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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6E0G | 8947 | 2023-11-15 | 2018-07-06 | 2.9 | 2.97 | — | 3.0 | 0.010 | 1.03 | 0.0 | 0.06 | 10.04 | 0.01 | 2.030 | 9.03 | 0.00 | 6.7 | 92.6 | 0.6 | -3.72 | 0.62 | 0.71 | 2.41 | 3.0 | 0.004 | 0.72 | 0.0 | 0.05 | 14.17 | 0.00 | 2.174 | 17.04 | 2.54 | 6.6 | 93.4 | 0.0 | -0.92 | 1.63 | 0.61 | 0.73 | 2.57 | 12910 | 1650 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 5MBV | 3460 | 2023-11-18 | 2016-11-08 | 3.8 | 4.14 | — | 3.8 | 0.002 | 0.51 | 0.0 | 0.04 | 10.21 | 0.00 | 2.172 | 7.06 | 0.74 | 4.7 | 95.2 | 0.1 | -3.37 | 0.87 | 0.81 | 0.98 | 3.8 | 0.004 | 0.71 | 0.0 | 0.04 | 13.50 | 0.00 | 2.114 | 12.19 | 0.23 | 3.9 | 96.0 | 0.0 | 1.12 | 0.89 | 0.88 | 0.83 | 1.41 | 24118 | 3014 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QQ6 | 4619 | 2023-11-15 | 2019-02-17 | 3.3 | 3.40 | — | 3.4 | 0.007 | 1.08 | 2.0 | 0.05 | 15.09 | 0.01 | 1.924 | 5.07 | 0.00 | 6.4 | 93.6 | 0.0 | -5.08 | 0.67 | 0.80 | 2.41 | 3.4 | 0.003 | 0.64 | 0.0 | 0.04 | 15.44 | 0.00 | 2.011 | 9.01 | 0.09 | 5.7 | 94.3 | 0.0 | -0.19 | 1.34 | 0.69 | 0.84 | 2.09 | 12123 | 1486 | 6 | 0 | 13 | 18 | 0 | logfile |
✔ | 7JWY | 22515 | 2023-11-19 | 2020-08-26 | 2.5 | 2.64 | 2.53 | 2.6 | 0.011 | 1.20 | 0.0 | 0.07 | 13.92 | 0.01 | 2.248 | 2.44 | 0.11 | 6.1 | 93.9 | 0.0 | -2.72 | 0.75 | 0.83 | 3.94 | 2.6 | 0.003 | 0.60 | 0.0 | 0.05 | 15.19 | 0.00 | 2.125 | 4.26 | 0.61 | 3.4 | 96.6 | 0.0 | -0.06 | 0.40 | 0.74 | 0.86 | 3.24 | 25860 | 3178 | 26 | 0 | 64 | 119 | 0 | logfile |
✔ | 8GXX | 34364 | 2023-11-20 | 2022-09-21 | 3.0 | 2.61 | 3.12 | 2.9 | 0.006 | 0.56 | 0.0 | 0.04 | 11.56 | 0.00 | 1.758 | 5.57 | 0.06 | 3.0 | 96.9 | 0.0 | 0.65 | 0.67 | 0.82 | 3.77 | 2.8 | 0.003 | 0.59 | 0.0 | 0.04 | 16.97 | 0.00 | 1.956 | 7.51 | 2.76 | 2.1 | 97.9 | 0.0 | 0.94 | 1.10 | 0.74 | 0.85 | 3.19 | 29553 | 3788 | 15 | 0 | 5 | 0 | 0 | logfile |
✔ | 7PDG | 13337 | 2023-11-14 | 2021-08-05 | 4.3 | 4.51 | — | 3.1 | 0.005 | 0.82 | 0.0 | 0.05 | 14.59 | 0.00 | 2.161 | 16.17 | 0.00 | 5.2 | 94.8 | 0.0 | -0.49 | 0.58 | 0.72 | — | 3.1 | 0.003 | 0.73 | 0.0 | 0.04 | 14.74 | 0.00 | 2.173 | 12.63 | 0.00 | 4.3 | 95.7 | 0.0 | 0.21 | 0.88 | 0.58 | 0.72 | — | 7642 | 970 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FYF | 29572 | 2023-11-15 | 2023-01-26 | 3.4 | 3.26 | 3.38 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 14.09 | 0.00 | 2.218 | 5.61 | 0.14 | 2.7 | 97.3 | 0.0 | 2.89 | 0.57 | 0.83 | 1.72 | 3.3 | 0.003 | 0.52 | 0.0 | 0.04 | 14.55 | 0.00 | 2.209 | 5.68 | 0.14 | 2.4 | 97.6 | 0.0 | 3.58 | 0.93 | 0.55 | 0.85 | 1.53 | 13202 | 830 | 4 | 0 | 0 | 0 | 6754 | logfile |
✔ | 7TXi | 26158 | 2023-11-20 | 2022-02-09 | 3.5 | 3.86 | — | 3.7 | 0.008 | 0.99 | 0.0 | 0.05 | 12.09 | 0.01 | 0.409 | 13.97 | 0.00 | 5.7 | 93.8 | 0.5 | 1.39 | 0.53 | 0.82 | 2.16 | 3.6 | 0.003 | 0.80 | 0.0 | 0.05 | 15.08 | 0.01 | 2.129 | 11.75 | 0.22 | 6.5 | 93.0 | 0.5 | 0.91 | 1.29 | 0.54 | 0.83 | 2.34 | 28660 | 3920 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VFL | 21186 | 2023-11-16 | 2020-01-05 | 4.14 | 4.24 | 4.09 | 4.2 | 0.020 | 1.69 | 0.0 | 0.10 | 10.16 | 0.01 | 2.247 | 1.36 | 0.20 | 1.4 | 98.6 | 0.0 | 0.90 | 0.77 | 0.84 | — | 4.2 | 0.007 | 0.83 | 0.0 | 0.05 | 13.18 | 0.00 | 2.054 | 11.25 | 0.00 | 4.1 | 95.9 | 0.0 | 0.15 | 0.85 | 0.77 | 0.85 | — | 14925 | 1710 | 42 | 0 | 102 | 0 | 0 | logfile |
✔ | 7TYN | 26188 | 2023-11-14 | 2022-02-13 | 2.6 | 2.72 | 2.56 | 2.8 | 0.011 | 0.62 | 1.0 | 0.05 | 13.17 | 0.00 | 2.216 | 5.53 | 2.01 | 1.2 | 98.8 | 0.0 | -2.90 | 0.67 | 0.81 | 3.62 | 2.8 | 0.003 | 0.58 | 0.0 | 0.04 | 16.12 | 0.00 | 2.186 | 6.18 | 2.64 | 2.4 | 97.6 | 0.0 | 1.10 | 0.48 | 0.67 | 0.83 | 2.98 | 9364 | 1154 | 7 | 0 | 18 | 0 | 0 | logfile |
✔ | 8DMB | 27533 | 2023-11-16 | 2022-07-08 | 3.1 | 3.10 | 3.12 | 3.1 | 0.005 | 0.91 | 0.0 | 0.05 | 15.85 | 0.01 | 2.091 | 0.28 | 0.74 | 2.5 | 97.5 | 0.0 | 0.39 | 0.69 | 0.81 | 4.57 | 3.1 | 0.003 | 0.56 | 0.0 | 0.03 | 16.37 | 0.01 | 1.919 | 3.44 | 0.00 | 2.5 | 97.5 | 0.0 | 0.46 | 0.54 | 0.70 | 0.83 | 4.36 | 14225 | 328 | 5 | 275 | 2 | 0 | 5728 | logfile |
✔ | 7PBW | 13307 | 2023-11-14 | 2021-08-02 | 2.1 | 1.98 | — | 2.1 | 0.009 | 0.99 | 0.0 | 0.05 | 12.27 | 0.01 | 2.243 | 2.93 | 0.00 | 0.0 | 100.0 | 0.0 | 3.14 | 0.78 | 0.90 | 7.90 | 2.1 | 0.004 | 0.76 | 0.0 | 0.04 | 14.47 | 0.01 | 2.150 | 7.99 | 0.00 | 0.0 | 100.0 | 0.0 | 4.46 | 0.28 | 0.77 | 0.90 | 7.32 | 9500 | 873 | 54 | 0 | 81 | 230 | 0 | logfile |
✔ | 7NPU | 12521 | 2023-11-17 | 2021-02-28 | 4.48 | 4.74 | 4.43 | 3.8 | 0.008 | 1.19 | 0.0 | 0.06 | 11.87 | 0.01 | 2.086 | 1.37 | 0.37 | 1.8 | 98.1 | 0.1 | -0.61 | 0.66 | 0.68 | — | 3.8 | 0.003 | 0.60 | 0.0 | 0.04 | 12.55 | 0.00 | 1.902 | 8.02 | 0.00 | 2.8 | 97.2 | 0.0 | 1.44 | 3.28 | 0.69 | 0.76 | — | 126727 | 8230 | 24 | 0 | 0 | 0 | 64397 | logfile |
✔ | 7RZ9 | 24755 | 2023-11-19 | 2021-08-27 | 4.15 | 3.58 | — | 4.1 | 0.007 | 0.98 | 0.0 | 0.05 | 10.41 | 0.01 | 2.264 | 3.46 | 0.26 | 5.6 | 94.4 | 0.0 | -5.15 | 0.68 | 0.80 | — | 4.1 | 0.003 | 0.60 | 0.0 | 0.04 | 13.04 | 0.00 | 2.174 | 8.74 | 0.00 | 3.5 | 96.5 | 0.0 | 0.04 | 1.16 | 0.69 | 0.78 | — | 27934 | 3550 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DE7 | 27386 | 2023-11-13 | 2022-06-20 | 3.27 | 4.01 | 3.23 | 3.8 | 0.006 | 1.05 | 0.0 | 0.06 | 15.00 | 0.01 | 2.304 | 8.39 | 0.90 | 2.1 | 97.9 | 0.0 | 4.08 | 0.61 | 0.78 | 1.97 | 3.8 | 0.005 | 1.04 | 0.0 | 0.05 | 16.61 | 0.01 | 2.034 | 22.33 | 0.67 | 3.3 | 96.7 | 0.0 | 1.70 | 1.46 | 0.58 | 0.77 | 1.03 | 4168 | 526 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6X68 | 22073 | 2023-11-15 | 2020-05-27 | 3.66 | 3.88 | — | 3.8 | 0.012 | 1.74 | 10.0 | 0.09 | 20.68 | 0.01 | 1.652 | 4.17 | 0.57 | 2.5 | 97.2 | 0.3 | -0.38 | 0.72 | 0.77 | 1.47 | 3.8 | 0.004 | 0.82 | 0.0 | 0.04 | 23.13 | 0.01 | 2.151 | 10.76 | 0.23 | 5.1 | 94.9 | 0.0 | -0.30 | 0.85 | 0.67 | 0.80 | 0.94 | 10246 | 956 | 7 | 124 | 8 | 0 | 0 | logfile |
✔ | 7F24 | 31427 | 2023-11-15 | 2021-06-10 | 4.16 | 4.05 | — | 4.0 | 0.009 | 1.05 | 0.0 | 0.06 | 15.53 | 0.01 | 2.076 | 24.77 | 0.65 | 5.1 | 94.8 | 0.1 | -2.40 | 0.69 | 0.76 | — | 4.0 | 0.003 | 0.72 | 0.0 | 0.05 | 14.76 | 0.00 | 2.180 | 18.15 | 0.26 | 3.8 | 96.2 | 0.0 | 0.02 | 1.38 | 0.69 | 0.75 | — | 7165 | 900 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7S7B | 24882 | 2023-11-18 | 2021-09-15 | 4.06 | 3.82 | — | 3.6 | 0.004 | 0.46 | 0.0 | 0.04 | 10.74 | 0.00 | 1.963 | 8.58 | 1.54 | 7.9 | 92.1 | 0.0 | 0.42 | 0.81 | 0.80 | — | 3.6 | 0.004 | 0.63 | 0.0 | 0.04 | 12.64 | 0.00 | 2.184 | 10.11 | 0.04 | 6.2 | 93.8 | 0.0 | 0.46 | 0.62 | 0.82 | 0.81 | — | 22217 | 2709 | 10 | 22 | 2 | 0 | 0 | logfile |
✔ | 8CPW | 16788 | 2023-11-21 | 2023-03-03 | 1.79 | 1.64 | 1.78 | 1.7 | 0.005 | 0.84 | 0.0 | 0.06 | 14.35 | 0.01 | 2.180 | 3.39 | 0.63 | 1.0 | 99.0 | 0.0 | 2.13 | 0.77 | 0.83 | 8.34 | 1.6 | 0.004 | 0.71 | 0.0 | 0.04 | 14.75 | 0.00 | 2.215 | 4.05 | 0.41 | 1.2 | 98.8 | 0.0 | 3.93 | 0.22 | 0.77 | 0.85 | 7.73 | 36004 | 4152 | 72 | 0 | 38 | 1886 | 0 | logfile |
✔ | 7QLA | 14066 | 2023-11-14 | 2021-12-20 | 3.85 | 3.91 | 3.77 | 3.9 | 0.003 | 0.62 | 0.0 | 0.04 | 13.83 | 0.00 | 2.117 | 13.19 | 0.00 | 6.4 | 93.6 | 0.0 | -1.33 | 0.72 | 0.76 | 1.18 | 3.8 | 0.003 | 0.76 | 0.0 | 0.04 | 15.73 | 0.00 | 2.136 | 14.14 | 0.41 | 5.3 | 94.7 | 0.0 | -0.81 | 0.52 | 0.73 | 0.76 | 1.64 | 6837 | 874 | 2 | 0 | 0 | 0 | 0 | logfile |