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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7oZV | 13138 | 2023-02-18 | 2021-06-28 | 3.2 | 3.08 | 3.16 | 3.3 | 0.007 | 0.58 | 0.0 | 0.04 | 13.23 | 0.01 | 2.202 | 8.41 | 0.00 | 2.6 | 97.4 | 0.0 | -0.22 | 0.64 | 0.79 | 3.09 | 3.3 | 0.002 | 0.47 | 0.0 | 0.04 | 15.35 | 0.00 | 2.152 | 7.74 | 0.34 | 2.3 | 97.7 | 0.0 | 0.17 | 1.89 | 0.72 | 0.83 | 2.83 | 8409 | 991 | 6 | 22 | 2 | 0 | 0 | logfile |
✔ | 7PDS | 13342 | 2023-02-24 | 2021-08-06 | 3.14 | 2.94 | 3.06 | 3.1 | 0.005 | 0.68 | 0.0 | 0.05 | 14.79 | 0.00 | 1.818 | 8.20 | 0.25 | 4.3 | 95.7 | 0.0 | -0.79 | 0.73 | 0.86 | 3.97 | 3.0 | 0.003 | 0.47 | 0.0 | 0.04 | 16.21 | 0.00 | 1.907 | 8.80 | 0.25 | 3.5 | 96.5 | 0.0 | -0.41 | 0.91 | 0.75 | 0.88 | 3.75 | 22549 | 2714 | 13 | 5 | 10 | 0 | 0 | logfile |
✔ | 6U6i | 20666 | 2023-02-28 | 2019-08-29 | 3.12 | 3.43 | — | 3.4 | 0.006 | 0.45 | 0.0 | 0.07 | 11.24 | 0.00 | 2.029 | 6.12 | 0.00 | 7.6 | 92.4 | 0.0 | -3.59 | 0.80 | 0.80 | 4.39 | 3.3 | 0.003 | 0.47 | 0.0 | 0.04 | 13.04 | 0.00 | 2.092 | 5.94 | 0.09 | 5.0 | 95.0 | 0.0 | -0.18 | 0.51 | 0.81 | 0.83 | 4.16 | 21701 | 1496 | 9 | 0 | 11 | 0 | 10337 | logfile |
✔ | 8AP9 | 15562 | 2023-02-23 | 2022-08-09 | 3.7 | 3.41 | 3.21 | 3.4 | 0.006 | 0.48 | 0.0 | 0.04 | 9.61 | 0.00 | 2.191 | 2.85 | 0.40 | 1.9 | 98.1 | 0.0 | -0.08 | 0.57 | 0.83 | 3.96 | 3.4 | 0.003 | 0.47 | 0.0 | 0.04 | 13.17 | 0.00 | 2.147 | 3.87 | 0.00 | 3.2 | 96.8 | 0.0 | -1.39 | 1.39 | 0.63 | 0.86 | 3.40 | 19658 | 1285 | 14 | 0 | 1 | 0 | 9972 | logfile |
✔ | 7o6Q | 12740 | 2023-02-18 | 2021-04-12 | 1.88 | 2.21 | — | 1.9 | 0.010 | 0.71 | 0.0 | 0.05 | 12.80 | 0.01 | 2.115 | 4.83 | 1.25 | 3.2 | 96.8 | 0.0 | -1.61 | 0.88 | 0.85 | 7.59 | 1.9 | 0.002 | 0.47 | 0.0 | 0.04 | 14.51 | 0.00 | 2.189 | 4.72 | 1.63 | 0.8 | 99.2 | 0.0 | 3.42 | 0.36 | 0.90 | 0.90 | 6.06 | 7999 | 997 | 8 | 0 | 0 | 399 | 0 | logfile |
✔ | 7K0M | 22602 | 2023-02-22 | 2020-09-04 | 2.9 | 3.38 | — | 3.3 | 0.005 | 0.69 | 0.0 | 0.04 | 12.85 | 0.00 | 2.218 | 4.70 | 0.00 | 2.3 | 97.7 | 0.0 | 1.05 | 0.62 | 0.79 | 3.49 | 3.3 | 0.002 | 0.47 | 0.0 | 0.04 | 15.02 | 0.00 | 2.174 | 5.05 | 1.14 | 2.0 | 98.0 | 0.0 | 1.40 | 0.38 | 0.63 | 0.80 | 3.01 | 18578 | 2342 | 14 | 0 | 16 | 0 | 0 | logfile |
✔ | 7MQi | 23948 | 2023-02-24 | 2021-05-05 | 3.21 | 3.01 | 3.19 | 3.2 | 0.006 | 0.79 | 0.0 | 0.05 | 12.23 | 0.00 | 2.202 | 2.71 | 0.59 | 1.4 | 98.6 | 0.0 | 0.80 | 0.67 | 0.81 | 4.51 | 3.1 | 0.002 | 0.47 | 0.0 | 0.04 | 14.20 | 0.00 | 2.125 | 3.56 | 0.17 | 2.3 | 97.7 | 0.0 | 1.41 | 1.80 | 0.74 | 0.86 | 4.11 | 12696 | 1640 | 16 | 16 | 0 | 0 | 0 | logfile |
✔ | 7Ji0 | 22341 | 2023-02-17 | 2020-07-21 | 2.95 | 3.30 | 3.08 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 12.97 | 0.00 | 2.233 | 3.94 | 5.91 | 4.5 | 95.5 | 0.0 | -3.04 | 0.73 | 0.84 | 4.32 | 3.2 | 0.002 | 0.47 | 0.0 | 0.04 | 15.32 | 0.00 | 2.210 | 3.66 | 2.96 | 3.8 | 96.2 | 0.0 | 1.47 | 0.45 | 0.70 | 0.83 | 3.46 | 3556 | 432 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TC8 | 25805 | 2023-02-23 | 2021-12-23 | 2.4 | 2.46 | — | 2.5 | 0.008 | 0.68 | 0.0 | 0.05 | 17.52 | 0.00 | 1.659 | 12.47 | 3.31 | 2.3 | 97.7 | 0.0 | 0.38 | 0.74 | 0.86 | 5.19 | 2.5 | 0.003 | 0.47 | 0.0 | 0.04 | 17.56 | 0.00 | 1.800 | 15.85 | 2.86 | 2.2 | 97.8 | 0.0 | 1.50 | 0.26 | 0.74 | 0.87 | 5.15 | 20567 | 2113 | 8 | 0 | 4 | 0 | 3200 | logfile |
✔ | 7SQV | 25396 | 2023-02-17 | 2021-11-06 | 2.3 | 2.95 | 2.29 | 2.8 | 0.001 | 0.38 | 0.0 | 0.04 | 16.08 | 0.00 | 2.314 | 1.47 | 0.63 | 0.7 | 99.3 | 0.0 | 1.86 | 0.76 | 0.88 | 3.59 | 2.8 | 0.003 | 0.47 | 0.0 | 0.04 | 16.30 | 0.00 | 2.295 | 1.36 | 1.67 | 1.1 | 98.9 | 0.0 | 1.71 | 1.99 | 0.77 | 0.90 | 3.84 | 4471 | 573 | 5 | 0 | 0 | 7 | 0 | logfile |
✔ | 7RH9 | 24458 | 2023-02-21 | 2021-07-16 | 2.61 | 2.09 | — | 2.5 | 0.003 | 0.57 | 0.0 | 0.04 | 13.27 | 0.01 | 2.214 | 5.79 | 0.00 | 1.3 | 98.7 | 0.0 | 1.30 | 0.64 | 0.84 | 4.07 | 2.5 | 0.002 | 0.48 | 0.0 | 0.04 | 15.63 | 0.00 | 2.149 | 8.70 | 0.81 | 1.2 | 98.8 | 0.0 | 2.64 | 0.90 | 0.63 | 0.86 | 4.00 | 14680 | 1792 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LFX | 23308 | 2023-02-21 | 2021-01-19 | 3.1 | 2.80 | — | 3.0 | 0.012 | 0.64 | 0.0 | 0.05 | 13.11 | 0.00 | 2.226 | 9.82 | 0.25 | 2.3 | 97.7 | 0.0 | -1.18 | 0.64 | 0.81 | 2.40 | 3.0 | 0.002 | 0.48 | 0.0 | 0.04 | 15.75 | 0.00 | 2.269 | 13.28 | 0.31 | 3.3 | 96.7 | 0.0 | 1.06 | 0.81 | 0.65 | 0.85 | 2.46 | 14846 | 1800 | 8 | 0 | 6 | 0 | 0 | logfile |
✔ | 7STL | 25432 | 2023-02-25 | 2021-11-14 | 2.95 | 3.30 | — | 3.2 | 0.004 | 0.75 | 0.0 | 0.04 | 10.31 | 0.00 | 2.190 | 0.38 | 0.15 | 2.3 | 97.7 | 0.0 | 1.82 | 0.67 | 0.82 | 3.24 | 3.2 | 0.004 | 0.48 | 0.0 | 0.04 | 13.91 | 0.00 | 2.104 | 2.76 | 0.59 | 3.5 | 96.3 | 0.1 | 1.65 | 0.57 | 0.66 | 0.84 | 3.21 | 25668 | 1600 | 4 | 0 | 8 | 0 | 12568 | logfile |
✔ | 7LFT | 23306 | 2023-02-22 | 2021-01-18 | 2.6 | 2.42 | — | 2.6 | 0.009 | 1.10 | 0.0 | 0.06 | 14.80 | 0.00 | 1.832 | 8.78 | 0.25 | 2.5 | 97.5 | 0.0 | -0.82 | 0.69 | 0.87 | 4.43 | 2.5 | 0.002 | 0.48 | 0.0 | 0.04 | 16.03 | 0.00 | 2.231 | 8.37 | 1.60 | 2.0 | 98.0 | 0.0 | 1.69 | 0.56 | 0.71 | 0.88 | 4.26 | 15479 | 1800 | 12 | 0 | 35 | 4 | 0 | logfile |
✔ | 7NKQ | 12446 | 2023-02-19 | 2021-02-18 | 2.98 | 3.25 | — | 3.1 | 0.004 | 0.49 | 0.0 | 0.04 | 13.52 | 0.00 | 2.018 | 7.16 | 0.00 | 2.7 | 97.3 | 0.0 | 1.39 | 0.81 | 0.81 | 2.98 | 3.1 | 0.003 | 0.48 | 0.0 | 0.04 | 15.71 | 0.00 | 2.008 | 6.87 | 1.05 | 2.3 | 97.7 | 0.0 | 2.27 | 0.33 | 0.82 | 0.84 | 2.51 | 10621 | 714 | 8 | 0 | 0 | 0 | 5312 | logfile |
✔ | 7RHi | 24462 | 2023-02-21 | 2021-07-17 | 3.31 | 3.09 | — | 3.2 | 0.012 | 0.71 | 0.0 | 0.05 | 13.67 | 0.00 | 2.230 | 6.80 | 0.00 | 3.1 | 96.9 | 0.0 | -0.39 | 0.68 | 0.83 | 1.85 | 3.2 | 0.002 | 0.48 | 0.0 | 0.04 | 14.97 | 0.00 | 2.238 | 11.27 | 0.25 | 2.9 | 97.1 | 0.0 | 1.39 | 0.89 | 0.70 | 0.87 | 1.92 | 14717 | 1784 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 6MRW | 9214 | 2023-02-23 | 2018-10-15 | 4.3 | 4.76 | — | 4.3 | 0.006 | 0.98 | 0.0 | 0.04 | 10.35 | 0.01 | 2.080 | 4.61 | 0.41 | 2.1 | 97.9 | 0.0 | -0.19 | 0.82 | 0.84 | — | 4.3 | 0.002 | 0.48 | 0.0 | 0.03 | 11.78 | 0.00 | 2.084 | 7.07 | 0.00 | 1.9 | 98.1 | 0.0 | 6.00 | 1.27 | 0.83 | 0.86 | — | 31346 | 3990 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Z0Z | 14435 | 2023-02-22 | 2022-02-24 | 2.68 | 2.92 | 2.79 | 2.8 | 0.006 | 0.72 | 6.0 | 0.05 | 14.67 | 0.00 | 2.092 | 7.37 | 0.54 | 1.9 | 98.0 | 0.2 | 0.45 | 0.74 | 0.86 | 4.83 | 2.8 | 0.003 | 0.48 | 0.0 | 0.04 | 16.57 | 0.00 | 2.174 | 5.16 | 1.06 | 2.0 | 97.8 | 0.2 | 1.32 | 0.44 | 0.78 | 0.90 | 4.34 | 29466 | 3510 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RHH | 24461 | 2023-02-21 | 2021-07-17 | 3.31 | 3.03 | — | 3.0 | 0.012 | 0.65 | 0.0 | 0.05 | 13.02 | 0.00 | 2.231 | 5.58 | 0.06 | 2.2 | 97.8 | 0.0 | 0.69 | 0.68 | 0.84 | 2.48 | 3.0 | 0.002 | 0.48 | 0.0 | 0.04 | 14.33 | 0.00 | 2.191 | 9.27 | 0.06 | 2.1 | 97.9 | 0.0 | 1.55 | 0.38 | 0.69 | 0.87 | 2.40 | 14717 | 1784 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7MQF | 23945 | 2023-02-24 | 2021-05-05 | 2.88 | 2.74 | 2.86 | 2.8 | 0.006 | 0.72 | 0.0 | 0.06 | 11.73 | 0.00 | 2.175 | 1.01 | 0.00 | 0.5 | 99.5 | 0.0 | 1.24 | 0.72 | 0.87 | 6.16 | 2.7 | 0.003 | 0.48 | 0.0 | 0.04 | 13.43 | 0.00 | 2.255 | 2.60 | 0.00 | 1.0 | 99.0 | 0.0 | 1.00 | 0.44 | 0.78 | 0.91 | 5.71 | 12288 | 1608 | 16 | 16 | 0 | 0 | 0 | logfile |