | 5 | 0 | 8 | 0 | 0 | logfile |
✔ | 7URF | 26711 | 2023-04-20 | 2022-04-21 | 2.8 | 2.78 | 2.80 | 2.9 | 0.009 | 0.78 | 0.0 | 1.24 | 17.48 | 0.00 | 2.148 | 5.35 | 0.00 | 3.1 | 96.9 | 0.0 | -0.96 | 0.62 | 0.88 | 3.48 | 2.9 | 0.003 | 1.86 | 0.0 | 0.20 | 17.84 | 0.00 | 2.159 | 5.35 | 1.93 | 3.9 | 96.1 | 0.0 | 1.85 | 2.43 | 0.63 | 0.89 | 2.92 | 6133 | 722 | 5 | 0 | 8 | 0 | 0 | logfile |
✔ | 7V2o | 31658 | 2023-04-19 | 2021-08-09 | 3.5 | 3.22 | 3.31 | 3.0 | 0.008 | 1.12 | 2.0 | 0.10 | 16.74 | 0.00 | 2.203 | 6.79 | 0.18 | 5.3 | 94.5 | 0.2 | -0.53 | 0.81 | 0.84 | 2.00 | 3.0 | 0.006 | 0.68 | 0.0 | 0.04 | 17.20 | 0.01 | 2.071 | 11.50 | 0.41 | 6.4 | 93.5 | 0.1 | -0.38 | 0.37 | 0.80 | 0.83 | 1.99 | 53005 | 2624 | 24 | 1487 | 2 | 0 | 0 | logfile |