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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7RPH | 24614 | 2023-07-04 | 2021-08-03 | 2.5 | 2.68 | 2.59 | 2.7 | 0.017 | 1.89 | 4.0 | 0.12 | 14.72 | 0.01 | 1.952 | 2.03 | 0.61 | 2.1 | 97.9 | 0.0 | -0.70 | 0.53 | 0.76 | 4.93 | 2.7 | 0.002 | 0.63 | 0.0 | 0.04 | 16.11 | 0.00 | 2.195 | 6.19 | 2.21 | 1.6 | 98.4 | 0.0 | 2.13 | 1.30 | 0.66 | 0.85 | 3.03 | 8573 | 926 | 1 | 0 | 36 | 86 | 0 | logfile |
✔ | 6TAY | 10430 | 2023-07-16 | 2019-10-31 | 3.2 | 2.55 | — | 2.9 | 0.011 | 1.15 | 0.0 | 0.06 | 11.27 | 0.01 | 2.066 | 4.61 | 0.28 | 8.9 | 91.0 | 0.1 | -3.72 | 0.86 | 0.82 | 3.85 | 2.9 | 0.002 | 0.61 | 0.0 | 0.04 | 13.97 | 0.00 | 2.036 | 8.69 | 0.18 | 7.2 | 92.8 | 0.0 | 0.47 | 1.18 | 0.87 | 0.84 | 2.41 | 35241 | 4350 | 1 | 0 | 71 | 0 | 0 | logfile |
✔ | 7CN1 | 30413 | 2023-07-04 | 2020-07-29 | 3.7 | 3.74 | — | 3.7 | 0.008 | 0.78 | 0.0 | 0.05 | 13.72 | 0.00 | 2.147 | 16.07 | 0.32 | 10.2 | 89.8 | 0.0 | -3.65 | 0.47 | 0.79 | 1.71 | 3.7 | 0.002 | 0.60 | 0.0 | 0.04 | 15.22 | 0.00 | 2.206 | 8.47 | 0.32 | 5.1 | 94.9 | 0.0 | 0.32 | 0.61 | 0.48 | 0.75 | 1.56 | 6290 | 822 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 6XiW | 22203 | 2023-07-06 | 2020-06-22 | 2.8 | 3.04 | — | 3.0 | 0.005 | 0.86 | 0.0 | 0.04 | 15.93 | 0.00 | 2.257 | 2.98 | 0.79 | 3.8 | 96.2 | 0.0 | -1.79 | 0.55 | 0.85 | 3.36 | 3.0 | 0.002 | 0.54 | 0.0 | 0.04 | 17.30 | 0.00 | 2.240 | 5.88 | 1.82 | 2.2 | 97.8 | 0.0 | 2.00 | 2.52 | 0.53 | 0.87 | 2.47 | 11819 | 1400 | 4 | 0 | 12 | 5 | 0 | logfile |
✔ | 8i1T | 35121 | 2023-07-11 | 2023-01-13 | 2.8 | 2.69 | 2.76 | 2.7 | 0.007 | 0.70 | 0.0 | 0.05 | 14.07 | 0.00 | 2.196 | 7.64 | 0.08 | 3.2 | 96.6 | 0.2 | -1.01 | 0.58 | 0.87 | 4.08 | 2.7 | 0.002 | 0.55 | 0.0 | 0.04 | 15.55 | 0.00 | 2.181 | 7.49 | 1.30 | 2.5 | 97.3 | 0.2 | -0.65 | 0.28 | 0.58 | 0.88 | 3.21 | 22939 | 3003 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QTL | 14144 | 2023-07-09 | 2022-01-14 | 2.48 | 2.85 | 2.48 | 2.5 | 0.007 | 0.66 | 0.0 | 0.04 | 17.25 | 0.01 | 1.988 | 8.61 | 3.98 | 2.4 | 97.6 | 0.0 | -1.53 | 0.89 | 0.86 | 4.27 | 2.5 | 0.002 | 0.55 | 0.0 | 0.04 | 17.21 | 0.00 | 1.460 | 7.67 | 2.04 | 1.9 | 98.1 | 0.0 | 0.95 | 4.18 | 0.91 | 0.90 | 3.84 | 18397 | 2152 | 14 | 44 | 4 | 120 | 0 | logfile |
✔ | 7RR7 | 24654 | 2023-07-11 | 2021-08-09 | 3.05 | 3.60 | 3.05 | 3.5 | 0.005 | 0.77 | 2.0 | 0.05 | 14.15 | 0.00 | 2.201 | 8.22 | 0.28 | 3.1 | 96.9 | 0.0 | 0.40 | 0.76 | 0.85 | 2.89 | 3.5 | 0.002 | 0.53 | 0.0 | 0.04 | 14.05 | 0.00 | 2.122 | 8.20 | 0.28 | 2.3 | 97.7 | 0.0 | 0.93 | 0.33 | 0.77 | 0.88 | 2.40 | 23734 | 3061 | 6 | 0 | 27 | 0 | 0 | logfile |
✔ | 7SCA | 25031 | 2023-07-04 | 2021-09-27 | 2.1 | 2.23 | 2.15 | 2.2 | 0.011 | 1.14 | 7.0 | 0.07 | 15.33 | 0.01 | 2.057 | 5.44 | 0.78 | 1.0 | 99.0 | 0.0 | 2.17 | 0.79 | 0.85 | 5.74 | 2.2 | 0.002 | 0.55 | 0.0 | 0.04 | 16.60 | 0.00 | 2.121 | 8.28 | 0.87 | 0.9 | 99.1 | 0.0 | 2.87 | 1.09 | 0.79 | 0.85 | 5.28 | 55437 | 6836 | 116 | 0 | 54 | 1325 | 0 | logfile |
✔ | 7WGC | 32483 | 2023-07-04 | 2021-12-28 | 3.6 | 3.85 | — | 3.8 | 0.003 | 0.63 | 0.0 | 0.04 | 14.80 | 0.00 | 2.191 | 10.26 | 0.00 | 3.8 | 96.2 | 0.0 | -0.11 | 0.56 | 0.55 | 1.21 | 3.8 | 0.002 | 0.61 | 0.0 | 0.04 | 16.25 | 0.00 | 2.170 | 10.73 | 0.43 | 4.2 | 95.8 | 0.0 | 0.33 | 0.37 | 0.56 | 0.54 | 0.98 | 6527 | 795 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 7X6A | 33019 | 2023-07-14 | 2022-03-07 | 3.5 | 3.86 | — | 3.8 | 0.002 | 0.52 | 0.0 | 0.04 | 14.04 | 0.00 | 1.981 | 7.25 | 0.06 | 6.2 | 93.5 | 0.4 | -1.29 | 0.76 | 0.78 | 1.61 | 3.8 | 0.002 | 0.59 | 0.0 | 0.04 | 15.95 | 0.00 | 2.124 | 6.71 | 0.21 | 6.0 | 93.6 | 0.4 | -0.96 | 1.67 | 0.76 | 0.80 | 1.92 | 30879 | 3969 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 6T0S | 10358 | 2023-07-07 | 2019-10-03 | 3.04 | 3.11 | 3.10 | 3.1 | 0.003 | 0.60 | 0.0 | 0.04 | 13.17 | 0.01 | 2.109 | 4.37 | 4.69 | 2.8 | 97.2 | 0.0 | -3.21 | 0.68 | 0.86 | 3.59 | 3.1 | 0.002 | 0.52 | 0.0 | 0.04 | 15.00 | 0.00 | 1.972 | 9.02 | 0.20 | 1.9 | 98.1 | 0.0 | 0.58 | 0.54 | 0.69 | 0.88 | 3.15 | 14651 | 1700 | 6 | 43 | 2 | 0 | 0 | logfile |
✔ | 8DTi | 27699 | 2023-07-05 | 2022-07-25 | 3.8 | 3.87 | — | 3.8 | 0.006 | 0.66 | 0.0 | 0.04 | 13.31 | 0.00 | 2.196 | 4.70 | 0.00 | 2.9 | 97.1 | 0.0 | 1.82 | 0.81 | 0.76 | 2.21 | 3.8 | 0.002 | 0.55 | 0.0 | 0.04 | 15.22 | 0.00 | 2.204 | 8.20 | 0.43 | 2.3 | 97.7 | 0.0 | 1.89 | 0.40 | 0.82 | 0.79 | 2.07 | 9455 | 1258 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7RDY | 24427 | 2023-07-10 | 2021-07-12 | 3.1 | 3.78 | — | 3.6 | 0.015 | 1.04 | 0.0 | 0.14 | 16.08 | 0.01 | 1.894 | 8.06 | 10.18 | 7.6 | 92.4 | 0.0 | -2.87 | 0.81 | 0.82 | 3.04 | 3.6 | 0.002 | 0.58 | 0.0 | 0.04 | 14.97 | 0.00 | 1.967 | 9.29 | 0.14 | 4.7 | 95.3 | 0.0 | -0.34 | 1.18 | 0.77 | 0.79 | 2.63 | 21846 | 2553 | 11 | 78 | 19 | 0 | 0 | logfile |
✔ | 7TYV | 26195 | 2023-07-08 | 2022-02-14 | 2.8 | 2.28 | 2.98 | 2.1 | 0.005 | 0.71 | 0.0 | 0.05 | 13.45 | 0.00 | 2.081 | 7.27 | 0.00 | 5.0 | 95.0 | 0.0 | -0.19 | 0.75 | 0.72 | 2.31 | 2.0 | 0.002 | 0.61 | 0.0 | 0.04 | 16.09 | 0.00 | 2.103 | 6.71 | 2.29 | 4.1 | 95.9 | 0.0 | -0.13 | 0.33 | 0.77 | 0.76 | 2.18 | 17306 | 2114 | 30 | 0 | 58 | 0 | 0 | logfile |
✔ | 7NTC | 12587 | 2023-07-14 | 2021-03-09 | 3.6 | 4.35 | 3.76 | 4.1 | 0.005 | 0.65 | 0.0 | 0.05 | 14.27 | 0.00 | 2.165 | 7.60 | 0.00 | 6.7 | 93.2 | 0.1 | -0.97 | 0.84 | 0.83 | 1.67 | 4.1 | 0.002 | 0.54 | 0.0 | 0.04 | 15.67 | 0.00 | 2.145 | 6.45 | 0.16 | 5.3 | 94.6 | 0.1 | -0.62 | 0.34 | 0.83 | 0.82 | 1.44 | 30005 | 3698 | 33 | 0 | 81 | 0 | 0 | logfile |
✔ | 8ATU | 15663 | 2023-07-18 | 2022-08-24 | 3.3 | 2.76 | 3.44 | 3.2 | 0.003 | 0.76 | 0.0 | 0.04 | 16.63 | 0.01 | 2.263 | 7.30 | 0.36 | 3.5 | 96.5 | 0.0 | -1.00 | 0.54 | 0.70 | 0.73 | 3.2 | 0.002 | 0.61 | 0.0 | 0.04 | 16.78 | 0.00 | 2.182 | 11.22 | 0.24 | 2.5 | 97.5 | 0.0 | 1.30 | 0.50 | 0.55 | 0.72 | 0.84 | 43882 | 5674 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6X0V | 21985 | 2023-07-03 | 2020-05-17 | 4.5 | 4.37 | — | 4.4 | 0.003 | 0.62 | 1.0 | 0.04 | 11.58 | 0.00 | 2.285 | 15.16 | 4.48 | 3.5 | 96.0 | 0.5 | -2.45 | 0.40 | 0.74 | — | 4.4 | 0.002 | 0.49 | 0.0 | 0.04 | 12.98 | 0.00 | 2.224 | 17.83 | 0.00 | 5.0 | 95.0 | 0.0 | 2.29 | 1.20 | 0.40 | 0.76 | — | 1384 | 211 | 4 | 0 | 0 | 0 | 62 | logfile |
✔ | 7L7i | 23213 | 2023-07-07 | 2020-12-28 | 3.3 | 3.85 | — | 3.7 | 0.013 | 1.76 | 3.0 | 0.09 | 14.06 | 0.01 | 2.300 | 1.52 | 0.76 | 3.7 | 96.1 | 0.2 | -1.40 | 0.78 | 0.68 | 3.47 | 3.7 | 0.002 | 0.56 | 0.0 | 0.04 | 15.26 | 0.00 | 2.190 | 7.83 | 0.06 | 3.1 | 96.9 | 0.0 | 0.70 | 1.57 | 0.84 | 0.84 | 2.46 | 14425 | 1775 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7PW4 | 13674 | 2023-07-09 | 2021-10-06 | 3.27 | 3.69 | — | 3.5 | 0.003 | 0.62 | 0.0 | 0.15 | 13.04 | 0.00 | 2.030 | 4.58 | 0.00 | 2.8 | 97.2 | 0.0 | 1.69 | 0.79 | 0.82 | 2.05 | 3.5 | 0.002 | 0.44 | 0.0 | 0.03 | 14.23 | 0.00 | 1.933 | 3.81 | 0.06 | 2.5 | 97.5 | 0.0 | 1.97 | 0.89 | 0.81 | 0.85 | 1.77 | 18965 | 2435 | 5 | 0 | 199 | 0 | 0 | logfile |
✔ | 7oJH | 12951 | 2023-07-05 | 2021-05-15 | 3.1 | 3.40 | 3.12 | 3.3 | 0.011 | 0.90 | 0.0 | 0.05 | 11.01 | 0.00 | 2.240 | 2.92 | 0.52 | 2.9 | 97.1 | 0.0 | 0.37 | 0.70 | 0.83 | 3.56 | 3.3 | 0.002 | 0.53 | 0.0 | 0.04 | 14.62 | 0.00 | 2.245 | 4.58 | 0.10 | 2.9 | 97.1 | 0.0 | 1.25 | 0.99 | 0.71 | 0.87 | 2.71 | 8999 | 1138 | 4 | 0 | 5 | 0 | 0 | logfile |