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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Boi | 12244 | 2022-04-08 | 2021-01-25 | 2.98 | 3.76 | 2.97 | 2.9 | 0.008 | 0.77 | 3.0 | 0.05 | 14.52 | 0.02 | 1.934 | 16.29 | 0.00 | 3.6 | 96.4 | 0.0 | -1.74 | 0.89 | 0.91 | 1.58 | 2.9 | 0.008 | 0.78 | 0.0 | 0.04 | 15.26 | 0.01 | 1.868 | 18.99 | 4.33 | 4.6 | 95.4 | 0.0 | -0.41 | 0.51 | 0.89 | 0.92 | 1.67 | 35970 | 1617 | 16 | 1078 | 74 | 0 | 0 | logfile |
✔ | 7AFo | 11772 | 2022-04-08 | 2020-09-19 | 3.93 | 5.33 | 3.93 | 3.2 | 0.014 | 1.98 | 7.0 | 0.10 | 16.54 | 0.04 | 1.857 | 1.91 | 0.71 | 4.2 | 95.8 | 0.0 | -1.97 | 0.91 | 0.88 | 1.13 | 3.1 | 0.005 | 0.75 | 0.0 | 0.04 | 16.52 | 0.01 | 1.868 | 30.94 | 0.50 | 4.6 | 95.3 | 0.1 | -1.15 | 2.54 | 0.91 | 0.89 | 0.46 | 34134 | 1691 | 16 | 971 | 20 | 0 | 0 | logfile |
✔ | 7LD5 | 23282 | 2022-04-05 | 2021-01-12 | 3.07 | 3.46 | — | 3.4 | 0.006 | 0.67 | 0.0 | 0.05 | 16.01 | 0.00 | 2.102 | 8.95 | 6.51 | 4.3 | 95.7 | 0.0 | -2.06 | 0.77 | 0.82 | 2.94 | 3.4 | 0.003 | 0.55 | 0.0 | 0.04 | 15.94 | 0.00 | 2.160 | 7.17 | 0.29 | 2.4 | 97.6 | 0.0 | 1.02 | 0.35 | 0.74 | 0.82 | 2.96 | 13542 | 1761 | 9 | 15 | 6 | 0 | 0 | logfile |
✔ | 6XLB | 22238 | 2022-04-05 | 2020-06-28 | 3.8 | 4.01 | — | 3.8 | 0.002 | 0.43 | 0.0 | 0.04 | 13.65 | 0.00 | 2.235 | 7.33 | 0.00 | 2.0 | 98.0 | 0.0 | -2.43 | 0.82 | 0.77 | 1.14 | 3.8 | 0.004 | 0.73 | 0.0 | 0.05 | 16.18 | 0.00 | 2.094 | 18.24 | 0.48 | 3.1 | 96.9 | 0.0 | -0.51 | 0.90 | 0.84 | 0.81 | 1.55 | 11180 | 1380 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AF5 | 11753 | 2022-04-06 | 2020-09-19 | 2.96 | 3.21 | 2.95 | 2.9 | 0.008 | 0.74 | 2.0 | 0.05 | 14.96 | 0.02 | 1.876 | 10.20 | 0.00 | 4.6 | 95.4 | 0.0 | -1.98 | 0.85 | 0.87 | 2.87 | 2.9 | 0.007 | 0.78 | 0.0 | 0.04 | 15.93 | 0.01 | 1.844 | 13.24 | 3.26 | 4.1 | 95.8 | 0.1 | 0.12 | 1.21 | 0.86 | 0.90 | 2.62 | 18531 | 1104 | 11 | 456 | 53 | 0 | 0 | logfile |
✔ | 7NYW | 12656 | 2022-04-09 | 2021-03-23 | 3.1 | 3.76 | 3.13 | 3.2 | 0.003 | 0.50 | 0.0 | 0.04 | 18.04 | 0.00 | 1.891 | 6.07 | 0.00 | 3.7 | 96.3 | 0.0 | 1.43 | 0.83 | 0.79 | 1.86 | 3.2 | 0.003 | 0.49 | 0.0 | 0.04 | 18.54 | 0.00 | 1.855 | 6.50 | 0.08 | 3.6 | 96.4 | 0.0 | 2.00 | 0.47 | 0.84 | 0.83 | 1.82 | 48568 | 2795 | 18 | 104 | 6 | 0 | 23780 | logfile |
✔ | 7MBV | 23748 | 2022-04-07 | 2021-04-01 | 2.8 | 3.34 | — | 3.0 | 0.019 | 0.73 | 0.0 | 0.09 | 13.24 | 0.01 | 2.280 | 6.88 | 0.00 | 2.3 | 97.7 | 0.0 | 1.48 | 0.77 | 0.82 | 3.83 | 3.1 | 0.004 | 0.57 | 0.0 | 0.04 | 14.88 | 0.00 | 2.310 | 6.52 | 1.45 | 2.6 | 97.4 | 0.0 | 2.06 | 0.45 | 0.74 | 0.90 | 3.46 | 30804 | 3984 | 8 | 0 | 24 | 0 | 0 | logfile |
✔ | 6XLG | 22243 | 2022-04-05 | 2020-06-28 | 2.71 | 2.81 | — | 2.8 | 0.001 | 0.36 | 0.0 | 0.04 | 10.12 | 0.00 | 2.105 | 5.84 | 0.00 | 1.3 | 98.7 | 0.0 | -3.01 | 0.73 | 0.81 | 4.05 | 2.8 | 0.003 | 0.56 | 0.0 | 0.04 | 16.65 | 0.00 | 2.000 | 8.70 | 1.78 | 2.2 | 97.8 | 0.0 | -0.16 | 3.07 | 0.77 | 0.88 | 4.10 | 12258 | 1504 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 7o3W | 12710 | 2022-04-08 | 2021-04-03 | 4.9 | 6.81 | 5.80 | 7.1 | 0.017 | 1.84 | 0.0 | 0.11 | 18.08 | 0.01 | 0.360 | 24.19 | 0.30 | 3.5 | 96.4 | 0.2 | 1.74 | 0.66 | 0.54 | — | 7.1 | 0.004 | 0.93 | 0.0 | 0.04 | 15.63 | 0.01 | 1.980 | 27.90 | 0.02 | 1.7 | 98.2 | 0.1 | 1.48 | 2.40 | 0.75 | 0.81 | — | 138390 | 17976 | 98 | 0 | 14 | 0 | 0 | logfile |
✔ | 7o40 | 12713 | 2022-04-11 | 2021-04-03 | 4.3 | 6.44 | 4.63 | 6.7 | 0.017 | 1.92 | 1.0 | 0.11 | 18.05 | 0.01 | 0.592 | 10.79 | 1.09 | 2.1 | 97.3 | 0.7 | 3.48 | 0.59 | 0.48 | — | 6.7 | 0.004 | 0.96 | 0.0 | 0.05 | 15.30 | 0.00 | 2.032 | 26.40 | 0.02 | 1.6 | 98.3 | 0.1 | 1.66 | 2.04 | 0.73 | 0.83 | — | 168181 | 21862 | 119 | 0 | 17 | 0 | 0 | logfile |
✔ | 7F4G | 31450 | 2022-04-07 | 2021-06-18 | 2.78 | 3.30 | — | 3.2 | 0.017 | 1.11 | 4.0 | 0.07 | 14.67 | 0.01 | 1.898 | 14.93 | 1.43 | 8.7 | 91.0 | 0.3 | -3.97 | 0.69 | 0.81 | 3.30 | 3.2 | 0.003 | 0.68 | 0.0 | 0.05 | 16.88 | 0.00 | 2.124 | 11.59 | 2.69 | 5.6 | 94.4 | 0.0 | -0.37 | 1.19 | 0.59 | 0.73 | 2.37 | 27957 | 3491 | 17 | 0 | 5 | 0 | 0 | logfile |
✔ | 7AFN | 11771 | 2022-04-06 | 2020-09-19 | 3.86 | 5.27 | 3.89 | 3.0 | 0.009 | 1.02 | 3.0 | 0.07 | 17.92 | 0.02 | 1.755 | 23.03 | 0.00 | 6.9 | 93.1 | 0.0 | -1.93 | 0.90 | 0.83 | 0.72 | 3.0 | 0.004 | 0.75 | 0.0 | 0.04 | 17.09 | 0.01 | 1.889 | 24.66 | 0.65 | 4.1 | 95.9 | 0.0 | 0.13 | 1.72 | 0.91 | 0.88 | 0.80 | 18520 | 1108 | 11 | 456 | 12 | 0 | 0 | logfile |
✔ | 7AFD | 11761 | 2022-04-06 | 2020-09-19 | 3.44 | 4.47 | 3.35 | 2.4 | 0.009 | 0.89 | 3.0 | 0.05 | 16.75 | 0.02 | 1.850 | 29.99 | 0.00 | 6.2 | 93.8 | 0.0 | -2.70 | 0.89 | 0.85 | 0.96 | 2.3 | 0.004 | 0.76 | 0.0 | 0.04 | 16.84 | 0.01 | 1.858 | 25.08 | 0.98 | 5.1 | 94.8 | 0.1 | -0.74 | 1.33 | 0.90 | 0.88 | 1.39 | 18531 | 1108 | 12 | 456 | 23 | 0 | 0 | logfile |
✔ | 7AFH | 11765 | 2022-04-06 | 2020-09-19 | 3.59 | 4.69 | 6.66 | 2.8 | 0.009 | 0.89 | 2.0 | 0.05 | 16.84 | 0.02 | 1.752 | 32.72 | 0.00 | 7.5 | 92.5 | 0.0 | -2.59 | 0.88 | 0.82 | 0.54 | 2.8 | 0.008 | 0.90 | 0.0 | 0.04 | 17.27 | 0.01 | 1.692 | 35.19 | 0.98 | 5.6 | 94.4 | 0.0 | -1.09 | 1.30 | 0.89 | 0.86 | 0.80 | 18482 | 1103 | 11 | 456 | 12 | 0 | 0 | logfile |
✔ | 7AFK | 11768 | 2022-04-06 | 2020-09-19 | 4.9 | 5.45 | 4.73 | 3.0 | 0.008 | 0.88 | 1.0 | 0.05 | 18.40 | 0.02 | 1.519 | 42.19 | 0.00 | 8.4 | 91.6 | 0.0 | -2.88 | 0.87 | 0.80 | — | 2.7 | 0.004 | 0.73 | 0.0 | 0.04 | 17.62 | 0.01 | 1.846 | 36.58 | 0.00 | 5.7 | 94.3 | 0.0 | -1.09 | 0.77 | 0.88 | 0.85 | — | 18521 | 1108 | 11 | 456 | 13 | 0 | 0 | logfile |
✔ | 7AFA | 11758 | 2022-04-06 | 2020-09-19 | 2.95 | 3.82 | 2.97 | 2.9 | 0.008 | 0.80 | 6.0 | 0.05 | 14.29 | 0.02 | 1.456 | 11.42 | 0.00 | 2.9 | 97.1 | 0.0 | -1.10 | 0.86 | 0.88 | 1.92 | 2.9 | 0.007 | 0.88 | 0.0 | 0.04 | 15.42 | 0.01 | 1.828 | 21.06 | 2.94 | 4.3 | 95.7 | 0.0 | -0.18 | 1.27 | 0.87 | 0.91 | 1.91 | 18482 | 1101 | 11 | 456 | 26 | 0 | 0 | logfile |
✔ | 7AFL | 11769 | 2022-04-08 | 2020-09-19 | 4.2 | 5.13 | 4.56 | 3.0 | 0.010 | 1.08 | 6.0 | 0.06 | 17.44 | 0.01 | 1.852 | 43.68 | 0.00 | 6.0 | 94.0 | 0.0 | -1.84 | 0.89 | 0.87 | — | 2.8 | 0.006 | 0.72 | 0.0 | 0.04 | 16.52 | 0.01 | 1.822 | 40.79 | 0.00 | 6.1 | 93.9 | 0.0 | -1.34 | 0.73 | 0.89 | 0.88 | — | 34322 | 1487 | 15 | 1054 | 25 | 0 | 0 | logfile |
✔ | 7AFi | 11766 | 2022-04-08 | 2020-09-19 | 3.53 | 4.65 | 3.55 | 2.4 | 0.011 | 0.99 | 8.0 | 0.06 | 16.69 | 0.01 | 1.836 | 33.77 | 0.00 | 9.0 | 91.0 | 0.0 | -2.95 | 0.91 | 0.89 | 0.98 | 2.4 | 0.005 | 0.68 | 0.0 | 0.03 | 16.15 | 0.01 | 1.855 | 27.11 | 1.57 | 4.8 | 95.2 | 0.0 | -0.92 | 1.29 | 0.91 | 0.89 | 0.84 | 33803 | 1387 | 14 | 1066 | 46 | 0 | 0 | logfile |
✔ | 7NAS | 12246 | 2022-04-08 | 2021-01-25 | 3.31 | 4.38 | 7.71 | 2.7 | 0.009 | 0.80 | 3.0 | 0.05 | 15.55 | 0.01 | 1.629 | 25.97 | 0.00 | 8.1 | 91.9 | 0.0 | -3.73 | 0.90 | 0.90 | 1.47 | 2.7 | 0.008 | 0.80 | 0.0 | 0.04 | 16.02 | 0.01 | 1.729 | 30.72 | 0.75 | 6.2 | 93.8 | 0.0 | -1.33 | 1.21 | 0.90 | 0.91 | 1.44 | 32390 | 1454 | 15 | 974 | 43 | 0 | 0 | logfile |
✔ | 7AF8 | 11756 | 2022-04-06 | 2020-09-19 | 2.75 | 3.17 | 2.81 | 2.9 | 0.006 | 0.62 | 4.0 | 0.04 | 13.77 | 0.02 | 2.002 | 6.53 | 0.00 | 3.6 | 96.4 | 0.0 | -0.93 | 0.84 | 0.87 | 2.54 | 2.9 | 0.003 | 0.68 | 0.0 | 0.04 | 15.16 | 0.01 | 1.953 | 9.84 | 4.02 | 4.3 | 95.6 | 0.1 | 0.98 | 0.53 | 0.85 | 0.90 | 2.15 | 18565 | 1109 | 11 | 456 | 52 | 0 | 0 | logfile |