The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7X3X | 32996 | 2023-12-09 | 2022-03-01 | 3.2 | 3.69 | — | 3.2 | 0.012 | 0.98 | 0.0 | 0.06 | 27.92 | 0.01 | 1.947 | 10.45 | 0.16 | 0.9 | 99.1 | 0.0 | 2.89 | 0.81 | 0.65 | 2.39 | 3.2 | 0.004 | 0.58 | 0.0 | 0.03 | 27.76 | 0.00 | 2.153 | 6.94 | 0.32 | 1.6 | 98.4 | 0.0 | 3.39 | 1.76 | 0.90 | 0.88 | 2.01 | 12036 | 769 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 8CXM | 27060 | 2023-12-08 | 2022-05-21 | 3.21 | 3.69 | 3.21 | 3.6 | 0.003 | 0.50 | 0.0 | 0.03 | 14.84 | 0.00 | 2.093 | 8.38 | 0.06 | 4.1 | 95.9 | 0.0 | 3.68 | 0.56 | 0.87 | 1.34 | 3.5 | 0.003 | 0.53 | 0.0 | 0.03 | 16.26 | 0.00 | 2.108 | 6.36 | 0.15 | 3.9 | 96.1 | 0.0 | 4.62 | 1.14 | 0.58 | 0.89 | 1.41 | 109560 | 14685 | 55 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EYQ | 28692 | 2023-12-09 | 2022-10-28 | 3.3 | 3.53 | 3.35 | 3.3 | 0.005 | 0.82 | 0.0 | 0.05 | 22.23 | 0.01 | 1.460 | 13.80 | 1.29 | 6.9 | 92.5 | 0.6 | -2.06 | 0.87 | 0.78 | 1.33 | 3.3 | 0.004 | 0.62 | 0.0 | 0.03 | 22.00 | 0.00 | 2.081 | 10.08 | 0.43 | 4.6 | 95.3 | 0.1 | -0.48 | 1.59 | 0.91 | 0.88 | 1.92 | 48190 | 1965 | 18 | 1525 | 0 | 0 | 0 | logfile |
✔ | 8THU | 41272 | 2023-12-09 | 2023-07-18 | 3.1 | 3.86 | 3.08 | 3.2 | 0.004 | 0.68 | 0.0 | 0.04 | 28.56 | 0.01 | 1.528 | 5.35 | 0.00 | 2.2 | 97.8 | 0.0 | 1.40 | 0.93 | 0.89 | 2.77 | 3.2 | 0.004 | 0.57 | 0.0 | 0.03 | 28.42 | 0.00 | 2.194 | 8.77 | 0.16 | 2.4 | 97.6 | 0.0 | 2.69 | 0.29 | 0.94 | 0.90 | 2.11 | 11902 | 760 | 10 | 291 | 0 | 0 | 0 | logfile |
✔ | 7Q65 | 13852 | 2023-12-08 | 2021-11-05 | 3.32 | 2.96 | 3.26 | 3.3 | 0.016 | 1.56 | 0.0 | 0.10 | 10.10 | 0.01 | 2.159 | 3.45 | 8.33 | 10.5 | 89.5 | 0.0 | -5.74 | 0.64 | 0.85 | 4.16 | 3.3 | 0.003 | 0.65 | 0.0 | 0.03 | 13.00 | 0.00 | 2.080 | 12.96 | 1.06 | 7.7 | 92.3 | 0.0 | -5.20 | 0.70 | 0.57 | 0.83 | 4.09 | 6204 | 880 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SVF | 40789 | 2023-12-10 | 2023-05-16 | 3.2 | 4.13 | 3.32 | 3.5 | 0.003 | 0.53 | 0.0 | 0.03 | 24.96 | 0.00 | 2.220 | 6.36 | 1.28 | 1.6 | 98.4 | 0.0 | 2.82 | 0.85 | 0.83 | 1.74 | 3.5 | 0.003 | 0.59 | 0.0 | 0.03 | 26.08 | 0.00 | 2.228 | 8.70 | 0.32 | 2.8 | 97.2 | 0.0 | 2.51 | 0.68 | 0.86 | 0.85 | 1.21 | 15254 | 1189 | 13 | 295 | 0 | 0 | 0 | logfile |
✔ | 8oX1 | 17252 | 2023-12-10 | 2023-04-28 | 2.7 | 3.00 | 2.89 | 3.0 | 0.009 | 1.05 | 1.0 | 0.06 | 26.00 | 0.01 | 2.326 | 5.33 | 0.00 | 1.8 | 98.2 | 0.0 | 0.87 | 0.82 | 0.89 | 4.59 | 3.0 | 0.005 | 0.59 | 0.0 | 0.03 | 27.16 | 0.00 | 2.314 | 6.37 | 1.05 | 2.2 | 97.8 | 0.0 | 2.12 | 0.91 | 0.83 | 0.90 | 3.51 | 13258 | 905 | 19 | 290 | 0 | 11 | 0 | logfile |
✔ | 8HR5 | 34958 | 2023-12-08 | 2022-12-14 | 3.73 | 4.01 | 3.70 | 4.0 | 0.004 | 0.67 | 0.0 | 0.05 | 22.20 | 0.00 | 2.191 | 12.34 | 3.37 | 5.6 | 94.4 | 0.0 | 0.07 | 0.69 | 0.72 | 2.02 | 4.0 | 0.003 | 0.60 | 0.0 | 0.03 | 22.16 | 0.00 | 2.110 | 8.28 | 0.48 | 4.4 | 95.6 | 0.0 | 1.68 | 1.28 | 0.70 | 0.73 | 1.19 | 7595 | 711 | 5 | 123 | 0 | 0 | 0 | logfile |
✔ | 8iBY | 35349 | 2023-12-09 | 2023-02-10 | 3.47 | 3.81 | 3.66 | 3.7 | 0.003 | 0.62 | 0.0 | 0.03 | 23.00 | 0.01 | 2.187 | 11.40 | 0.00 | 4.6 | 95.3 | 0.1 | 0.06 | 0.77 | 0.76 | 1.66 | 3.7 | 0.002 | 0.60 | 0.0 | 0.03 | 22.96 | 0.00 | 2.188 | 10.87 | 0.30 | 3.7 | 96.2 | 0.1 | 0.39 | 1.59 | 0.75 | 0.73 | 1.66 | 10503 | 793 | 3 | 198 | 1 | 0 | 0 | logfile |
✔ | 8SC6 | 40339 | 2023-12-07 | 2023-04-04 | 3.13 | 3.36 | 3.12 | 3.4 | 0.003 | 0.50 | 0.0 | 0.03 | 8.71 | 0.00 | 2.273 | 3.28 | 0.81 | 0.9 | 99.1 | 0.0 | 2.80 | 0.58 | 0.82 | 2.08 | 3.4 | 0.002 | 0.48 | 0.0 | 0.03 | 12.61 | 0.00 | 2.228 | 4.99 | 0.00 | 1.4 | 98.6 | 0.0 | 2.53 | 0.49 | 0.55 | 0.81 | 1.82 | 3479 | 447 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 6TMi | 10522 | 2023-12-09 | 2019-12-04 | 3.5 | 3.96 | 3.49 | 3.8 | 0.006 | 0.64 | 0.0 | 0.04 | 16.16 | 0.01 | 2.113 | 9.16 | 0.58 | 10.0 | 90.0 | 0.0 | -4.41 | 0.53 | 0.77 | 1.38 | 3.8 | 0.003 | 0.63 | 0.0 | 0.03 | 17.26 | 0.00 | 2.061 | 9.99 | 0.19 | 7.6 | 92.4 | 0.0 | 0.66 | 1.47 | 0.53 | 0.80 | 1.65 | 9606 | 605 | 5 | 0 | 0 | 0 | 4842 | logfile |
✔ | 8FTi | 29433 | 2023-12-08 | 2023-01-12 | 3.5 | 3.80 | 3.64 | 3.7 | 0.002 | 0.56 | 0.0 | 0.03 | 17.21 | 0.00 | 2.237 | 9.26 | 4.55 | 4.5 | 95.5 | 0.0 | 0.23 | 0.77 | 0.75 | 2.02 | 3.7 | 0.002 | 0.57 | 0.0 | 0.03 | 18.20 | 0.00 | 2.176 | 10.77 | 0.16 | 4.9 | 95.1 | 0.0 | 0.60 | 0.97 | 0.76 | 0.76 | 1.95 | 8126 | 737 | 2 | 97 | 0 | 0 | 0 | logfile |
✔ | 8SRP | 40737 | 2023-12-09 | 2023-05-05 | 3.7 | 3.93 | 3.67 | 3.7 | 0.004 | 0.66 | 0.0 | 0.03 | 28.75 | 0.01 | 2.262 | 9.34 | 0.47 | 6.5 | 93.5 | 0.0 | -1.47 | 0.74 | 0.72 | 2.00 | 3.7 | 0.003 | 0.62 | 0.0 | 0.03 | 28.34 | 0.00 | 2.203 | 10.19 | 1.40 | 6.9 | 93.1 | 0.0 | -0.18 | 0.91 | 0.74 | 0.71 | 2.45 | 9516 | 849 | 14 | 214 | 0 | 0 | 0 | logfile |
✔ | 8T2R | 40985 | 2023-12-10 | 2023-06-06 | 3.1 | 3.34 | 3.14 | 3.3 | 0.006 | 0.96 | 0.0 | 0.05 | 24.25 | 0.01 | 2.174 | 4.24 | 1.15 | 3.1 | 96.3 | 0.5 | -2.13 | 0.68 | 0.83 | 2.96 | 3.3 | 0.004 | 0.62 | 0.0 | 0.03 | 23.90 | 0.00 | 2.077 | 11.32 | 1.15 | 4.5 | 95.0 | 0.5 | 0.65 | 0.36 | 0.75 | 0.86 | 2.95 | 15063 | 388 | 4 | 552 | 15 | 0 | 0 | logfile |
✔ | 8BF8 | 16016 | 2023-12-07 | 2022-10-24 | 2.8 | 3.14 | 2.80 | 3.1 | 0.003 | 0.47 | 0.0 | 0.03 | 20.52 | 0.00 | 2.203 | 8.73 | 0.93 | 2.7 | 97.3 | 0.0 | 0.92 | 0.64 | 0.76 | 2.97 | 3.1 | 0.003 | 0.56 | 0.0 | 0.03 | 20.84 | 0.00 | 2.088 | 9.59 | 4.19 | 3.8 | 96.2 | 0.0 | 0.55 | 0.88 | 0.59 | 0.75 | 2.94 | 4686 | 302 | 2 | 111 | 0 | 0 | 0 | logfile |
✔ | 6WCB | 21605 | 2023-12-09 | 2020-03-30 | 3.17 | 3.17 | — | 3.2 | 0.005 | 0.41 | 0.0 | 0.03 | 13.87 | 0.00 | 2.128 | 2.50 | 1.29 | 0.8 | 99.2 | 0.0 | 0.58 | 0.55 | 0.77 | 2.89 | 3.2 | 0.003 | 0.49 | 0.0 | 0.03 | 15.42 | 0.00 | 2.060 | 3.53 | 0.00 | 1.5 | 98.5 | 0.0 | 3.43 | 1.29 | 0.54 | 0.79 | 2.44 | 11647 | 734 | 6 | 0 | 7 | 40 | 5904 | logfile |
✔ | 8H1J | 34428 | 2023-12-07 | 2022-10-03 | 3.1 | 3.36 | 3.20 | 3.3 | 0.005 | 0.53 | 0.0 | 0.03 | 21.48 | 0.00 | 2.232 | 8.41 | 5.19 | 1.7 | 98.3 | 0.0 | 2.19 | 0.62 | 0.67 | 2.02 | 3.3 | 0.003 | 0.50 | 0.0 | 0.03 | 21.60 | 0.00 | 2.177 | 7.53 | 0.65 | 2.2 | 97.8 | 0.0 | 1.57 | 0.61 | 0.71 | 0.78 | 2.01 | 5773 | 362 | 5 | 134 | 1 | 0 | 0 | logfile |
✔ | 7XZY | 33534 | 2023-12-10 | 2022-06-03 | 3.97 | 4.47 | 3.88 | 3.9 | 0.004 | 0.69 | 0.0 | 0.04 | 27.84 | 0.00 | 2.062 | 14.33 | 0.16 | 1.9 | 98.1 | 0.0 | 1.04 | 0.83 | 0.69 | 0.95 | 4.0 | 0.005 | 0.70 | 0.0 | 0.03 | 28.32 | 0.00 | 2.043 | 9.63 | 0.47 | 3.5 | 96.5 | 0.0 | 2.19 | 2.26 | 0.92 | 0.88 | 1.06 | 12821 | 762 | 10 | 330 | 0 | 0 | 0 | logfile |
✔ | 8EX9 | 28655 | 2023-12-07 | 2022-10-25 | 2.96 | 3.27 | 3.00 | 3.2 | 0.003 | 0.49 | 0.0 | 0.03 | 23.30 | 0.00 | 2.200 | 13.65 | 0.79 | 4.3 | 95.7 | 0.0 | -1.52 | 0.60 | 0.71 | 4.83 | 3.2 | 0.003 | 0.55 | 0.0 | 0.03 | 23.18 | 0.00 | 2.191 | 14.51 | 3.17 | 4.9 | 95.1 | 0.0 | -0.44 | 0.27 | 0.62 | 0.73 | 4.29 | 4199 | 166 | 4 | 139 | 0 | 0 | 0 | logfile |
✔ | 6oFE | 20043 | 2023-12-09 | 2019-03-29 | 3.61 | 3.70 | — | 3.6 | 0.006 | 0.63 | 0.0 | 0.04 | 10.07 | 0.01 | 2.325 | 1.57 | 0.00 | 5.3 | 94.7 | 0.0 | -6.24 | 0.64 | 0.85 | 2.72 | 3.6 | 0.003 | 0.56 | 0.0 | 0.03 | 16.25 | 0.00 | 2.166 | 6.08 | 0.46 | 3.9 | 96.1 | 0.0 | 3.89 | 0.61 | 0.65 | 0.86 | 1.19 | 12220 | 1560 | 20 | 0 | 0 | 0 | 0 | logfile |