The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8E33 | 27855 | 2023-08-13 | 2022-08-16 | 2.23 | 2.91 | 2.58 | 2.7 | 0.006 | 0.50 | 0.0 | 0.04 | 12.84 | 0.02 | 1.965 | 2.00 | 0.53 | 4.6 | 95.4 | 0.0 | 0.48 | 0.70 | 0.90 | 5.42 | 2.7 | 0.004 | 0.58 | 0.0 | 0.03 | 13.61 | 0.01 | 1.956 | 3.48 | 1.17 | 6.0 | 94.0 | 0.0 | 0.12 | 0.21 | 0.69 | 0.89 | 5.42 | 115769 | 1179 | 11 | 3015 | 1 | 1 | 41830 | logfile |
✔ | 8FKT | 29256 | 2023-08-20 | 2022-12-21 | 2.81 | 2.81 | 2.95 | 2.9 | 0.004 | 0.59 | 0.0 | 0.04 | 13.12 | 0.00 | 1.945 | 1.91 | 0.02 | 1.3 | 98.7 | 0.0 | 1.55 | 0.74 | 0.81 | 3.63 | 2.9 | 0.003 | 0.51 | 0.0 | 0.03 | 14.22 | 0.00 | 1.963 | 5.57 | 1.34 | 1.8 | 98.2 | 0.0 | 1.73 | 0.41 | 0.76 | 0.86 | 3.14 | 134945 | 10797 | 65 | 2347 | 69 | 0 | 0 | logfile |
✔ | 7U0G | 26258 | 2023-08-15 | 2022-02-18 | 2.6 | 3.10 | — | 2.9 | 0.006 | 0.78 | 2.0 | 0.04 | 25.66 | 0.00 | 2.154 | 14.81 | 0.87 | 3.8 | 96.1 | 0.1 | 0.26 | 0.84 | 0.87 | 2.78 | 2.9 | 0.004 | 0.53 | 0.0 | 0.03 | 26.22 | 0.00 | 1.948 | 23.88 | 2.14 | 4.7 | 95.3 | 0.0 | 2.10 | 1.13 | 0.82 | 0.86 | 2.66 | 18571 | 1510 | 15 | 266 | 0 | 0 | 1244 | logfile |
✔ | 8F53 | 28859 | 2023-08-27 | 2022-11-11 | 2.93 | 3.13 | 2.94 | 3.1 | 0.002 | 0.43 | 0.0 | 0.03 | 11.82 | 0.00 | 2.361 | 1.10 | 0.00 | 0.6 | 99.4 | 0.0 | 1.20 | 0.69 | 0.77 | 2.64 | 3.1 | 0.004 | 0.52 | 0.0 | 0.03 | 16.73 | 0.00 | 2.207 | 5.29 | 4.09 | 0.3 | 99.7 | 0.0 | 2.97 | 1.13 | 0.61 | 0.81 | 2.46 | 51060 | 3240 | 60 | 0 | 0 | 0 | 26460 | logfile |
✔ | 7U0J | 26261 | 2023-08-14 | 2022-02-18 | 2.7 | 3.24 | — | 3.1 | 0.008 | 0.93 | 3.0 | 0.05 | 27.09 | 0.01 | 2.088 | 6.00 | 0.39 | 4.6 | 95.3 | 0.1 | -0.97 | 0.80 | 0.82 | 3.63 | 3.1 | 0.003 | 0.59 | 0.0 | 0.03 | 27.70 | 0.00 | 2.195 | 8.37 | 2.15 | 4.3 | 95.7 | 0.0 | 1.50 | 0.35 | 0.76 | 0.78 | 3.65 | 15622 | 1210 | 12 | 298 | 0 | 0 | 0 | logfile |
✔ | 7Y6P | 33645 | 2023-08-21 | 2022-06-21 | 3.3 | 3.20 | 3.21 | 3.3 | 0.005 | 0.66 | 0.0 | 0.04 | 15.54 | 0.00 | 1.892 | 8.44 | 0.00 | 2.3 | 97.7 | 0.0 | 3.78 | 0.77 | 0.89 | 3.18 | 3.3 | 0.005 | 0.69 | 0.0 | 0.03 | 16.67 | 0.00 | 2.091 | 3.58 | 0.36 | 2.0 | 98.0 | 0.0 | 4.44 | 0.20 | 0.76 | 0.90 | 2.29 | 31428 | 3772 | 48 | 0 | 60 | 0 | 0 | logfile |
✔ | 3J89 | 6123 | 2023-08-11 | 2014-10-07 | 3.6 | 2.21 | — | 3.5 | 0.022 | 1.64 | 0.0 | 0.10 | 11.97 | 0.01 | 2.578 | 2.11 | 0.00 | 3.5 | 96.5 | 0.0 | -0.96 | 0.83 | 0.81 | 0.77 | 3.2 | 0.003 | 0.49 | 0.0 | 0.03 | 20.68 | 0.00 | 2.114 | 8.31 | 1.00 | 0.6 | 99.4 | 0.0 | 3.03 | 1.98 | 0.81 | 0.79 | 0.31 | 9025 | 551 | 19 | 0 | 0 | 0 | 4598 | logfile |
✔ | 6XMF | 22257 | 2023-08-10 | 2020-06-30 | 3.1 | 3.28 | — | 3.3 | 0.002 | 0.56 | 0.0 | 0.03 | 16.46 | 0.00 | 2.246 | 8.60 | 0.00 | 6.8 | 93.2 | 0.0 | -1.78 | 0.68 | 0.71 | 2.25 | 3.2 | 0.003 | 0.60 | 0.0 | 0.03 | 17.60 | 0.00 | 2.155 | 15.19 | 0.40 | 9.1 | 90.9 | 0.0 | -0.44 | 0.47 | 0.70 | 0.76 | 2.47 | 7382 | 627 | 3 | 109 | 1 | 0 | 0 | logfile |
✔ | 8DFU | 27414 | 2023-08-17 | 2022-06-22 | 3.44 | 3.84 | 3.52 | 3.8 | 0.010 | 0.92 | 0.0 | 1.18 | 24.51 | 0.00 | 2.461 | 3.48 | 0.00 | 1.2 | 98.8 | 0.0 | 1.08 | 0.59 | 0.85 | 1.18 | 3.8 | 0.003 | 0.53 | 0.0 | 0.03 | 20.00 | 0.00 | 2.271 | 5.44 | 0.35 | 2.4 | 97.6 | 0.0 | 4.52 | 1.18 | 0.58 | 0.84 | 0.37 | 22710 | 2520 | 56 | 0 | 60 | 0 | 0 | logfile |
✔ | 6XL0 | 22231 | 2023-08-24 | 2020-06-27 | 3.4 | 3.44 | 3.37 | 3.5 | 0.008 | 0.81 | 0.0 | 0.05 | 12.66 | 0.00 | 2.137 | 9.20 | 0.00 | 3.0 | 97.0 | 0.0 | 0.73 | 0.50 | 0.80 | 1.02 | 3.4 | 0.004 | 0.60 | 0.0 | 0.03 | 15.84 | 0.00 | 2.122 | 7.34 | 0.40 | 2.7 | 97.3 | 0.0 | 3.21 | 1.15 | 0.51 | 0.84 | 1.25 | 38820 | 5420 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 6E9Z | 9021 | 2023-08-22 | 2018-08-01 | 3.4 | 3.50 | — | 3.4 | 0.011 | 0.85 | 0.0 | 0.05 | 10.27 | 0.01 | 1.132 | 13.25 | 0.00 | 4.5 | 95.1 | 0.4 | -6.29 | 0.55 | 0.77 | 3.60 | 3.5 | 0.003 | 0.62 | 0.0 | 0.03 | 15.68 | 0.00 | 1.947 | 8.04 | 0.12 | 2.5 | 97.5 | 0.0 | 2.56 | 1.91 | 0.57 | 0.82 | 1.30 | 32652 | 2025 | 9 | 0 | 0 | 0 | 16830 | logfile |
✔ | 6E9Y | 9020 | 2023-08-09 | 2018-08-01 | 4.3 | 4.50 | — | 4.3 | 0.008 | 0.73 | 0.0 | 0.04 | 7.51 | 0.00 | 1.433 | 25.35 | 0.00 | 3.1 | 96.9 | 0.0 | -3.58 | 0.75 | 0.80 | — | 4.3 | 0.005 | 0.58 | 0.0 | 0.03 | 11.10 | 0.00 | 2.001 | 10.39 | 0.00 | 1.7 | 98.3 | 0.0 | 1.61 | 1.51 | 0.76 | 0.82 | — | 54450 | 3405 | 15 | 0 | 0 | 0 | 28155 | logfile |
✔ | 7RX5 | 24725 | 2023-08-11 | 2021-08-21 | 3.4 | 3.65 | — | 3.6 | 0.002 | 0.25 | 0.0 | 0.03 | 11.98 | 0.00 | 2.288 | 5.05 | 0.00 | 0.0 | 100.0 | 0.0 | 4.54 | 0.70 | 0.85 | 3.58 | 3.6 | 0.003 | 0.35 | 0.0 | 0.03 | 13.46 | 0.00 | 2.257 | 6.36 | 0.00 | 0.0 | 100.0 | 0.0 | 5.01 | 0.27 | 0.71 | 0.88 | 2.75 | 9120 | 1160 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ABK | 11698 | 2023-08-09 | 2020-09-07 | 3.6 | 4.10 | 3.49 | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 16.30 | 0.00 | 2.315 | 5.67 | 1.23 | 1.5 | 98.5 | 0.0 | 0.91 | 0.28 | 0.87 | 1.10 | 3.9 | 0.004 | 0.67 | 0.0 | 0.03 | 19.79 | 0.00 | 2.278 | 6.30 | 2.47 | 2.1 | 97.9 | 0.0 | 4.42 | 1.32 | 0.28 | 0.86 | 1.35 | 1574 | 196 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WKT | 21708 | 2023-08-09 | 2020-04-16 | 3.4 | 3.21 | 3.09 | 3.3 | 0.004 | 0.81 | 0.0 | 0.05 | 13.97 | 0.01 | 2.329 | 0.00 | 0.00 | 1.9 | 98.1 | 0.0 | -3.42 | 0.65 | 0.75 | 3.69 | 3.3 | 0.003 | 0.57 | 0.0 | 0.03 | 16.11 | 0.00 | 2.212 | 10.95 | 0.00 | 4.8 | 95.2 | 0.0 | 3.85 | 1.35 | 0.64 | 0.76 | 3.76 | 3152 | 424 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7X57 | 33010 | 2023-08-11 | 2022-03-04 | 3.63 | 3.95 | — | 3.8 | 0.003 | 0.63 | 0.0 | 0.03 | 28.98 | 0.01 | 2.286 | 9.90 | 0.20 | 1.4 | 98.6 | 0.0 | 0.39 | 0.82 | 0.76 | 1.31 | 3.8 | 0.003 | 0.64 | 0.0 | 0.03 | 29.85 | 0.00 | 2.269 | 13.03 | 0.99 | 2.6 | 97.4 | 0.0 | 2.84 | 0.69 | 0.83 | 0.79 | 1.19 | 9767 | 595 | 10 | 242 | 0 | 0 | 0 | logfile |
✔ | 7WLR | 32591 | 2023-08-12 | 2022-01-13 | 3.54 | 3.36 | — | 3.5 | 0.006 | 0.88 | 0.0 | 0.05 | 29.42 | 0.01 | 2.232 | 3.15 | 0.00 | 1.8 | 98.2 | 0.0 | 1.65 | 0.69 | 0.75 | 2.27 | 3.5 | 0.004 | 0.56 | 0.0 | 0.03 | 28.58 | 0.00 | 2.194 | 6.62 | 0.16 | 2.4 | 97.6 | 0.0 | 2.98 | 1.22 | 0.78 | 0.83 | 2.36 | 11922 | 754 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 8F4X | 28858 | 2023-08-22 | 2022-11-11 | 3.01 | 3.72 | 3.03 | 3.4 | 0.004 | 0.55 | 0.0 | 0.03 | 15.82 | 0.00 | 2.226 | 5.99 | 0.00 | 0.6 | 99.4 | 0.0 | 0.06 | 0.84 | 0.83 | 1.71 | 3.4 | 0.002 | 0.42 | 0.0 | 0.03 | 17.34 | 0.00 | 2.299 | 5.10 | 0.12 | 0.1 | 99.9 | 0.0 | 5.43 | 0.45 | 0.84 | 0.85 | 0.51 | 32760 | 4020 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DP5 | 27630 | 2023-08-15 | 2022-07-14 | 3.1 | 3.61 | 3.19 | 3.5 | 0.013 | 1.78 | 2.0 | 0.09 | 12.28 | 0.02 | 2.317 | 0.79 | 0.00 | 1.1 | 98.9 | 0.0 | -0.51 | 0.80 | 0.85 | 4.09 | 3.5 | 0.002 | 0.52 | 0.0 | 0.03 | 14.32 | 0.00 | 2.080 | 2.98 | 0.11 | 1.3 | 98.7 | 0.0 | 2.69 | 2.87 | 0.74 | 0.82 | 2.70 | 17772 | 1145 | 6 | 0 | 0 | 0 | 8908 | logfile |
✔ | 7U0i | 26260 | 2023-08-15 | 2022-02-18 | 2.6 | 3.16 | — | 3.0 | 0.012 | 0.86 | 10.0 | 0.05 | 26.95 | 0.01 | 2.074 | 14.30 | 1.56 | 3.9 | 96.0 | 0.1 | 0.00 | 0.85 | 0.87 | 3.19 | 2.9 | 0.003 | 0.53 | 0.0 | 0.03 | 27.53 | 0.00 | 2.064 | 23.04 | 2.59 | 4.4 | 95.6 | 0.0 | 1.64 | 0.32 | 0.81 | 0.85 | 3.26 | 18108 | 1368 | 14 | 298 | 0 | 0 | 1220 | logfile |