The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6M1H | 30047 | 2023-08-11 | 2020-02-26 | 3.6 | 3.71 | — | 3.6 | 0.007 | 0.96 | 0.0 | 0.06 | 15.34 | 0.01 | 1.782 | 9.47 | 0.21 | 6.1 | 93.9 | 0.0 | -4.70 | 0.82 | 0.79 | 1.90 | 3.6 | 0.003 | 0.70 | 0.0 | 0.04 | 16.54 | 0.00 | 2.159 | 12.89 | 0.21 | 4.4 | 95.6 | 0.0 | -1.46 | 1.68 | 0.81 | 0.78 | 1.02 | 9036 | 1139 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CZ6 | 30507 | 2023-08-09 | 2020-09-07 | 4.1 | 4.04 | — | 4.1 | 0.009 | 1.62 | 0.0 | 0.05 | 8.57 | 0.01 | 1.047 | 61.25 | 0.00 | 8.1 | 91.9 | 0.0 | -1.66 | 0.68 | 0.64 | — | 4.1 | 0.004 | 0.84 | 0.0 | 0.05 | 11.13 | 0.01 | 2.108 | 15.25 | 0.00 | 5.5 | 94.5 | 0.0 | -2.13 | 0.91 | 0.65 | 0.72 | — | 4535 | 630 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YoZ | 33991 | 2023-08-11 | 2022-08-02 | 4.3 | 4.57 | 4.38 | 4.3 | 0.003 | 0.55 | 0.0 | 0.03 | 27.62 | 0.00 | 2.269 | 6.78 | 0.00 | 1.4 | 98.6 | 0.0 | 0.64 | 0.85 | 0.72 | — | 4.3 | 0.004 | 0.74 | 0.0 | 0.04 | 29.71 | 0.01 | 2.196 | 19.72 | 0.00 | 1.9 | 98.1 | 0.0 | 0.22 | 1.82 | 0.89 | 0.83 | — | 9752 | 594 | 10 | 242 | 0 | 0 | 0 | logfile |
✔ | 7JHY | 22340 | 2023-08-14 | 2020-07-21 | 3.9 | 3.99 | — | 4.0 | 0.005 | 1.14 | 0.0 | 0.06 | 16.51 | 0.01 | 2.185 | 4.92 | 0.00 | 14.8 | 85.0 | 0.2 | -2.88 | 0.53 | 0.68 | 1.32 | 4.0 | 0.003 | 0.82 | 0.0 | 0.04 | 17.99 | 0.01 | 2.162 | 12.58 | 0.54 | 14.6 | 85.4 | 0.0 | -2.07 | 2.02 | 0.55 | 0.71 | 0.82 | 16597 | 2083 | 12 | 31 | 0 | 0 | 0 | logfile |
✔ | 6QK7 | 4571 | 2023-08-16 | 2019-01-28 | 3.3 | 3.70 | 3.35 | 3.4 | 0.004 | 0.75 | 0.0 | 0.06 | 10.67 | 0.01 | 1.993 | 6.24 | 0.44 | 9.2 | 90.8 | 0.0 | -4.70 | 0.86 | 0.82 | 2.57 | 3.4 | 0.002 | 0.64 | 0.0 | 0.04 | 13.28 | 0.00 | 2.138 | 7.84 | 0.22 | 6.7 | 93.3 | 0.0 | -1.45 | 2.78 | 0.87 | 0.87 | 1.84 | 20790 | 2592 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 7RWJ | 24717 | 2023-08-11 | 2021-08-20 | 3.5 | 3.71 | — | 3.7 | 0.008 | 1.17 | 4.0 | 0.07 | 14.92 | 0.01 | 2.258 | 9.32 | 1.35 | 5.1 | 94.6 | 0.3 | -3.76 | 0.78 | 0.80 | 2.26 | 3.7 | 0.003 | 0.61 | 0.0 | 0.04 | 15.68 | 0.00 | 2.169 | 6.84 | 0.29 | 4.8 | 95.0 | 0.2 | 0.74 | 0.47 | 0.78 | 0.80 | 1.93 | 9906 | 1212 | 4 | 0 | 8 | 0 | 0 | logfile |
✔ | 5MZ6 | 3583 | 2023-08-10 | 2017-01-31 | 3.8 | 3.83 | — | 3.8 | 0.005 | 1.05 | 0.0 | 0.05 | 11.57 | 0.01 | 2.269 | 8.71 | 0.70 | 5.2 | 94.8 | 0.0 | -5.37 | 0.65 | 0.71 | 2.07 | 3.8 | 0.003 | 0.77 | 0.0 | 0.04 | 15.97 | 0.00 | 2.095 | 15.48 | 0.58 | 3.3 | 96.7 | 0.0 | -0.23 | 0.83 | 0.74 | 0.77 | 0.95 | 8401 | 1092 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VEB | 31945 | 2023-08-23 | 2021-09-08 | 4.2 | 4.27 | — | 4.2 | 0.011 | 1.37 | 0.0 | 0.05 | 13.69 | 0.00 | 2.165 | 8.06 | 0.74 | 2.6 | 97.4 | 0.0 | 0.70 | 0.82 | 0.85 | — | 4.2 | 0.003 | 0.81 | 0.0 | 0.04 | 15.03 | 0.00 | 2.071 | 17.24 | 0.03 | 2.7 | 97.3 | 0.1 | 0.85 | 2.12 | 0.80 | 0.81 | — | 35530 | 4537 | 51 | 0 | 36 | 0 | 0 | logfile |
✔ | 6WVL | 21922 | 2023-08-19 | 2020-05-06 | 3.2 | 3.69 | 3.05 | 3.8 | 0.013 | 1.98 | 5.0 | 0.10 | 16.20 | 0.02 | 1.944 | 0.63 | 0.41 | 1.8 | 98.2 | 0.0 | -1.96 | 0.44 | 0.48 | 0.43 | 3.6 | 0.004 | 0.67 | 0.0 | 0.04 | 17.33 | 0.00 | 1.796 | 12.42 | 0.41 | 3.4 | 96.6 | 0.0 | -0.06 | 2.50 | 0.49 | 0.74 | 2.41 | 26744 | 1712 | 8 | 2 | 6 | 0 | 13046 | logfile |
✔ | 6J5V | 0682 | 2023-08-11 | 2019-01-12 | 4.25 | 4.42 | — | 4.3 | 0.009 | 1.18 | 0.0 | 0.07 | 16.24 | 0.01 | 2.263 | 10.12 | 0.94 | 14.2 | 85.8 | 0.0 | -4.88 | 0.83 | 0.81 | — | 4.3 | 0.003 | 0.82 | 0.0 | 0.05 | 14.36 | 0.00 | 2.118 | 16.43 | 0.00 | 11.8 | 88.2 | 0.0 | -2.76 | 0.67 | 0.82 | 0.79 | — | 10529 | 1315 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7EVW | 31340 | 2023-08-10 | 2021-05-23 | 3.22 | 2.90 | — | 3.2 | 0.004 | 0.76 | 0.0 | 0.05 | 15.55 | 0.01 | 2.207 | 7.34 | 0.00 | 4.7 | 95.3 | 0.0 | -0.98 | 0.60 | 0.72 | 2.23 | 3.2 | 0.004 | 0.71 | 0.0 | 0.04 | 17.42 | 0.00 | 2.042 | 13.05 | 0.65 | 4.7 | 95.3 | 0.0 | 0.29 | 2.43 | 0.59 | 0.74 | 2.14 | 8672 | 1094 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZZ2 | 15032 | 2023-08-09 | 2022-05-25 | 2.48 | 2.80 | 2.37 | 2.1 | 0.005 | 0.76 | 0.0 | 0.05 | 17.25 | 0.01 | 2.132 | 4.21 | 3.27 | 2.2 | 97.8 | 0.0 | -0.30 | 0.90 | 0.89 | 3.91 | 2.2 | 0.004 | 0.53 | 0.0 | 0.04 | 17.30 | 0.00 | 2.024 | 6.31 | 3.05 | 1.9 | 98.1 | 0.0 | 1.11 | 0.23 | 0.90 | 0.90 | 3.84 | 4366 | 541 | 1 | 0 | 3 | 57 | 0 | logfile |
✔ | 6KUV | 9888 | 2023-08-13 | 2019-09-02 | 4.1 | 4.13 | — | 4.1 | 0.003 | 0.79 | 0.0 | 0.05 | 10.91 | 0.01 | 2.206 | 6.18 | 0.28 | 7.4 | 92.5 | 0.2 | -4.84 | 0.69 | 0.72 | — | 4.1 | 0.003 | 0.74 | 0.0 | 0.04 | 14.40 | 0.00 | 2.132 | 10.92 | 0.14 | 7.2 | 92.8 | 0.1 | -1.10 | 2.92 | 0.73 | 0.76 | — | 13720 | 1640 | 5 | 23 | 0 | 0 | 0 | logfile |
✔ | 6TYi | 20583 | 2023-08-11 | 2019-08-09 | 3.3 | 3.55 | — | 3.5 | 0.012 | 1.03 | 0.0 | 0.05 | 15.89 | 0.00 | 1.796 | 11.31 | 0.43 | 4.8 | 95.1 | 0.1 | -0.84 | 0.70 | 0.81 | 1.90 | 3.5 | 0.003 | 0.54 | 0.0 | 0.03 | 17.18 | 0.00 | 2.214 | 6.38 | 0.32 | 2.6 | 97.4 | 0.0 | 3.07 | 1.18 | 0.61 | 0.77 | 1.34 | 9184 | 1186 | 11 | 0 | 4 | 0 | 0 | logfile |
✔ | 6WVM | 21923 | 2023-08-19 | 2020-05-06 | 3.3 | 3.76 | 3.18 | 3.8 | 0.013 | 1.96 | 6.0 | 0.10 | 16.19 | 0.02 | 1.972 | 0.67 | 0.55 | 1.9 | 98.1 | 0.0 | -1.87 | 0.45 | 0.49 | 0.62 | 3.6 | 0.003 | 0.67 | 0.0 | 0.04 | 17.24 | 0.00 | 1.730 | 11.49 | 0.55 | 2.9 | 97.1 | 0.0 | 0.10 | 2.54 | 0.54 | 0.78 | 2.44 | 26744 | 1712 | 8 | 2 | 6 | 0 | 13046 | logfile |
✔ | 7R6N | 24283 | 2023-08-10 | 2021-06-22 | 4.1 | 3.51 | — | 3.7 | 0.006 | 0.96 | 0.0 | 0.04 | 17.22 | 0.01 | 2.036 | 3.68 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.56 | 0.75 | — | 3.7 | 0.007 | 0.84 | 0.0 | 0.04 | 17.84 | 0.01 | 1.759 | 18.86 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.27 | 0.59 | 0.76 | — | 7588 | 0 | 1 | 354 | 12 | 0 | 0 | logfile |
✔ | 6TYS | 20584 | 2023-08-14 | 2019-08-09 | 3.5 | 3.77 | — | 3.7 | 0.021 | 1.95 | 6.0 | 0.11 | 11.19 | 0.01 | 2.321 | 0.84 | 0.17 | 2.0 | 98.0 | 0.0 | 0.77 | 0.79 | 0.85 | 2.59 | 3.7 | 0.004 | 0.69 | 0.0 | 0.05 | 14.83 | 0.00 | 2.200 | 6.43 | 0.57 | 3.6 | 96.4 | 0.0 | 0.78 | 2.07 | 0.77 | 0.85 | 2.40 | 16059 | 2022 | 24 | 0 | 39 | 0 | 0 | logfile |
✔ | 6WKT | 21708 | 2023-08-09 | 2020-04-16 | 3.4 | 3.21 | 3.09 | 3.3 | 0.004 | 0.81 | 0.0 | 0.05 | 13.97 | 0.01 | 2.329 | 0.00 | 0.00 | 1.9 | 98.1 | 0.0 | -3.42 | 0.65 | 0.75 | 3.69 | 3.3 | 0.003 | 0.57 | 0.0 | 0.03 | 16.11 | 0.00 | 2.212 | 10.95 | 0.00 | 4.8 | 95.2 | 0.0 | 3.85 | 1.35 | 0.64 | 0.76 | 3.76 | 3152 | 424 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 5ZAL | 6905 | 2023-08-12 | 2018-02-07 | 4.7 | 4.44 | — | 3.8 | 0.008 | 1.44 | 1.0 | 0.07 | 12.67 | 0.01 | 2.215 | 19.06 | 0.97 | 16.1 | 83.2 | 0.7 | -5.19 | 0.87 | 0.74 | — | 3.8 | 0.005 | 0.95 | 0.0 | 0.05 | 13.33 | 0.01 | 2.089 | 38.66 | 0.00 | 16.3 | 83.5 | 0.2 | -3.24 | 1.62 | 0.84 | 0.60 | — | 12346 | 1389 | 3 | 58 | 0 | 0 | 0 | logfile |
✔ | 6XoW | 22282 | 2023-08-10 | 2020-07-07 | 4.6 | 8.17 | 4.40 | 7.0 | 0.006 | 1.00 | 0.0 | 0.05 | 13.39 | 0.01 | 1.991 | 24.14 | 0.23 | 4.2 | 95.8 | 0.0 | -0.98 | 0.87 | 0.72 | — | 7.0 | 0.003 | 0.72 | 0.0 | 0.04 | 13.41 | 0.00 | 2.180 | 17.36 | 0.23 | 3.1 | 96.9 | 0.0 | 0.65 | 0.79 | 0.91 | 0.81 | — | 7711 | 966 | 1 | 0 | 0 | 0 | 0 | logfile |