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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8FVG | 29486 | 2024-03-25 | 2023-01-18 | 3.1 | 2.34 | 3.16 | 3.2 | 0.004 | 0.66 | 0.0 | 0.05 | 14.20 | 0.00 | 2.106 | 8.55 | 0.00 | 5.7 | 94.3 | 0.0 | -0.63 | 0.26 | 0.75 | 2.01 | 3.1 | 0.019 | 0.86 | 0.0 | 0.05 | 16.32 | 0.01 | 2.109 | 8.32 | 3.97 | 7.5 | 92.5 | 0.0 | -0.66 | 1.36 | 0.26 | 0.78 | 2.16 | 48009 | 6409 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 5L08 | 8300 | 2024-03-16 | 2016-07-26 | 4.6 | 3.95 | — | 4.3 | 0.011 | 1.03 | 0.0 | 0.05 | 11.66 | 0.00 | 2.041 | 6.99 | 0.00 | 3.0 | 96.8 | 0.2 | -0.41 | 0.34 | 0.71 | — | 4.3 | 0.005 | 1.12 | 0.0 | 0.05 | 14.44 | 0.01 | 1.786 | 38.60 | 0.00 | 7.3 | 92.7 | 0.0 | -2.22 | 3.33 | 0.27 | 0.73 | — | 13617 | 1629 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 6FLQ | 4275 | 2024-03-21 | 2018-01-26 | 3.6 | 3.93 | 3.76 | 40.0 | 0.016 | 1.33 | 0.0 | 0.07 | 15.27 | 0.01 | 1.897 | 5.97 | 1.40 | 10.8 | 89.1 | 0.1 | -4.32 | 0.16 | 0.02 | 0.21 | 3.7 | 0.006 | 1.01 | 1.0 | 0.05 | 17.68 | 0.01 | 1.917 | 21.67 | 3.97 | 11.5 | 88.4 | 0.1 | -1.93 | 2.09 | 0.27 | 0.21 | -0.04 | 30201 | 3868 | 10 | 91 | 3 | 0 | 0 | logfile |
✔ | 6REU | 4857 | 2024-03-22 | 2019-04-12 | 4.2 | 4.32 | 4.74 | 30.0 | 0.006 | 0.99 | 0.0 | 0.06 | 15.16 | 0.01 | 1.681 | 9.40 | 0.42 | 5.7 | 94.1 | 0.1 | -4.88 | 0.21 | 0.03 | — | 30.0 | 0.005 | 0.95 | 0.0 | 0.05 | 14.27 | 0.01 | 1.794 | 25.43 | 0.03 | 7.4 | 92.5 | 0.1 | -2.18 | 1.53 | 0.27 | 0.20 | — | 33899 | 4503 | 25 | 0 | 10 | 0 | 0 | logfile |
✔ | 6VHL | 21207 | 2024-03-10 | 2020-01-10 | 3.3 | 3.60 | — | 3.5 | 0.007 | 1.03 | 0.0 | 0.07 | 15.85 | 0.01 | 1.791 | 14.51 | 4.48 | 14.7 | 85.3 | 0.0 | -6.30 | 0.26 | 0.70 | 3.54 | 3.6 | 0.003 | 0.71 | 0.0 | 0.04 | 16.46 | 0.00 | 2.331 | 5.80 | 2.99 | 6.7 | 93.3 | 0.0 | -3.62 | 2.72 | 0.27 | 0.70 | 3.42 | 1190 | 158 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oG6 | 12879 | 2024-03-10 | 2021-05-06 | 3.3 | 3.47 | — | 2.9 | 0.008 | 0.82 | 0.0 | 0.04 | 18.38 | 0.01 | 2.325 | 7.36 | 6.10 | 9.6 | 90.4 | 0.0 | -4.47 | 0.28 | 0.82 | 2.77 | 2.9 | 0.003 | 0.62 | 0.0 | 0.04 | 17.37 | 0.00 | 2.176 | 10.24 | 2.44 | 6.6 | 93.4 | 0.0 | -0.62 | 0.54 | 0.27 | 0.84 | 2.90 | 1602 | 199 | 2 | 5 | 0 | 0 | 0 | logfile |
✔ | 7U15 | 26278 | 2024-03-11 | 2022-02-19 | 3.0 | 3.14 | — | 3.3 | 0.006 | 1.22 | 0.0 | 0.12 | 17.23 | 0.01 | 1.886 | 12.16 | 3.44 | 3.8 | 96.2 | 0.0 | -6.51 | 0.26 | 0.64 | 1.55 | 3.2 | 0.003 | 0.75 | 0.0 | 0.11 | 15.95 | 0.00 | 1.960 | 11.72 | 4.50 | 18.0 | 82.0 | 0.0 | -5.23 | 1.45 | 0.27 | 0.70 | 3.20 | 6684 | 405 | 6 | 0 | 12 | 0 | 3255 | logfile |
✔ | 6Q97 | 4476 | 2024-03-03 | 2018-12-17 | 3.9 | 3.69 | — | 20.0 | 0.011 | 1.20 | 0.0 | 0.16 | 24.87 | 0.02 | 1.320 | 6.99 | 0.38 | 10.1 | 89.8 | 0.1 | -5.34 | 0.15 | 0.01 | 0.22 | 3.6 | 0.005 | 0.92 | 1.0 | 0.05 | 25.72 | 0.01 | 0.951 | 21.35 | 3.55 | 10.5 | 89.5 | 0.0 | -3.27 | 2.51 | 0.27 | 0.22 | 0.31 | 156609 | 6124 | 72 | 5051 | 441 | 2 | 0 | logfile |
✔ | 6X0U | 21984 | 2024-03-10 | 2020-05-17 | 3.6 | 3.62 | — | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 14.50 | 0.00 | 2.277 | 5.74 | 0.00 | 3.7 | 96.1 | 0.3 | -5.79 | 0.26 | 0.78 | 1.89 | 3.6 | 0.002 | 0.66 | 0.0 | 0.03 | 17.85 | 0.00 | 2.198 | 6.54 | 2.34 | 3.2 | 96.8 | 0.0 | 1.40 | 0.77 | 0.27 | 0.78 | 2.51 | 3091 | 398 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UiU | 26553 | 2024-03-10 | 2022-03-29 | 2.8 | 3.11 | 2.72 | 3.1 | 0.004 | 0.62 | 0.0 | 0.04 | 13.60 | 0.00 | 2.356 | 3.35 | 0.00 | 4.8 | 95.2 | 0.0 | -2.09 | 0.28 | 0.82 | 1.99 | 3.3 | 0.004 | 0.96 | 0.0 | 0.04 | 16.77 | 0.00 | 2.227 | 11.74 | 3.33 | 6.0 | 94.0 | 0.0 | -2.10 | 1.37 | 0.28 | 0.89 | 2.72 | 607 | 85 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5MPD | 3534 | 2024-03-24 | 2016-12-16 | 4.1 | 4.14 | — | 4.1 | 0.035 | 3.40 | 330.0 | 0.20 | 17.76 | 0.03 | 0.656 | 3.82 | 2.78 | 5.6 | 92.3 | 2.1 | -2.14 | 0.21 | 0.37 | — | 4.1 | 0.004 | 0.84 | 0.0 | 0.04 | 15.47 | 0.00 | 2.060 | 18.49 | 0.02 | 6.2 | 93.6 | 0.2 | -0.95 | 1.33 | 0.28 | 0.61 | — | 40974 | 5142 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 6M99 | 9050 | 2024-03-20 | 2018-08-23 | 3.4 | 3.37 | — | 3.3 | 0.007 | 0.97 | 0.0 | 0.06 | 10.05 | 0.01 | 2.186 | 6.88 | 0.38 | 5.8 | 94.2 | 0.0 | -4.38 | 0.27 | 0.85 | 3.06 | 3.3 | 0.004 | 0.73 | 0.0 | 0.05 | 15.04 | 0.00 | 2.019 | 13.36 | 4.59 | 5.4 | 94.6 | 0.0 | -0.44 | 0.69 | 0.28 | 0.87 | 2.44 | 101389 | 13152 | 14 | 0 | 2 | 0 | 0 | logfile |
✔ | 8UPT | 42455 | 2024-03-10 | 2023-10-23 | 2.8 | 3.38 | 2.84 | 2.9 | 0.016 | 2.20 | 0.0 | 0.16 | 30.45 | 0.01 | 1.072 | 99.56 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.23 | 0.59 | — | 2.9 | 0.005 | 0.73 | 0.0 | 0.04 | 27.91 | 0.01 | 2.113 | 22.27 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.95 | 0.28 | 0.87 | — | 1518 | 0 | 1 | 71 | 0 | 0 | 0 | logfile |
✔ | 8P34 | 17383 | 2024-03-10 | 2023-05-17 | 2.61 | 2.80 | 2.24 | 2.8 | 0.009 | 1.32 | 0.0 | 0.08 | 11.05 | 0.01 | 2.651 | 0.69 | 0.00 | 5.4 | 94.6 | 0.0 | -1.84 | 0.29 | 0.90 | 7.34 | 2.8 | 0.003 | 0.53 | 0.0 | 0.05 | 13.66 | 0.00 | 2.674 | 0.69 | 1.23 | 4.3 | 95.7 | 0.0 | -1.62 | 0.28 | 0.28 | 0.88 | 6.38 | 711 | 94 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HRE | 0259 | 2024-03-10 | 2018-09-26 | 3.2 | 2.74 | 2.87 | 3.3 | 0.019 | 1.47 | 0.0 | 0.11 | 13.34 | 0.01 | 2.474 | 6.01 | 0.00 | 12.0 | 88.0 | 0.0 | -4.17 | 0.32 | 0.80 | 4.40 | 3.2 | 0.003 | 0.75 | 0.0 | 0.05 | 17.11 | 0.00 | 2.256 | 6.43 | 3.23 | 5.1 | 94.9 | 0.0 | -3.22 | 0.76 | 0.28 | 0.77 | 3.85 | 3522 | 462 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7U10 | 26273 | 2024-03-10 | 2022-02-19 | 3.0 | 3.45 | — | 4.3 | 0.004 | 0.64 | 0.0 | 0.05 | 17.22 | 0.00 | 2.230 | 10.70 | 0.00 | 6.8 | 93.2 | 0.0 | -2.82 | 0.37 | 0.64 | 3.73 | 4.2 | 0.003 | 0.75 | 0.0 | 0.06 | 18.60 | 0.00 | 2.188 | 12.01 | 2.65 | 5.8 | 94.2 | 0.0 | -3.66 | 2.73 | 0.28 | 0.68 | 3.37 | 3429 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 8GZ9 | 34393 | 2024-03-10 | 2022-09-26 | 2.62 | 2.44 | 2.40 | 2.4 | 0.003 | 0.69 | 0.0 | 0.06 | 14.01 | 0.00 | 2.670 | 1.93 | 0.00 | 0.3 | 99.7 | 0.0 | -0.15 | 0.28 | 0.90 | 7.26 | 2.4 | 0.002 | 0.53 | 0.0 | 0.06 | 14.22 | 0.00 | 2.674 | 1.16 | 3.10 | 0.6 | 99.4 | 0.0 | -0.04 | 0.26 | 0.28 | 0.91 | 7.99 | 2426 | 390 | 58 | 0 | 0 | 24 | 0 | logfile |
✔ | 7ABK | 11698 | 2024-03-10 | 2020-09-07 | 3.6 | 4.10 | 3.49 | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 16.30 | 0.00 | 2.315 | 5.67 | 1.23 | 1.5 | 98.5 | 0.0 | 0.91 | 0.28 | 0.87 | 1.10 | 3.9 | 0.003 | 0.61 | 0.0 | 0.03 | 19.21 | 0.00 | 2.250 | 5.35 | 3.70 | 2.1 | 97.9 | 0.0 | 5.10 | 1.54 | 0.28 | 0.86 | 1.35 | 1574 | 196 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8RB7 | 19027 | 2024-03-10 | 2023-12-03 | 3.2 | 3.80 | 3.05 | 3.8 | 0.014 | 1.83 | 0.0 | 0.10 | 14.96 | 0.02 | 2.398 | 0.86 | 0.96 | 4.2 | 95.8 | 0.0 | -1.02 | 0.28 | 0.71 | 1.70 | 3.8 | 0.003 | 0.56 | 0.0 | 0.03 | 17.84 | 0.01 | 2.007 | 8.72 | 0.96 | 2.5 | 97.5 | 0.0 | 2.16 | 2.08 | 0.28 | 0.76 | 1.47 | 5848 | 360 | 2 | 0 | 0 | 0 | 2948 | logfile |
✔ | 8oLG | 16957 | 2024-03-10 | 2023-03-30 | 4.2 | 3.16 | 3.54 | 4.2 | 0.002 | 0.41 | 0.0 | 0.05 | 9.55 | 0.00 | 2.261 | 9.57 | 0.00 | 13.5 | 86.5 | 0.0 | -4.82 | 0.25 | 0.63 | — | 4.2 | 0.004 | 0.80 | 0.0 | 0.05 | 15.39 | 0.00 | 2.337 | 19.49 | 0.00 | 19.5 | 80.5 | 0.0 | -4.20 | 1.59 | 0.29 | 0.65 | — | 1490 | 195 | 5 | 0 | 0 | 0 | 0 | logfile |