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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 4V1A | 2787 | 2022-12-16 | 2014-09-25 | 3.4 | 3.43 | — | 3.4 | 0.009 | 1.29 | 0.0 | 0.05 | 13.81 | 0.01 | 2.067 | 12.20 | 6.03 | 4.6 | 95.3 | 0.1 | -2.62 | 0.37 | 0.78 | 1.69 | 3.4 | 0.003 | 0.69 | 0.0 | 0.04 | 16.83 | 0.00 | 2.076 | 10.41 | 0.15 | 4.3 | 95.6 | 0.1 | 0.54 | 1.91 | 0.38 | 0.78 | 1.67 | 31917 | 3843 | 24 | 0 | 94 | 0 | 0 | logfile |
✔ | 7X84 | 33055 | 2022-12-11 | 2022-03-11 | 3.0 | 3.07 | 2.65 | 3.2 | 0.008 | 0.83 | 0.0 | 0.06 | 13.87 | 0.00 | 2.259 | 11.21 | 0.00 | 10.3 | 89.7 | 0.0 | -5.69 | 0.40 | 0.84 | 3.98 | 3.2 | 0.004 | 0.82 | 0.0 | 0.05 | 17.63 | 0.00 | 2.117 | 11.37 | 2.91 | 7.0 | 93.0 | 0.0 | -3.58 | 2.64 | 0.38 | 0.84 | 3.18 | 3258 | 405 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CU7 | 7618 | 2022-12-11 | 2018-03-23 | 3.5 | 3.63 | — | 4.3 | 0.007 | 0.99 | 0.0 | 0.07 | 9.61 | 0.00 | 2.346 | 4.58 | 2.38 | 15.5 | 84.5 | 0.0 | -4.74 | 0.38 | 0.72 | 2.52 | 4.3 | 0.004 | 0.67 | 0.0 | 0.05 | 14.08 | 0.00 | 2.215 | 17.37 | 0.71 | 13.1 | 86.9 | 0.0 | -4.59 | 1.76 | 0.38 | 0.72 | 1.68 | 4140 | 600 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oGY | 20059 | 2022-12-15 | 2019-04-03 | 3.4 | 3.58 | — | 3.7 | 0.006 | 0.79 | 0.0 | 0.05 | 15.72 | 0.01 | 2.283 | 3.57 | 0.18 | 3.8 | 96.1 | 0.0 | -5.60 | 0.41 | 0.85 | 2.69 | 3.7 | 0.006 | 0.64 | 0.0 | 0.05 | 17.40 | 0.00 | 2.151 | 6.82 | 0.68 | 4.4 | 95.6 | 0.0 | -2.60 | 1.58 | 0.38 | 0.85 | 2.19 | 74364 | 9081 | 13 | 6 | 1 | 0 | 0 | logfile |
✔ | 6QD2 | 4517 | 2022-12-14 | 2018-12-31 | 4.8 | 4.92 | 5.87 | 4.9 | 0.006 | 0.86 | 0.0 | 0.04 | 9.04 | 0.01 | 2.025 | 6.53 | 0.00 | 11.6 | 88.4 | 0.0 | -4.60 | 0.35 | 0.62 | — | 4.9 | 0.003 | 0.67 | 0.0 | 0.04 | 10.89 | 0.00 | 2.082 | 12.37 | 0.00 | 8.9 | 91.1 | 0.0 | -1.23 | 1.11 | 0.39 | 0.65 | — | 21746 | 1420 | 5 | 0 | 2 | 0 | 11100 | logfile |
✔ | 7QKY | 14057 | 2022-12-11 | 2021-12-19 | 1.86 | 2.10 | 1.91 | 2.0 | 0.011 | 1.75 | 3.0 | 0.09 | 12.76 | 0.01 | 2.522 | 1.04 | 0.61 | 4.7 | 95.3 | 0.0 | -3.08 | 0.33 | 0.75 | 8.32 | 2.0 | 0.003 | 0.69 | 0.0 | 0.05 | 16.56 | 0.00 | 2.218 | 4.85 | 0.61 | 6.2 | 93.8 | 0.0 | -3.18 | 1.00 | 0.39 | 0.84 | 7.35 | 5760 | 396 | 6 | 0 | 0 | 0 | 2862 | logfile |
✔ | 7C1D | 30269 | 2022-12-11 | 2020-05-03 | 3.8 | 4.18 | — | 4.3 | 0.004 | 0.71 | 0.0 | 0.05 | 13.99 | 0.00 | 2.367 | 18.87 | 0.00 | 20.4 | 79.6 | 0.0 | -6.46 | 0.34 | 0.74 | 3.47 | 6.5 | 0.004 | 0.69 | 0.0 | 0.05 | 14.90 | 0.00 | 2.239 | 18.63 | 0.52 | 24.5 | 75.5 | 0.0 | -4.57 | 2.82 | 0.39 | 0.75 | 2.42 | 2034 | 306 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 5VZL | 8749 | 2022-12-13 | 2017-05-29 | 3.9 | 4.38 | — | 19.0 | 0.006 | 0.96 | 0.0 | 0.05 | 14.28 | 0.01 | 2.216 | 7.76 | 0.25 | 8.4 | 91.6 | 0.0 | -4.13 | 0.31 | 0.03 | -0.03 | 17.0 | 0.003 | 0.68 | 0.0 | 0.04 | 15.78 | 0.00 | 1.238 | 14.34 | 0.50 | 5.8 | 94.2 | 0.0 | -1.59 | 1.27 | 0.39 | 0.19 | 0.68 | 13915 | 1451 | 3 | 115 | 1 | 0 | 0 | logfile |
✔ | 8BC1 | 15959 | 2022-12-12 | 2022-10-14 | 2.93 | 3.48 | 2.73 | 3.5 | 0.002 | 0.46 | 0.0 | 0.04 | 10.38 | 0.00 | 2.265 | 7.96 | 3.43 | 2.9 | 97.1 | 0.0 | 1.53 | 0.38 | 0.52 | 1.52 | 3.5 | 0.004 | 0.80 | 0.0 | 0.05 | 15.62 | 0.01 | 2.021 | 15.81 | 1.50 | 3.8 | 96.2 | 0.0 | 0.65 | 1.05 | 0.39 | 0.54 | 1.25 | 8684 | 1054 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 7LiV | 23386 | 2022-12-22 | 2021-01-28 | 3.6 | 3.63 | — | 3.6 | 0.009 | 0.95 | 1.0 | 0.05 | 13.49 | 0.01 | 1.080 | 27.01 | 2.97 | 4.9 | 94.5 | 0.6 | -3.03 | 0.24 | 0.49 | 0.16 | 3.6 | 0.005 | 0.85 | 0.0 | 0.05 | 17.32 | 0.01 | 2.038 | 15.21 | 1.12 | 6.1 | 93.9 | 0.1 | -1.34 | 1.79 | 0.39 | 0.82 | 1.44 | 47058 | 5903 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V4C | 31707 | 2022-12-11 | 2021-08-12 | 3.3 | 2.93 | — | 3.4 | 0.008 | 0.75 | 0.0 | 0.06 | 12.47 | 0.00 | 2.305 | 12.50 | 0.00 | 20.0 | 80.0 | 0.0 | -6.54 | 0.40 | 0.83 | 2.37 | 3.4 | 0.003 | 0.61 | 0.0 | 0.05 | 17.76 | 0.00 | 2.159 | 3.79 | 0.76 | 7.8 | 92.2 | 0.0 | -4.65 | 1.18 | 0.39 | 0.82 | 3.35 | 1287 | 186 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QWL | 14188 | 2022-12-11 | 2022-01-25 | 3.47 | 3.11 | 2.99 | 3.5 | 0.012 | 2.27 | 14.0 | 0.13 | 13.78 | 0.01 | 2.501 | 4.15 | 1.06 | 11.3 | 88.2 | 0.5 | -3.35 | 0.45 | 0.81 | 5.36 | 3.4 | 0.007 | 0.84 | 0.0 | 0.05 | 15.70 | 0.00 | 2.069 | 12.44 | 1.06 | 14.3 | 85.7 | 0.0 | -3.21 | 2.77 | 0.39 | 0.82 | 4.61 | 3258 | 405 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CG0 | 30348 | 2022-12-12 | 2020-06-30 | 3.2 | 3.51 | — | 3.5 | 0.003 | 0.53 | 0.0 | 0.04 | 11.23 | 0.00 | 1.992 | 8.37 | 2.56 | 3.0 | 97.0 | 0.0 | 3.52 | 0.37 | 0.79 | 1.26 | 3.5 | 0.003 | 0.70 | 0.0 | 0.04 | 15.87 | 0.00 | 2.077 | 10.72 | 0.79 | 3.0 | 97.0 | 0.0 | 2.99 | 0.86 | 0.39 | 0.83 | 1.16 | 10928 | 1412 | 21 | 0 | 75 | 0 | 0 | logfile |
✔ | 7N5G | 24189 | 2022-12-11 | 2021-06-05 | 2.4 | 2.16 | 2.42 | 1.5 | 0.022 | 1.51 | 0.0 | 0.09 | 10.57 | 0.01 | 2.386 | 0.34 | 0.00 | 0.8 | 99.2 | 0.0 | 1.84 | 0.40 | 0.79 | 3.64 | 1.5 | 0.003 | 0.56 | 0.0 | 0.04 | 16.74 | 0.00 | 2.228 | 4.78 | 2.28 | 1.4 | 98.6 | 0.0 | 2.95 | 1.21 | 0.39 | 0.80 | 2.58 | 2926 | 371 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7DNL | 30787 | 2022-12-14 | 2020-12-09 | 4.19 | 4.89 | — | 4.7 | 0.005 | 1.03 | 0.0 | 0.06 | 14.88 | 0.01 | 1.747 | 6.70 | 0.57 | 7.3 | 92.6 | 0.1 | -4.29 | 0.38 | 0.78 | — | 4.7 | 0.006 | 0.81 | 0.0 | 0.05 | 13.71 | 0.01 | 2.017 | 21.44 | 0.04 | 9.7 | 90.3 | 0.0 | -2.52 | 0.74 | 0.39 | 0.79 | — | 21847 | 2769 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 5ANC | 3147 | 2022-12-21 | 2015-09-06 | 4.2 | 4.23 | — | 4.2 | 0.008 | 1.35 | 7.0 | 0.10 | 19.00 | 0.01 | 1.236 | 6.63 | 4.21 | 13.6 | 82.7 | 3.6 | -4.33 | 0.41 | 0.74 | — | 4.2 | 0.004 | 0.83 | 0.0 | 0.04 | 17.25 | 0.01 | 2.031 | 20.61 | 0.00 | 14.5 | 84.5 | 1.0 | -3.66 | 1.57 | 0.39 | 0.70 | — | 46807 | 2801 | 11 | 1162 | 0 | 0 | 0 | logfile |
✔ | 7RL4 | 24514 | 2022-12-11 | 2021-07-23 | 2.86 | 2.50 | — | 3.1 | 0.015 | 1.16 | 0.0 | 0.07 | 16.04 | 0.01 | 2.535 | 12.04 | 0.00 | 12.5 | 87.5 | 0.0 | -4.62 | 0.39 | 0.82 | 4.55 | 3.0 | 0.012 | 1.00 | 0.0 | 0.05 | 17.03 | 0.01 | 2.258 | 17.96 | 4.75 | 7.8 | 92.2 | 0.0 | -4.76 | 1.13 | 0.39 | 0.84 | 4.87 | 4620 | 680 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QKi | 14043 | 2022-12-11 | 2021-12-17 | 3.13 | 3.29 | 3.04 | 3.2 | 0.011 | 1.99 | 3.0 | 0.10 | 9.18 | 0.01 | 2.508 | 0.99 | 0.00 | 10.1 | 89.9 | 0.0 | -1.50 | 0.41 | 0.79 | 6.28 | 3.3 | 0.004 | 0.63 | 0.0 | 0.05 | 11.99 | 0.00 | 2.081 | 5.38 | 0.00 | 5.2 | 94.8 | 0.0 | -1.91 | 0.77 | 0.39 | 0.81 | 5.46 | 7074 | 456 | 6 | 0 | 0 | 0 | 3606 | logfile |
✔ | 7SP1 | 25364 | 2022-12-11 | 2021-11-02 | 3.4 | 3.65 | — | 3.9 | 0.006 | 1.29 | 0.0 | 0.07 | 19.39 | 0.01 | 2.288 | 13.34 | 0.00 | 2.9 | 97.1 | 0.0 | -2.42 | 0.41 | 0.72 | 4.86 | 4.1 | 0.005 | 0.87 | 0.0 | 0.05 | 19.75 | 0.01 | 2.072 | 19.29 | 0.20 | 14.9 | 85.1 | 0.0 | -4.13 | 1.70 | 0.39 | 0.75 | 4.00 | 4343 | 540 | 17 | 20 | 0 | 0 | 0 | logfile |
✔ | 6C4H | 7340 | 2022-12-13 | 2018-01-12 | 3.1 | 3.33 | — | 3.3 | 0.011 | 1.19 | 1.0 | 0.11 | 16.68 | 0.05 | 1.913 | 7.76 | 6.80 | 5.3 | 94.7 | 0.0 | -2.61 | 0.43 | 0.85 | 3.61 | 3.3 | 0.008 | 0.92 | 0.0 | 0.04 | 15.73 | 0.01 | 1.777 | 7.89 | 0.68 | 7.0 | 93.0 | 0.0 | -2.37 | 0.39 | 0.39 | 0.85 | 4.75 | 15326 | 184 | 8 | 648 | 34 | 0 | 0 | logfile |