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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7TKo | 25976 | 2022-07-04 | 2022-01-17 | 4.8 | 7.71 | 5.39 | 4.4 | 0.019 | 2.23 | 0.0 | 0.00 | 6.74 | 0.01 | 2.314 | 0.12 | 0.00 | 4.8 | 93.9 | 1.4 | -0.54 | 0.62 | 0.65 | — | 4.4 | 0.018 | 1.36 | 0.0 | 0.00 | 7.58 | 0.01 | 1.972 | 30.28 | 0.00 | 15.9 | 83.8 | 0.3 | -2.17 | 0.89 | 0.84 | 0.82 | — | 20229 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TKM | 25974 | 2022-07-04 | 2022-01-17 | 4.5 | 7.58 | 4.88 | 4.3 | 0.019 | 2.22 | 0.0 | 0.00 | 6.78 | 0.01 | 2.385 | 0.12 | 0.00 | 4.3 | 94.2 | 1.5 | -0.44 | 0.59 | 0.59 | — | 4.3 | 0.005 | 0.90 | 0.0 | 0.00 | 6.11 | 0.00 | 2.052 | 17.76 | 0.00 | 11.5 | 88.1 | 0.4 | -1.22 | 1.55 | 0.83 | 0.81 | — | 20227 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TJY | 25946 | 2022-07-04 | 2022-01-17 | 3.8 | 4.84 | 3.78 | 3.6 | 0.020 | 2.29 | 0.0 | 0.00 | 6.75 | 0.01 | 2.333 | 0.12 | 0.00 | 4.3 | 94.3 | 1.5 | -0.54 | 0.59 | 0.68 | — | 3.7 | 0.006 | 0.89 | 0.0 | 0.00 | 5.53 | 0.00 | 2.131 | 6.70 | 0.00 | 11.9 | 87.8 | 0.3 | -0.26 | 1.48 | 0.84 | 0.80 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N95 | 24250 | 2022-07-03 | 2021-06-16 | 4.1 | 3.45 | — | 2.1 | 0.002 | 0.74 | 0.0 | 0.00 | 5.05 | 0.00 | 2.573 | 0.10 | 0.00 | 7.1 | 92.3 | 0.6 | -1.14 | 0.78 | 0.70 | — | 2.1 | 0.003 | 0.89 | 0.0 | 0.00 | 3.97 | 0.00 | 2.552 | 3.52 | 0.00 | 14.4 | 85.4 | 0.2 | -2.79 | 1.72 | 0.84 | 0.81 | — | 7299 | 2433 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TK8 | 25960 | 2022-07-04 | 2022-01-17 | 4.7 | 7.79 | 12.86 | 4.4 | 0.019 | 2.21 | 0.0 | 0.00 | 6.68 | 0.01 | 2.390 | 0.08 | 0.00 | 4.1 | 94.4 | 1.5 | -0.46 | 0.60 | 0.61 | — | 4.4 | 0.008 | 1.17 | 0.0 | 0.00 | 6.80 | 0.01 | 1.933 | 31.40 | 0.00 | 11.8 | 87.8 | 0.4 | -1.32 | 1.58 | 0.81 | 0.81 | — | 20227 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TKP | 25977 | 2022-07-04 | 2022-01-17 | 4.6 | 7.57 | 4.97 | 4.4 | 0.019 | 2.20 | 0.0 | 0.00 | 6.68 | 0.01 | 2.352 | 0.12 | 0.00 | 4.2 | 94.5 | 1.3 | -0.50 | 0.60 | 0.63 | — | 4.4 | 0.004 | 0.83 | 0.0 | 0.00 | 5.46 | 0.00 | 2.080 | 13.25 | 0.00 | 10.0 | 89.8 | 0.2 | 0.34 | 0.82 | 0.82 | 0.84 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JG6 | 22312 | 2022-07-04 | 2020-07-18 | 3.7 | 2.39 | 3.79 | 2.2 | 0.008 | 1.40 | 0.0 | 0.00 | 6.55 | 0.01 | 2.433 | 0.00 | 0.00 | 2.9 | 97.0 | 0.1 | -0.59 | 0.62 | 0.54 | — | 2.3 | 0.003 | 0.91 | 0.0 | 0.00 | 5.94 | 0.00 | 2.230 | 1.09 | 0.00 | 10.6 | 89.3 | 0.1 | -1.07 | 1.66 | 0.70 | 0.68 | — | 19320 | 4819 | 20 | 0 | 11 | 0 | 0 | logfile |
✔ | 7DZW | 30915 | 2022-07-04 | 2021-01-26 | 3.45 | 4.19 | 3.55 | 3.3 | 0.019 | 2.27 | 0.0 | 0.00 | 4.81 | 0.01 | 2.240 | 2.28 | 0.00 | 5.1 | 93.3 | 1.6 | -1.27 | 0.44 | 0.25 | — | 3.3 | 0.004 | 0.92 | 0.0 | 0.00 | 6.11 | 0.00 | 2.144 | 5.08 | 0.00 | 15.8 | 84.1 | 0.1 | -2.69 | 2.06 | 0.77 | 0.73 | — | 13452 | 3363 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DZY | 30921 | 2022-07-04 | 2021-01-26 | 3.6 | 3.83 | 3.38 | 3.1 | 0.020 | 2.12 | 0.0 | 0.00 | 4.32 | 0.01 | 1.980 | 3.14 | 0.00 | 3.7 | 95.4 | 0.9 | -0.42 | 0.43 | 0.27 | — | 3.3 | 0.003 | 0.85 | 0.0 | 0.00 | 5.31 | 0.00 | 2.074 | 2.81 | 0.00 | 11.3 | 88.5 | 0.2 | -2.84 | 2.17 | 0.71 | 0.71 | — | 18708 | 4677 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N9Q | 24259 | 2022-07-03 | 2021-06-18 | 4.6 | 4.92 | — | 2.3 | 0.002 | 0.88 | 0.0 | 0.00 | 5.65 | 0.00 | 2.600 | 0.00 | 0.00 | 8.9 | 90.3 | 0.8 | -1.59 | 0.79 | 0.69 | — | 2.5 | 0.003 | 1.01 | 0.0 | 0.00 | 5.01 | 0.00 | 2.577 | 6.97 | 0.00 | 13.1 | 86.1 | 0.9 | -4.51 | 2.40 | 0.85 | 0.81 | — | 6945 | 2315 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TK0 | 25948 | 2022-07-04 | 2022-01-17 | 4.4 | 6.63 | 4.39 | 4.1 | 0.019 | 2.21 | 0.0 | 0.00 | 6.55 | 0.01 | 2.394 | 0.08 | 0.00 | 3.9 | 94.5 | 1.5 | -0.40 | 0.58 | 0.62 | — | 4.1 | 0.004 | 0.83 | 0.0 | 0.00 | 5.40 | 0.00 | 2.153 | 9.44 | 0.00 | 10.9 | 88.8 | 0.3 | -0.57 | 0.81 | 0.83 | 0.81 | — | 20220 | 5054 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TJZ | 25947 | 2022-07-04 | 2022-01-17 | 4.4 | 7.00 | 4.54 | 4.2 | 0.019 | 2.21 | 0.0 | 0.00 | 6.67 | 0.01 | 2.384 | 0.19 | 0.00 | 4.2 | 94.2 | 1.6 | -0.41 | 0.58 | 0.63 | — | 4.3 | 0.012 | 0.93 | 0.0 | 0.00 | 5.55 | 0.00 | 2.081 | 10.56 | 0.00 | 10.4 | 89.3 | 0.3 | 0.17 | 0.73 | 0.79 | 0.83 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TKG | 25968 | 2022-07-04 | 2022-01-17 | 4.5 | 7.60 | 4.79 | 4.2 | 0.019 | 2.20 | 0.0 | 0.00 | 6.95 | 0.01 | 2.361 | 0.08 | 0.00 | 4.3 | 94.2 | 1.5 | -0.60 | 0.58 | 0.61 | — | 4.2 | 0.005 | 0.95 | 0.0 | 0.00 | 6.53 | 0.00 | 2.099 | 18.88 | 0.00 | 13.4 | 86.4 | 0.2 | -2.17 | 1.58 | 0.81 | 0.81 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oG3 | 20051 | 2022-07-02 | 2019-04-01 | 4.1 | 5.37 | — | 6.5 | 0.005 | 1.53 | 0.0 | 0.00 | 0.93 | 0.00 | 2.539 | 0.00 | 0.00 | 0.0 | 99.2 | 0.8 | 0.27 | 0.46 | 0.48 | — | 6.0 | 0.006 | 1.22 | 0.0 | 0.00 | 8.59 | 0.00 | 2.605 | 57.07 | 0.00 | 14.1 | 85.9 | 0.0 | -1.78 | 2.19 | 0.66 | 0.84 | — | 1215 | 396 | 4 | 0 | 9 | 0 | 0 | logfile |
✔ | 6TNG | 10532 | 2022-07-03 | 2019-12-07 | 4.1 | 4.25 | 3.91 | 4.0 | 0.008 | 1.39 | 0.0 | 0.00 | 8.74 | 0.01 | 2.183 | 11.35 | 0.00 | 18.9 | 80.2 | 0.8 | -5.16 | 0.75 | 0.70 | — | 4.0 | 0.006 | 1.02 | 0.0 | 0.00 | 7.42 | 0.01 | 2.133 | 21.25 | 0.00 | 25.4 | 74.3 | 0.3 | -3.93 | 0.35 | 0.76 | 0.72 | — | 8240 | 2060 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 5VLZ | 8709 | 2022-07-06 | 2017-04-26 | 4.4 | 4.55 | — | 4.4 | 0.006 | 0.89 | 0.0 | 0.00 | 5.88 | 0.00 | 2.272 | 2.04 | 0.00 | 6.1 | 93.9 | 0.0 | -1.92 | 0.80 | 0.66 | — | 4.4 | 0.003 | 0.81 | 0.0 | 0.00 | 5.63 | 0.00 | 2.281 | 1.18 | 0.00 | 6.0 | 94.0 | 0.0 | -1.57 | 1.65 | 0.83 | 0.78 | — | 96897 | 24179 | 181 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JG7 | 22313 | 2022-07-04 | 2020-07-18 | 3.5 | 2.41 | 3.57 | 3.4 | 0.008 | 1.54 | 0.0 | 0.00 | 6.82 | 0.01 | 2.433 | 0.00 | 0.00 | 2.9 | 96.9 | 0.1 | -0.73 | 0.63 | 0.55 | — | 2.3 | 0.006 | 1.15 | 0.0 | 0.00 | 7.25 | 0.01 | 2.136 | 3.94 | 0.00 | 14.0 | 85.9 | 0.1 | -2.12 | 1.65 | 0.74 | 0.72 | — | 19316 | 4818 | 20 | 0 | 11 | 0 | 0 | logfile |
✔ | 6RRS | 4989 | 2022-07-06 | 2019-05-20 | 3.9 | 4.30 | 4.41 | 3.8 | 0.013 | 2.10 | 0.0 | 0.00 | 2.04 | 0.01 | 2.364 | 0.79 | 0.00 | 3.9 | 95.3 | 0.8 | -0.85 | 0.56 | 0.64 | — | 3.8 | 0.004 | 0.88 | 0.0 | 0.00 | 7.55 | 0.00 | 2.175 | 1.89 | 0.00 | 14.6 | 85.4 | 0.0 | -1.44 | 2.05 | 0.80 | 0.71 | — | 93060 | 23220 | 180 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TKQ | 25978 | 2022-07-04 | 2022-01-17 | 4.5 | 7.57 | 4.53 | 4.3 | 0.019 | 2.21 | 0.0 | 0.00 | 6.72 | 0.01 | 2.371 | 0.08 | 0.00 | 4.0 | 94.5 | 1.5 | -0.48 | 0.59 | 0.61 | — | 4.3 | 0.006 | 0.92 | 0.0 | 0.00 | 6.22 | 0.00 | 2.038 | 17.45 | 0.00 | 11.2 | 88.5 | 0.3 | -0.53 | 0.80 | 0.82 | 0.83 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TKH | 25969 | 2022-07-04 | 2022-01-17 | 4.4 | 7.29 | 4.45 | 4.2 | 0.019 | 2.19 | 0.0 | 0.00 | 6.81 | 0.01 | 2.385 | 0.08 | 0.00 | 3.9 | 94.7 | 1.4 | -0.35 | 0.59 | 0.62 | — | 4.2 | 0.013 | 1.06 | 0.0 | 0.00 | 5.97 | 0.00 | 2.028 | 15.64 | 0.00 | 10.8 | 88.9 | 0.2 | -0.13 | 1.65 | 0.83 | 0.84 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |