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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6Y6X | 10709 | 2024-03-19 | 2020-02-27 | 2.8 | 2.76 | — | 2.7 | 0.007 | 1.01 | 0.0 | 0.07 | 24.05 | 0.01 | 1.914 | 4.55 | 0.96 | 7.0 | 92.7 | 0.3 | -2.80 | 0.80 | 0.87 | 3.06 | 2.7 | 0.007 | 0.74 | 0.0 | 0.05 | 23.83 | 0.01 | 1.794 | 9.77 | 2.87 | 6.9 | 93.1 | 0.1 | -0.40 | 1.16 | 0.82 | 0.91 | 3.05 | 140969 | 6788 | 60 | 4049 | 235 | 0 | 0 | logfile |
✔ | 6XLA | 22237 | 2024-03-10 | 2020-06-28 | 3.1 | 3.41 | — | 3.3 | 0.005 | 0.65 | 0.0 | 0.04 | 19.96 | 0.00 | 2.276 | 3.37 | 0.00 | 0.2 | 99.8 | 0.0 | -2.59 | 0.78 | 0.84 | 3.37 | 3.3 | 0.004 | 0.57 | 0.0 | 0.04 | 20.70 | 0.00 | 2.109 | 5.11 | 2.04 | 3.0 | 97.0 | 0.0 | -0.43 | 1.31 | 0.79 | 0.86 | 2.97 | 5403 | 536 | 6 | 46 | 2 | 0 | 0 | logfile |
✔ | 7QD5 | 13908 | 2024-03-17 | 2021-11-26 | 3.1 | 3.21 | 3.05 | 3.1 | 0.005 | 0.82 | 0.0 | 0.05 | 19.64 | 0.01 | 2.266 | 2.08 | 0.13 | 2.4 | 97.6 | 0.0 | -0.83 | 0.72 | 0.71 | 2.46 | 3.1 | 0.003 | 0.53 | 0.0 | 0.04 | 21.02 | 0.00 | 2.200 | 6.20 | 1.42 | 2.4 | 97.6 | 0.0 | 2.39 | 0.37 | 0.74 | 0.74 | 1.65 | 18380 | 1816 | 6 | 180 | 0 | 0 | 0 | logfile |
✔ | 7YM8 | 33924 | 2024-03-10 | 2022-07-27 | 2.92 | 3.14 | 2.90 | 3.2 | 0.006 | 0.86 | 0.0 | 0.05 | 16.01 | 0.01 | 2.331 | 4.04 | 0.00 | 4.2 | 95.8 | 0.0 | -3.62 | 0.68 | 0.81 | 3.68 | 3.2 | 0.002 | 0.53 | 0.0 | 0.04 | 16.18 | 0.00 | 2.228 | 6.41 | 1.86 | 3.5 | 96.5 | 0.0 | 0.28 | 0.39 | 0.65 | 0.82 | 3.04 | 4287 | 556 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6UE9 | 20751 | 2024-03-17 | 2019-09-20 | 2.9 | 3.89 | — | 4.2 | 0.007 | 1.05 | 0.0 | 0.06 | 14.61 | 0.01 | 2.241 | 3.10 | 0.32 | 11.2 | 88.8 | 0.0 | -3.87 | 0.59 | 0.37 | 0.26 | 3.6 | 0.004 | 1.00 | 0.0 | 0.05 | 15.55 | 0.01 | 2.152 | 11.81 | 2.34 | 7.4 | 92.6 | 0.0 | -1.74 | 1.74 | 0.78 | 0.81 | 1.73 | 18227 | 2475 | 17 | 0 | 12 | 0 | 0 | logfile |
✔ | 7oDE | 12826 | 2024-03-19 | 2021-04-29 | 2.84 | 2.98 | 2.78 | 2.9 | 0.003 | 0.38 | 0.0 | 0.03 | 22.76 | 0.01 | 1.949 | 3.00 | 3.32 | 2.0 | 98.0 | 0.0 | -0.12 | 0.82 | 0.80 | 3.61 | 2.8 | 0.006 | 0.62 | 0.0 | 0.04 | 22.90 | 0.01 | 1.866 | 6.28 | 2.98 | 4.2 | 95.8 | 0.0 | -0.16 | 0.54 | 0.85 | 0.84 | 3.35 | 92524 | 1761 | 16 | 1990 | 0 | 0 | 35996 | logfile |
✔ | 8C92 | 16499 | 2024-03-10 | 2023-01-21 | 3.79 | 4.24 | 4.02 | 3.8 | 0.002 | 0.38 | 0.0 | 0.03 | 22.72 | 0.00 | 1.872 | 5.69 | 0.00 | 4.5 | 95.4 | 0.1 | 0.46 | 0.83 | 0.79 | 1.60 | 3.8 | 0.003 | 0.54 | 0.0 | 0.03 | 23.05 | 0.00 | 2.032 | 15.59 | 3.53 | 7.0 | 93.0 | 0.0 | -0.87 | 0.53 | 0.84 | 0.83 | 1.67 | 53489 | 1700 | 17 | 1873 | 0 | 0 | 0 | logfile |
✔ | 8C94 | 16501 | 2024-03-11 | 2023-01-21 | 3.8 | 4.29 | 4.13 | 3.8 | 0.002 | 0.41 | 0.0 | 0.03 | 22.44 | 0.00 | 1.610 | 7.44 | 0.00 | 5.3 | 94.7 | 0.0 | 0.23 | 0.79 | 0.79 | 1.17 | 3.9 | 0.006 | 0.74 | 0.0 | 0.04 | 23.16 | 0.01 | 1.946 | 25.45 | 3.87 | 10.3 | 89.6 | 0.1 | -1.91 | 1.43 | 0.81 | 0.84 | 1.30 | 54560 | 2070 | 21 | 1787 | 0 | 0 | 0 | logfile |
✔ | 7YWA | 34151 | 2024-03-10 | 2022-08-22 | 3.26 | 2.85 | 3.14 | 3.1 | 0.006 | 0.87 | 0.0 | 0.05 | 18.91 | 0.00 | 1.718 | 11.41 | 0.85 | 3.0 | 97.0 | 0.0 | 0.53 | 0.37 | 0.69 | 2.31 | 3.1 | 0.003 | 0.52 | 0.0 | 0.04 | 19.16 | 0.00 | 1.966 | 11.50 | 4.09 | 2.4 | 97.6 | 0.0 | 0.86 | 0.50 | 0.44 | 0.73 | 2.05 | 5808 | 744 | 6 | 6 | 4 | 0 | 0 | logfile |
✔ | 8G30 | 29686 | 2024-03-18 | 2023-02-06 | 3.1 | 4.00 | 3.09 | 3.6 | 0.016 | 1.87 | 0.0 | 0.09 | 16.96 | 0.01 | 2.213 | 0.83 | 0.56 | 6.2 | 93.5 | 0.3 | -1.88 | 0.83 | 0.87 | 3.70 | 3.6 | 0.004 | 0.74 | 0.0 | 0.04 | 13.77 | 0.00 | 2.159 | 10.75 | 2.49 | 3.4 | 96.4 | 0.2 | -0.39 | 0.66 | 0.79 | 0.82 | 3.01 | 20449 | 2503 | 40 | 0 | 91 | 0 | 0 | logfile |
✔ | 7TAD | 25771 | 2024-03-11 | 2021-12-20 | 3.6 | 3.82 | — | 3.8 | 0.003 | 0.70 | 0.0 | 0.04 | 14.28 | 0.01 | 2.126 | 10.39 | 0.00 | 2.8 | 97.2 | 0.0 | 0.68 | 0.62 | 0.64 | 1.42 | 3.8 | 0.002 | 0.59 | 0.0 | 0.04 | 16.03 | 0.00 | 2.191 | 8.10 | 1.12 | 1.7 | 98.3 | 0.0 | 2.74 | 0.49 | 0.64 | 0.67 | 1.20 | 8550 | 1113 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8C8Y | 16495 | 2024-03-17 | 2023-01-21 | 3.03 | 3.24 | 3.11 | 3.1 | 0.002 | 0.40 | 0.0 | 0.03 | 22.85 | 0.00 | 1.796 | 4.85 | 0.00 | 6.2 | 93.7 | 0.1 | 0.29 | 0.77 | 0.81 | 2.49 | 3.1 | 0.005 | 0.62 | 0.0 | 0.04 | 23.05 | 0.00 | 2.004 | 10.10 | 3.98 | 7.9 | 92.0 | 0.1 | -1.27 | 0.46 | 0.80 | 0.87 | 2.56 | 77316 | 2566 | 25 | 2667 | 0 | 0 | 0 | logfile |
✔ | 8DTF | 27696 | 2024-03-15 | 2022-07-25 | 3.7 | 3.84 | 3.71 | 3.7 | 0.003 | 0.72 | 0.0 | 0.04 | 11.94 | 0.01 | 2.250 | 8.95 | 0.00 | 4.4 | 95.6 | 0.0 | 0.35 | 0.83 | 0.79 | 2.41 | 3.7 | 0.002 | 0.60 | 0.0 | 0.04 | 14.40 | 0.00 | 2.265 | 9.20 | 1.23 | 2.1 | 97.9 | 0.0 | 2.62 | 1.36 | 0.85 | 0.85 | 1.52 | 12414 | 1606 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LiM | 23383 | 2024-03-15 | 2021-01-27 | 2.75 | 2.92 | — | 2.9 | 0.007 | 1.05 | 60.0 | 0.06 | 15.61 | 0.01 | 2.436 | 3.47 | 3.49 | 3.5 | 96.5 | 0.0 | -2.97 | 0.74 | 0.84 | 3.83 | 3.0 | 0.005 | 0.88 | 0.0 | 0.05 | 18.08 | 0.01 | 2.257 | 3.71 | 2.43 | 3.9 | 96.1 | 0.0 | -2.51 | 0.29 | 0.76 | 0.86 | 3.13 | 127440 | 15480 | 60 | 0 | 60 | 0 | 0 | logfile |
✔ | 5MPD | 3534 | 2024-03-24 | 2016-12-16 | 4.1 | 4.14 | — | 4.1 | 0.035 | 3.40 | 330.0 | 0.20 | 17.76 | 0.03 | 0.656 | 3.82 | 2.78 | 5.6 | 92.3 | 2.1 | -2.14 | 0.21 | 0.37 | — | 4.1 | 0.004 | 0.84 | 0.0 | 0.04 | 15.47 | 0.00 | 2.060 | 18.49 | 0.02 | 6.2 | 93.6 | 0.2 | -0.95 | 1.33 | 0.28 | 0.61 | — | 40974 | 5142 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KMF | 0724 | 2024-03-11 | 2019-07-31 | 3.6 | 3.51 | — | 4.0 | 0.006 | 0.90 | 0.0 | 0.06 | 14.66 | 0.01 | 2.298 | 5.31 | 0.62 | 13.4 | 86.6 | 0.0 | -4.41 | 0.52 | 0.80 | 2.69 | 4.0 | 0.003 | 0.64 | 0.0 | 0.04 | 16.22 | 0.00 | 2.139 | 9.51 | 3.48 | 8.1 | 91.9 | 0.0 | -2.99 | 0.46 | 0.52 | 0.79 | 2.63 | 7704 | 1011 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6V3K | 21038 | 2024-03-15 | 2019-11-25 | 3.4 | 3.77 | 3.45 | 3.7 | 0.006 | 0.73 | 0.0 | 0.04 | 19.80 | 0.01 | 1.659 | 9.64 | 0.19 | 4.9 | 95.1 | 0.0 | -2.30 | 0.76 | 0.88 | 3.33 | 3.7 | 0.005 | 0.58 | 0.0 | 0.04 | 20.39 | 0.00 | 1.897 | 7.74 | 2.04 | 3.7 | 96.3 | 0.0 | 0.21 | 0.88 | 0.68 | 0.89 | 3.00 | 11314 | 1226 | 16 | 72 | 10 | 0 | 0 | logfile |
✔ | 6WBN | 21594 | 2024-03-23 | 2020-03-26 | 2.83 | 3.46 | — | 3.1 | 0.010 | 0.88 | 0.0 | 0.05 | 16.95 | 0.00 | 2.069 | 12.73 | 0.80 | 4.5 | 95.5 | 0.0 | -0.59 | 0.78 | 0.83 | 3.00 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 15.26 | 0.00 | 2.213 | 6.73 | 2.25 | 2.9 | 97.1 | 0.0 | 2.04 | 1.51 | 0.79 | 0.87 | 3.09 | 38402 | 4774 | 28 | 0 | 84 | 0 | 0 | logfile |
✔ | 7LQV | 23489 | 2024-03-21 | 2021-02-15 | 3.25 | 3.89 | 3.38 | 3.6 | 0.003 | 0.56 | 0.0 | 0.04 | 13.96 | 0.00 | 2.020 | 4.78 | 0.06 | 5.4 | 94.6 | 0.0 | -0.41 | 0.78 | 0.77 | 1.95 | 3.7 | 0.004 | 0.60 | 0.0 | 0.04 | 14.75 | 0.00 | 2.155 | 9.44 | 1.40 | 6.7 | 93.3 | 0.0 | -0.61 | 0.48 | 0.79 | 0.81 | 1.82 | 31274 | 3980 | 12 | 0 | 28 | 0 | 0 | logfile |
✔ | 7A7C | 11677 | 2024-03-14 | 2020-08-27 | 3.16 | 3.66 | 3.23 | 3.5 | 0.003 | 0.54 | 0.0 | 0.04 | 13.51 | 0.00 | 2.199 | 6.63 | 0.00 | 4.5 | 95.5 | 0.0 | -0.97 | 0.82 | 0.87 | 3.57 | 3.5 | 0.003 | 0.53 | 0.0 | 0.04 | 14.65 | 0.00 | 2.163 | 6.74 | 0.74 | 4.0 | 96.0 | 0.0 | -0.07 | 0.24 | 0.82 | 0.88 | 3.21 | 9387 | 1226 | 2 | 0 | 1 | 0 | 0 | logfile |