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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8T53 | 41042 | 2024-03-11 | 2023-06-12 | 4.1 | 4.29 | 4.68 | 4.1 | 0.002 | 0.59 | 0.0 | 0.04 | 12.60 | 0.00 | 2.201 | 11.96 | 0.00 | 1.8 | 98.2 | 0.0 | 0.81 | 0.45 | 0.45 | — | 4.1 | 0.002 | 0.60 | 0.0 | 0.04 | 13.37 | 0.00 | 2.225 | 11.66 | 0.00 | 2.3 | 97.7 | 0.0 | 1.65 | 0.60 | 0.46 | 0.47 | — | 6660 | 796 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GH8 | 40036 | 2024-03-11 | 2023-03-09 | 4.3 | 4.08 | 3.85 | 4.0 | 0.004 | 0.79 | 0.0 | 0.05 | 26.60 | 0.01 | 2.219 | 10.05 | 0.23 | 12.7 | 86.8 | 0.5 | -3.65 | 0.48 | 0.44 | — | 4.0 | 0.003 | 0.70 | 0.0 | 0.04 | 26.10 | 0.01 | 2.195 | 8.82 | 0.00 | 12.0 | 87.8 | 0.2 | -3.87 | 1.06 | 0.51 | 0.47 | — | 6991 | 559 | 8 | 136 | 0 | 0 | 0 | logfile |
✔ | 8ET2 | 28584 | 2024-03-24 | 2022-10-15 | 4.96 | 5.56 | 5.14 | 5.6 | 0.004 | 1.00 | 0.0 | 0.05 | 13.70 | 0.01 | 1.879 | 23.18 | 0.00 | 11.7 | 88.3 | 0.0 | -4.06 | 0.69 | 0.49 | — | 5.5 | 0.003 | 0.80 | 0.0 | 0.05 | 13.75 | 0.00 | 1.987 | 16.56 | 0.00 | 9.5 | 90.5 | 0.0 | -3.48 | 0.68 | 0.69 | 0.48 | — | 43584 | 5304 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E4C | 27888 | 2024-03-11 | 2022-08-18 | 4.0 | 3.22 | 3.15 | 3.1 | 0.005 | 0.84 | 2.0 | 0.07 | 16.28 | 0.01 | 2.251 | 7.49 | 1.84 | 6.1 | 93.9 | 0.0 | -0.24 | 0.48 | 0.49 | — | 3.1 | 0.004 | 0.81 | 0.0 | 0.05 | 17.30 | 0.01 | 2.083 | 16.24 | 5.65 | 6.2 | 93.8 | 0.0 | -0.70 | 1.27 | 0.48 | 0.48 | — | 6398 | 805 | 6 | 0 | 5 | 0 | 0 | logfile |
✔ | 8SPo | 40680 | 2024-03-21 | 2023-05-03 | 2.98 | 2.34 | 3.17 | 2.1 | 0.004 | 0.60 | 0.0 | 0.26 | 18.84 | 0.00 | 0.334 | 11.05 | 0.00 | 6.0 | 94.0 | 0.0 | -1.15 | 0.46 | 0.30 | 0.19 | 1.6 | 0.004 | 0.72 | 0.0 | 0.04 | 18.88 | 0.00 | 1.817 | 12.21 | 2.22 | 6.6 | 93.4 | 0.0 | -1.13 | 1.34 | 0.57 | 0.49 | 1.24 | 31307 | 3428 | 22 | 154 | 6 | 0 | 0 | logfile |
✔ | 7MDW | 23782 | 2024-03-10 | 2021-04-06 | 3.58 | 2.25 | 3.45 | 1.5 | 0.002 | 0.55 | 0.0 | 0.04 | 12.68 | 0.00 | 2.293 | 8.46 | 0.00 | 6.5 | 93.5 | 0.0 | -1.58 | 0.52 | 0.44 | 1.65 | 1.5 | 0.004 | 0.69 | 0.0 | 0.05 | 15.11 | 0.00 | 2.199 | 17.53 | 3.10 | 11.7 | 88.3 | 0.0 | -2.94 | 1.34 | 0.56 | 0.49 | 1.65 | 3392 | 435 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 6EU3 | 3958 | 2024-03-23 | 2017-10-27 | 3.3 | 3.38 | — | 6.0 | 0.004 | 1.06 | 0.0 | 0.06 | 11.41 | 0.01 | 1.167 | 5.05 | 0.26 | 12.9 | 86.6 | 0.5 | -5.18 | 0.23 | 0.03 | 0.17 | 3.3 | 0.003 | 0.81 | 0.0 | 0.04 | 15.10 | 0.00 | 2.016 | 13.52 | 2.04 | 11.5 | 88.3 | 0.3 | -2.44 | 1.48 | 0.54 | 0.49 | 0.40 | 38330 | 4825 | 22 | 0 | 7 | 0 | 0 | logfile |
✔ | 7K8D | 22728 | 2024-03-15 | 2020-09-26 | 4.33 | 4.48 | — | 4.7 | 0.004 | 1.12 | 0.0 | 0.06 | 12.53 | 0.01 | 2.205 | 23.61 | 1.86 | 4.3 | 95.7 | 0.0 | -2.98 | 0.33 | 0.40 | — | 4.6 | 0.004 | 0.85 | 0.0 | 0.04 | 13.28 | 0.01 | 2.153 | 17.55 | 0.00 | 5.4 | 94.6 | 0.0 | 0.21 | 1.47 | 0.43 | 0.49 | — | 5529 | 725 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oTi | 13060 | 2024-03-14 | 2021-06-10 | 4.2 | 4.80 | — | 7.9 | 0.014 | 1.99 | 12.0 | 0.10 | 16.95 | 0.02 | 2.507 | 0.59 | 4.71 | 10.8 | 87.9 | 1.4 | -3.63 | 0.36 | 0.23 | — | 4.9 | 0.003 | 0.81 | 0.0 | 0.04 | 14.46 | 0.00 | 2.116 | 16.85 | 0.00 | 6.6 | 92.9 | 0.5 | -1.00 | 1.72 | 0.51 | 0.49 | — | 9171 | 1182 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AST | 11904 | 2024-03-22 | 2020-10-28 | 4.0 | 3.84 | — | 3.6 | 0.016 | 1.10 | 1.0 | 0.06 | 15.36 | 0.01 | 1.913 | 32.62 | 0.00 | 20.8 | 78.6 | 0.6 | -4.78 | 0.61 | 0.46 | — | 3.6 | 0.016 | 0.98 | 0.0 | 0.05 | 17.70 | 0.01 | 2.094 | 26.83 | 2.78 | 15.8 | 83.9 | 0.3 | -3.72 | 1.41 | 0.63 | 0.49 | — | 34518 | 4365 | 17 | 0 | 36 | 0 | 0 | logfile |
✔ | 7JGJ | 22328 | 2024-03-16 | 2020-07-19 | 4.8 | 7.06 | — | 6.5 | 0.013 | 2.22 | 17.0 | 0.31 | 17.49 | 0.01 | 1.656 | 7.23 | 12.68 | 7.2 | 91.6 | 1.2 | -2.09 | 0.88 | 0.68 | — | 6.5 | 0.004 | 0.79 | 0.0 | 0.04 | 13.55 | 0.00 | 2.116 | 36.11 | 0.07 | 8.7 | 91.2 | 0.1 | -2.28 | 1.24 | 0.85 | 0.50 | — | 13324 | 1707 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ENR | 28277 | 2024-03-11 | 2022-09-30 | 3.8 | 4.03 | 4.04 | 4.3 | 0.004 | 0.80 | 0.0 | 0.05 | 14.88 | 0.00 | 2.204 | 17.13 | 0.89 | 0.7 | 99.3 | 0.0 | 1.04 | 0.43 | 0.37 | 0.94 | 4.2 | 0.007 | 1.12 | 0.0 | 0.05 | 17.60 | 0.00 | 2.048 | 35.57 | 3.72 | 15.1 | 84.9 | 0.0 | -3.97 | 2.50 | 0.51 | 0.50 | 2.45 | 6392 | 888 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SH2 | 40477 | 2024-03-17 | 2023-04-13 | 3.74 | 3.89 | 3.81 | 3.9 | 0.006 | 1.20 | 0.0 | 0.06 | 13.35 | 0.01 | 2.321 | 14.58 | 0.35 | 4.8 | 95.2 | 0.0 | -2.82 | 0.58 | 0.42 | 0.91 | 3.9 | 0.004 | 0.81 | 0.0 | 0.04 | 15.51 | 0.00 | 2.056 | 24.77 | 2.94 | 5.1 | 94.9 | 0.0 | -1.81 | 1.46 | 0.64 | 0.51 | 1.49 | 18038 | 2254 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NKC | 12437 | 2024-03-20 | 2021-02-17 | 4.46 | 4.76 | — | 4.6 | 0.004 | 0.72 | 0.0 | 0.04 | 14.45 | 0.01 | 1.795 | 9.79 | 0.25 | 4.3 | 95.7 | 0.1 | -0.76 | 0.51 | 0.30 | — | 4.7 | 0.003 | 0.65 | 0.0 | 0.04 | 14.70 | 0.00 | 1.890 | 17.89 | 0.00 | 6.2 | 93.8 | 0.0 | -0.76 | 1.91 | 0.63 | 0.51 | — | 28788 | 1795 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 8GTD | 34250 | 2024-03-21 | 2022-09-08 | 4.7 | 4.27 | 4.25 | 4.2 | 0.014 | 2.16 | 0.0 | 0.00 | 5.49 | 0.01 | 2.285 | 3.73 | 0.00 | 8.4 | 90.0 | 1.6 | 0.41 | 0.50 | 0.44 | — | 4.2 | 0.004 | 0.93 | 0.0 | 0.00 | 6.20 | 0.00 | 2.228 | 4.76 | 0.00 | 19.1 | 80.2 | 0.7 | -2.63 | 1.26 | 0.52 | 0.51 | — | 29580 | 7392 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DRo | 27679 | 2024-03-11 | 2022-07-21 | 4.06 | 4.13 | 4.38 | 4.1 | 0.004 | 0.96 | 0.0 | 0.05 | 15.27 | 0.01 | 2.265 | 14.83 | 0.40 | 7.3 | 92.7 | 0.0 | -3.39 | 0.46 | 0.53 | — | 4.1 | 0.003 | 0.79 | 0.0 | 0.04 | 13.73 | 0.01 | 2.171 | 19.16 | 0.00 | 9.0 | 91.0 | 0.0 | -2.44 | 2.62 | 0.45 | 0.51 | — | 6642 | 814 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DGi | 27423 | 2024-03-16 | 2022-06-23 | 3.94 | 4.27 | 4.04 | 4.1 | 0.005 | 1.16 | 4.0 | 0.06 | 15.93 | 0.01 | 2.263 | 8.89 | 0.67 | 5.9 | 93.8 | 0.3 | -2.32 | 0.67 | 0.52 | 0.27 | 4.1 | 0.004 | 0.75 | 0.0 | 0.04 | 16.48 | 0.00 | 2.047 | 20.88 | 3.53 | 6.9 | 92.9 | 0.2 | -0.43 | 0.55 | 0.66 | 0.51 | 0.27 | 13580 | 1690 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Z0L | 14427 | 2024-03-16 | 2022-02-23 | 4.0 | 4.43 | 4.11 | 4.3 | 0.005 | 0.95 | 0.0 | 0.06 | 15.67 | 0.01 | 2.223 | 7.63 | 0.65 | 5.5 | 94.5 | 0.0 | -0.67 | 0.58 | 0.49 | — | 4.4 | 0.003 | 0.67 | 0.0 | 0.04 | 15.03 | 0.00 | 2.059 | 12.52 | 2.84 | 3.7 | 96.3 | 0.0 | 0.36 | 0.94 | 0.59 | 0.52 | — | 13752 | 856 | 9 | 0 | 12 | 0 | 6713 | logfile |
✔ | 6V4J | 21041 | 2024-03-20 | 2019-11-27 | 2.97 | 2.66 | — | 2.6 | 0.010 | 1.79 | 8.0 | 0.09 | 13.20 | 0.01 | 0.244 | 16.47 | 5.36 | 4.0 | 95.7 | 0.3 | -0.54 | 0.47 | 0.48 | 1.90 | 2.6 | 0.003 | 0.80 | 0.0 | 0.04 | 15.99 | 0.00 | 2.021 | 15.56 | 3.99 | 4.9 | 95.1 | 0.0 | -1.37 | 1.49 | 0.50 | 0.52 | 1.55 | 20637 | 2697 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JC2 | 3245 | 2024-03-10 | 2015-11-15 | 3.6 | 3.58 | 3.97 | 3.7 | 0.012 | 1.63 | 2.0 | 0.08 | 14.90 | 0.01 | 1.175 | 18.51 | 7.32 | 11.5 | 84.5 | 4.0 | -4.52 | 0.22 | 0.59 | 1.48 | 3.6 | 0.003 | 0.83 | 0.0 | 0.04 | 17.12 | 0.00 | 2.209 | 14.20 | 3.66 | 6.6 | 92.8 | 0.6 | -1.30 | 2.30 | 0.23 | 0.52 | 1.41 | 3911 | 482 | 4 | 0 | 32 | 0 | 0 | logfile |