Table showing results for December 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7CQi	30441	2021-12-01	2020-08-11	3.2	3.33	—	3.3	0.012	1.51	5.0	0.09	16.80	0.01	0.997	19.68	13.06	10.7	88.6	0.7	-5.50	0.71	0.85	3.34	3.3	0.003	0.71	0.0	0.04	16.37	0.01	2.081	6.65	0.21	6.1	93.8	0.1	-2.04	2.28	0.71	0.86	2.67	8881	1117	6	0	2	0	0	logfile
✔	7KTU	23030	2021-12-01	2020-11-24	4.15	4.49	—	4.2	0.006	1.05	0.0	0.05	12.61	0.01	2.259	12.84	0.37	4.3	95.7	0.0	-5.35	0.81	0.79	—	4.2	0.003	0.78	0.0	0.04	13.34	0.00	2.145	19.43	0.00	3.8	96.2	0.0	-0.11	0.90	0.80	0.77	—	7577	995	1	0	0	0	0	logfile
✔	7KTV	23031	2021-12-01	2020-11-24	4.5	4.83	—	4.5	0.006	1.06	0.0	0.06	12.50	0.01	2.221	17.73	0.12	6.5	93.5	0.0	-5.20	0.80	0.79	—	6.7	0.003	0.75	0.0	0.04	13.26	0.00	2.123	21.97	0.12	4.4	95.6	0.0	-0.21	0.83	0.79	0.77	—	7577	995	1	0	0	0	0	logfile
✔	7KTW	23032	2021-12-01	2020-11-24	4.27	4.73	—	4.4	0.007	1.12	0.0	0.05	12.46	0.01	2.214	14.28	0.12	5.1	94.9	0.0	-4.61	0.81	0.82	—	4.4	0.003	0.79	0.0	0.04	13.24	0.00	2.137	19.56	0.12	3.3	96.7	0.0	0.47	0.94	0.80	0.80	—	7577	995	1	0	0	0	0	logfile
✔	7DSQ	30841	2021-12-01	2020-12-31	3.4	3.49	—	3.5	0.010	1.19	0.0	0.49	15.73	0.01	2.292	5.94	0.89	8.8	90.3	0.9	-4.52	0.64	0.82	1.74	3.5	0.003	1.21	0.0	0.11	16.30	0.00	2.204	6.80	0.38	7.3	92.6	0.1	-0.16	0.60	0.65	0.82	1.48	7507	935	7	0	11	15	0	logfile
✔	7CQK	30442	2021-12-01	2020-08-11	3.3	3.38	—	3.3	0.010	1.35	3.0	0.08	19.24	0.01	0.963	29.86	21.66	11.3	87.7	1.0	-5.35	0.70	0.84	2.60	3.3	0.007	1.03	0.0	0.04	17.15	0.01	2.241	6.62	0.11	5.5	94.4	0.1	-1.60	2.01	0.72	0.86	2.42	8859	1116	7	0	2	0	0	logfile
✔	7DA5	30623	2021-12-01	2020-10-14	3.3	3.66	—	3.8	0.008	1.21	10.0	0.09	16.47	0.01	1.673	16.04	10.06	9.1	90.6	0.3	-3.63	0.43	0.58	1.81	3.8	0.006	0.95	0.0	0.04	16.25	0.01	2.240	10.26	0.61	5.6	94.4	0.0	-0.12	1.50	0.50	0.72	2.47	4013	591	2	0	0	0	0	logfile
✔	7CKR	30391	2021-12-01	2020-07-18	3.0	3.32	—	3.4	0.009	1.18	9.0	0.09	17.39	0.01	1.896	17.96	11.04	8.0	91.9	0.2	-2.89	0.45	0.60	2.22	3.3	0.004	0.79	0.0	0.05	17.24	0.01	2.133	13.95	6.57	4.4	95.6	0.0	0.60	1.85	0.54	0.73	1.72	4094	597	3	0	1	0	0	logfile
✔	6M49	30074	2021-12-01	2020-03-06	3.7	4.45	—	4.4	0.008	0.85	0.0	0.05	14.32	0.01	2.079	14.80	0.98	7.1	92.6	0.2	-4.00	0.46	0.70	1.15	4.4	0.003	0.84	0.0	0.04	16.65	0.00	2.231	9.43	0.66	3.2	96.8	0.0	1.83	3.60	0.48	0.73	1.18	3098	420	3	0	1	0	0	logfile
✔	7D7M	30608	2021-12-01	2020-10-05	3.3	2.94	3.16	3.3	0.006	0.77	0.0	0.16	14.40	0.00	2.208	9.93	0.00	1.3	98.7	0.0	0.14	0.64	0.74	2.13	3.3	0.004	0.67	0.0	0.04	15.25	0.01	2.191	8.50	0.29	2.0	98.0	0.0	0.91	0.53	0.61	0.74	1.51	7326	1031	6	0	1	0	0	logfile
✔	7CKo	30389	2021-12-01	2020-07-18	2.95	3.28	—	3.3	0.012	1.29	10.0	0.13	16.78	0.01	1.964	11.96	12.88	9.1	90.8	0.2	-2.69	0.47	0.62	2.15	3.3	0.005	0.88	0.0	0.05	16.41	0.01	2.177	9.33	5.52	5.5	94.5	0.0	-0.40	2.24	0.49	0.71	2.21	4029	591	3	0	1	0	0	logfile
✔	6YKP	10829	2021-12-02	2020-04-06	2.98	3.28	3.05	3.3	0.014	1.23	0.0	0.07	10.75	0.01	2.350	2.72	0.09	3.0	97.0	0.1	-6.56	0.59	0.85	4.85	3.3	0.003	0.73	0.0	0.04	15.79	0.00	2.229	7.57	1.67	2.4	97.6	0.1	0.93	1.10	0.62	0.86	2.99	10190	1326	9	0	0	7	0	logfile
✔	7KDT	22829	2021-12-01	2020-10-09	3.05	3.34	3.19	3.4	0.012	1.74	0.0	0.09	14.56	0.02	2.562	0.12	0.47	1.4	98.6	0.0	-1.64	0.70	0.77	2.95	3.3	0.002	0.51	0.0	0.03	17.10	0.00	2.221	6.08	0.00	1.8	98.2	0.0	3.06	2.82	0.68	0.79	2.35	8064	505	2	0	0	0	4042	logfile
✔	6X14	21988	2021-12-01	2020-05-18	3.71	3.82	—	3.8	0.008	1.10	0.0	0.05	16.45	0.01	2.282	6.68	0.00	3.2	96.8	0.0	-4.81	0.62	0.83	1.45	3.9	0.007	0.86	0.0	0.04	16.77	0.00	2.188	7.97	0.00	3.0	97.0	0.0	0.10	1.15	0.61	0.83	1.32	9486	1239	6	0	9	0	0	logfile
✔	7K18	22621	2021-12-01	2020-09-07	3.3	3.43	—	3.4	0.006	1.08	1.0	0.05	18.31	0.01	1.936	21.46	3.41	7.9	91.8	0.3	-3.42	0.53	0.72	1.76	3.4	0.004	0.73	0.0	0.04	17.82	0.00	2.071	13.78	0.50	6.8	93.1	0.1	-0.16	0.66	0.53	0.75	1.54	9749	1195	6	0	19	0	0	logfile
✔	6ZXA	11516	2021-12-01	2020-07-29	2.38	2.34	—	2.3	0.019	3.63	0.0	0.07	20.59	0.01	2.324	10.63	5.21	12.8	87.2	0.0	-1.00	0.75	0.90	5.13	2.3	0.018	2.56	0.0	0.06	20.71	0.01	2.154	13.10	2.53	11.5	88.5	0.0	0.83	0.35	0.75	0.88	4.32	8442	791	28	0	35	0	0	logfile
✔	7AHD	11783	2021-12-02	2020-09-24	3.4	3.48	3.35	3.4	0.008	1.10	0.0	0.05	13.49	0.00	2.215	8.86	0.79	3.8	96.2	0.0	-0.17	0.74	0.81	3.06	3.4	0.003	0.59	0.0	0.04	15.44	0.00	2.203	8.91	0.09	1.6	98.4	0.0	0.95	1.16	0.76	0.85	2.61	10562	1361	7	0	3	0	0	logfile
✔	6X15	21989	2021-12-01	2020-05-18	3.05	3.20	—	3.2	0.008	1.25	0.0	0.05	19.04	0.01	2.281	3.63	0.00	3.1	96.9	0.0	-3.80	0.73	0.87	2.90	3.2	0.002	0.53	0.0	0.04	15.28	0.00	2.174	6.17	0.00	2.7	97.3	0.0	1.85	0.44	0.73	0.88	2.48	10026	1260	9	0	51	9	0	logfile
✔	7K2T	22644	2021-12-02	2020-09-09	3.6	3.72	—	3.7	0.005	0.78	0.0	0.04	13.98	0.00	1.955	9.52	0.00	4.4	95.6	0.0	-3.30	0.69	0.84	2.63	3.7	0.004	0.65	0.0	0.04	16.12	0.00	1.877	9.81	0.27	3.9	96.1	0.0	-0.60	0.66	0.69	0.84	1.90	10275	1249	6	0	4	0	0	logfile
✔	7KA2	22756	2021-12-02	2020-09-29	3.6	3.77	—	3.6	0.008	0.96	0.0	0.05	15.20	0.01	2.254	6.36	6.12	3.8	96.2	0.0	-1.99	0.87	0.83	1.20	3.6	0.003	0.70	0.0	0.04	15.79	0.00	2.100	13.58	0.54	2.7	97.3	0.0	1.25	1.25	0.87	0.84	0.66	10472	1372	4	0	0	0	0	logfile

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