The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7MJP | 23881 | 2023-02-21 | 2021-04-20 | 4.2 | 4.40 | — | 4.3 | 0.007 | 1.11 | 0.0 | 0.07 | 7.09 | 0.01 | 1.477 | 2.76 | 0.00 | 9.1 | 90.9 | 0.0 | -1.16 | 0.51 | 0.65 | — | 4.4 | 0.002 | 0.59 | 0.0 | 0.04 | 5.47 | 0.00 | 2.285 | 0.87 | 0.00 | 6.8 | 93.2 | 0.0 | -0.36 | 0.44 | 0.56 | 0.69 | — | 14163 | 2818 | 10 | 0 | 8 | 0 | 0 | logfile |
✔ | 4V19 | 2787 | 2023-02-27 | 2014-09-25 | 3.4 | 3.44 | — | 3.4 | 0.009 | 1.32 | 0.0 | 0.05 | 20.28 | 0.05 | 1.860 | 9.75 | 6.97 | 3.8 | 96.1 | 0.1 | -2.85 | 0.76 | 0.88 | 2.04 | 3.4 | 0.003 | 1.00 | 0.0 | 0.04 | 19.43 | 0.01 | 1.122 | 8.45 | 0.58 | 3.5 | 96.5 | 0.1 | 0.02 | 1.52 | 0.76 | 0.87 | 2.12 | 69409 | 4361 | 42 | 1583 | 171 | 204 | 0 | logfile |
✔ | 6PES | 20331 | 2023-02-17 | 2019-06-20 | 3.6 | 3.82 | — | 4.0 | 0.009 | 0.70 | 0.0 | 0.06 | 12.87 | 0.01 | 2.432 | 11.45 | 0.00 | 12.3 | 87.7 | 0.0 | -1.79 | 0.38 | 0.78 | 1.73 | 4.0 | 0.004 | 0.61 | 0.0 | 0.05 | 14.62 | 0.00 | 2.275 | 9.16 | 0.24 | 7.5 | 92.5 | 0.0 | -2.54 | 0.55 | 0.43 | 0.82 | 2.73 | 4040 | 590 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WTG | 32785 | 2023-02-17 | 2022-02-04 | 3.8 | 3.93 | — | 3.9 | 0.006 | 1.20 | 0.0 | 0.07 | 14.44 | 0.01 | 2.297 | 4.61 | 0.00 | 9.1 | 90.9 | 0.0 | -2.94 | 0.67 | 0.73 | 2.60 | 3.9 | 0.003 | 0.77 | 0.0 | 0.05 | 15.85 | 0.01 | 2.100 | 12.76 | 0.56 | 9.3 | 90.5 | 0.2 | -2.41 | 0.66 | 0.70 | 0.76 | 1.80 | 3318 | 425 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LXB | 23569 | 2023-02-21 | 2021-03-03 | 3.26 | 3.63 | — | 3.7 | 0.009 | 1.43 | 0.0 | 0.05 | 20.27 | 0.01 | 2.203 | 22.95 | 0.58 | 13.9 | 85.5 | 0.6 | -2.03 | 0.76 | 0.73 | 1.37 | 3.7 | 0.003 | 0.76 | 0.0 | 0.05 | 20.60 | 0.00 | 2.111 | 17.36 | 0.30 | 8.8 | 91.1 | 0.1 | -1.19 | 0.49 | 0.77 | 0.74 | 0.82 | 54280 | 6928 | 32 | 8 | 16 | 0 | 0 | logfile |
✔ | 5ZR1 | 6941 | 2023-02-24 | 2018-04-21 | 3.0 | 3.18 | — | 3.1 | 0.007 | 1.04 | 2.0 | 0.06 | 15.46 | 0.01 | 2.050 | 4.08 | 0.65 | 4.3 | 95.7 | 0.0 | -5.16 | 0.77 | 0.84 | 3.94 | 3.1 | 0.005 | 0.65 | 0.0 | 0.04 | 18.51 | 0.00 | 1.851 | 7.81 | 2.34 | 3.8 | 96.2 | 0.0 | -0.31 | 1.59 | 0.75 | 0.86 | 3.09 | 22260 | 2509 | 11 | 82 | 6 | 0 | 0 | logfile |
✔ | 7SQR | 25391 | 2023-02-22 | 2021-11-06 | 3.4 | 4.22 | 3.33 | 3.9 | 0.003 | 0.63 | 0.0 | 0.04 | 13.78 | 0.00 | 2.185 | 6.82 | 0.00 | 3.1 | 96.9 | 0.0 | 1.05 | 0.85 | 0.83 | 2.86 | 3.9 | 0.003 | 0.56 | 0.0 | 0.04 | 15.09 | 0.00 | 2.122 | 7.17 | 0.22 | 4.4 | 95.6 | 0.0 | 0.69 | 0.46 | 0.85 | 0.84 | 3.00 | 17272 | 2216 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6i1X | 0326 | 2023-02-22 | 2018-10-30 | 3.7 | 3.83 | — | 3.8 | 0.013 | 1.81 | 34.0 | 0.10 | 14.94 | 0.01 | 0.458 | 50.06 | 4.35 | 7.5 | 90.6 | 1.9 | -3.51 | 0.50 | 0.32 | 0.28 | 3.8 | 0.003 | 0.77 | 0.0 | 0.05 | 16.37 | 0.00 | 2.134 | 17.07 | 0.28 | 4.8 | 95.0 | 0.2 | -0.88 | 1.06 | 0.65 | 0.60 | 0.83 | 54915 | 7290 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JZ6 | 22530 | 2023-02-23 | 2020-09-01 | 2.53 | 2.20 | — | 2.2 | 0.009 | 1.04 | 8.0 | 0.11 | 19.13 | 0.01 | 1.219 | 8.05 | 11.17 | 7.8 | 92.2 | 0.0 | -3.03 | 0.58 | 0.65 | 2.78 | 2.2 | 0.003 | 0.62 | 0.0 | 0.04 | 19.08 | 0.00 | 2.177 | 5.78 | 5.84 | 2.8 | 97.2 | 0.0 | 0.25 | 1.59 | 0.57 | 0.66 | 2.47 | 20842 | 2646 | 12 | 0 | 4 | 18 | 0 | logfile |
✔ | 6SSX | 10307 | 2023-02-17 | 2019-09-09 | 2.98 | 3.11 | — | 3.1 | 0.008 | 0.94 | 0.0 | 0.07 | 14.94 | 0.00 | 2.424 | 6.14 | 4.26 | 12.6 | 87.4 | 0.0 | -4.73 | 0.65 | 0.82 | 4.81 | 3.0 | 0.008 | 0.80 | 0.0 | 0.06 | 16.95 | 0.00 | 2.222 | 13.38 | 4.47 | 13.2 | 86.8 | 0.0 | -5.14 | 0.77 | 0.65 | 0.86 | 4.75 | 4900 | 730 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Wo0 | 32637 | 2023-02-20 | 2022-01-20 | 2.7 | 2.93 | 2.56 | 2.9 | 0.007 | 0.91 | 0.0 | 0.06 | 15.45 | 0.01 | 2.538 | 5.18 | 0.00 | 3.2 | 96.8 | 0.0 | -3.84 | 0.55 | 0.81 | 5.89 | 2.9 | 0.003 | 0.53 | 0.0 | 0.05 | 16.81 | 0.00 | 2.366 | 4.02 | 0.30 | 2.6 | 97.4 | 0.0 | -2.18 | 0.66 | 0.54 | 0.85 | 5.28 | 12964 | 910 | 14 | 0 | 0 | 0 | 6622 | logfile |
✔ | 6PDT | 20309 | 2023-02-27 | 2019-06-19 | 3.8 | 3.95 | — | 3.9 | 0.022 | 2.06 | 0.0 | 0.21 | 11.05 | 0.01 | 1.771 | 0.92 | 0.00 | 1.9 | 97.7 | 0.4 | 0.40 | 0.73 | 0.73 | 1.74 | 3.9 | 0.003 | 0.94 | 0.0 | 0.04 | 14.66 | 0.00 | 1.789 | 10.46 | 0.17 | 5.8 | 94.2 | 0.1 | 0.67 | 2.29 | 0.76 | 0.78 | 1.40 | 31364 | 2000 | 8 | 0 | 12 | 0 | 15636 | logfile |
✔ | 7EJE | 31160 | 2023-02-18 | 2021-04-02 | 3.98 | 4.18 | — | 4.0 | 0.009 | 1.30 | 0.0 | 0.05 | 15.13 | 0.00 | 1.454 | 41.99 | 4.44 | 4.9 | 92.8 | 2.3 | -2.37 | 0.58 | 0.73 | 1.42 | 4.0 | 0.003 | 0.76 | 0.0 | 0.04 | 18.40 | 0.00 | 1.958 | 16.31 | 0.40 | 4.0 | 95.0 | 1.0 | 0.33 | 4.28 | 0.63 | 0.84 | 1.58 | 7602 | 933 | 8 | 18 | 6 | 0 | 0 | logfile |
✔ | 7D43 | 30568 | 2023-02-27 | 2020-09-22 | 4.3 | 4.40 | — | 4.3 | 0.006 | 0.99 | 0.0 | 0.05 | 14.62 | 0.01 | 2.018 | 28.45 | 0.31 | 18.3 | 81.6 | 0.1 | -6.11 | 0.83 | 0.79 | — | 4.3 | 0.005 | 0.79 | 0.0 | 0.05 | 13.78 | 0.00 | 2.083 | 20.44 | 0.00 | 12.6 | 87.3 | 0.0 | -2.75 | 1.57 | 0.83 | 0.78 | — | 31009 | 4347 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MiU | 23865 | 2023-02-22 | 2021-04-17 | 2.6 | 2.58 | — | 2.6 | 0.015 | 2.02 | 4.0 | 0.12 | 14.40 | 0.01 | 1.966 | 4.76 | 2.22 | 4.3 | 95.1 | 0.7 | -1.19 | 0.64 | 0.79 | 4.31 | 2.6 | 0.003 | 0.63 | 0.0 | 0.04 | 17.59 | 0.00 | 2.063 | 8.61 | 1.37 | 1.8 | 98.2 | 0.0 | 0.31 | 1.25 | 0.67 | 0.84 | 2.90 | 17412 | 2172 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 6VBW | 21146 | 2023-02-26 | 2019-12-19 | 3.2 | 3.31 | — | 3.3 | 0.011 | 1.19 | 2.0 | 0.07 | 14.36 | 0.01 | 2.057 | 12.06 | 1.96 | 8.5 | 91.4 | 0.1 | -4.69 | 0.75 | 0.79 | 3.46 | 3.3 | 0.003 | 0.63 | 0.0 | 0.04 | 16.75 | 0.00 | 2.133 | 9.76 | 0.37 | 6.4 | 93.5 | 0.0 | -1.58 | 1.31 | 0.79 | 0.85 | 2.45 | 29087 | 3343 | 15 | 107 | 4 | 0 | 0 | logfile |
✔ | 6F2D | 4173 | 2023-02-20 | 2017-11-24 | 4.2 | 4.27 | 4.05 | 4.1 | 0.010 | 1.19 | 0.0 | 0.05 | 9.30 | 0.01 | 2.023 | 26.29 | 0.51 | 16.3 | 83.0 | 0.7 | -6.32 | 0.71 | 0.72 | — | 4.1 | 0.003 | 0.89 | 0.0 | 0.04 | 12.97 | 0.01 | 2.156 | 12.99 | 0.00 | 7.5 | 91.9 | 0.6 | 0.19 | 2.03 | 0.75 | 0.77 | — | 12541 | 1629 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Y5A | 33614 | 2023-02-24 | 2022-06-16 | 3.5 | 4.25 | 3.40 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 14.47 | 0.00 | 1.986 | 6.54 | 0.04 | 2.7 | 97.3 | 0.0 | 0.45 | 0.90 | 0.85 | 1.38 | 3.6 | 0.002 | 0.54 | 0.0 | 0.04 | 15.88 | 0.00 | 1.944 | 7.00 | 0.16 | 2.6 | 97.4 | 0.0 | 0.64 | 0.29 | 0.90 | 0.85 | 1.23 | 23975 | 3164 | 12 | 0 | 10 | 0 | 0 | logfile |
✔ | 7M62 | 23687 | 2023-02-16 | 2021-03-25 | 3.9 | 3.91 | — | 4.3 | 0.007 | 1.13 | 0.0 | 0.07 | 14.83 | 0.00 | 2.321 | 32.83 | 0.00 | 23.3 | 76.7 | 0.0 | -4.97 | 0.55 | 0.62 | 2.27 | 4.2 | 0.006 | 1.03 | 0.0 | 0.06 | 15.73 | 0.00 | 2.059 | 31.10 | 2.22 | 26.0 | 74.0 | 0.0 | -4.94 | 2.76 | 0.57 | 0.68 | 2.84 | 2380 | 320 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 6N3B | 9350 | 2023-02-17 | 2018-11-14 | 3.8 | 3.75 | — | 4.0 | 0.010 | 1.21 | 0.0 | 0.05 | 11.40 | 0.01 | 2.253 | 20.70 | 0.00 | 13.7 | 86.3 | 0.0 | -5.17 | 0.41 | 0.71 | 2.90 | 4.0 | 0.004 | 0.84 | 0.0 | 0.04 | 16.35 | 0.01 | 2.292 | 25.40 | 1.13 | 9.6 | 90.4 | 0.0 | -5.16 | 1.50 | 0.42 | 0.70 | 1.16 | 2735 | 385 | 10 | 0 | 0 | 0 | 0 | logfile |