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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7NAT | 12247 | 2022-04-09 | 2021-01-25 | 3.59 | 4.72 | 3.68 | 2.6 | 0.009 | 0.84 | 6.0 | 0.05 | 15.98 | 0.02 | 0.616 | 27.68 | 0.00 | 7.4 | 92.6 | 0.0 | -3.28 | 0.90 | 0.81 | 0.72 | 2.5 | 0.006 | 0.82 | 2.0 | 0.03 | 16.41 | 0.01 | 1.528 | 27.76 | 0.19 | 4.1 | 95.9 | 0.0 | -1.00 | 0.72 | 0.92 | 0.87 | 0.59 | 50921 | 2562 | 25 | 1430 | 66 | 0 | 0 | logfile |
✔ | 7S4V | 24835 | 2022-04-05 | 2021-09-09 | 3.28 | 3.87 | — | 3.7 | 0.003 | 0.54 | 0.0 | 0.04 | 17.44 | 0.00 | 2.202 | 4.88 | 0.00 | 5.0 | 95.0 | 0.0 | -1.46 | 0.80 | 0.80 | 2.24 | 3.7 | 0.002 | 0.52 | 0.0 | 0.03 | 18.46 | 0.00 | 2.235 | 5.23 | 0.00 | 4.4 | 95.6 | 0.0 | -0.38 | 0.56 | 0.85 | 0.85 | 2.01 | 12215 | 1122 | 4 | 145 | 0 | 0 | 0 | logfile |
✔ | 3J89 | 6123 | 2022-04-04 | 2014-10-07 | 3.6 | 2.21 | — | 3.5 | 0.022 | 1.64 | 0.0 | 0.10 | 11.97 | 0.01 | 2.578 | 2.11 | 0.00 | 3.5 | 96.5 | 0.0 | -0.96 | 0.83 | 0.81 | 0.77 | 3.2 | 0.004 | 0.56 | 0.0 | 0.03 | 20.77 | 0.01 | 2.082 | 10.42 | 2.01 | 1.4 | 98.6 | 0.0 | 2.48 | 1.98 | 0.81 | 0.79 | 0.26 | 9025 | 551 | 19 | 0 | 0 | 0 | 4598 | logfile |
✔ | 6R23 | 4708 | 2022-04-04 | 2019-03-15 | 4.9 | 4.57 | — | 4.6 | 0.006 | 1.07 | 0.0 | 0.05 | 16.56 | 0.01 | 2.332 | 7.52 | 0.00 | 7.9 | 92.1 | 0.0 | -4.61 | 0.60 | 0.75 | — | 4.6 | 0.003 | 0.59 | 0.0 | 0.03 | 16.52 | 0.00 | 2.361 | 7.85 | 0.00 | 6.7 | 93.3 | 0.0 | 0.29 | 3.60 | 0.60 | 0.73 | — | 1518 | 182 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WAY | 32389 | 2022-04-05 | 2021-12-15 | 2.9 | 3.11 | — | 2.9 | 0.004 | 0.54 | 0.0 | 0.04 | 16.63 | 0.00 | 2.172 | 5.59 | 0.00 | 2.8 | 97.2 | 0.0 | 1.31 | 0.87 | 0.85 | 2.73 | 2.9 | 0.002 | 0.56 | 0.0 | 0.03 | 17.57 | 0.00 | 2.210 | 6.01 | 0.72 | 2.1 | 97.9 | 0.0 | 1.76 | 0.33 | 0.88 | 0.86 | 2.28 | 11453 | 960 | 4 | 175 | 0 | 0 | 0 | logfile |
✔ | 6MUP | 9251 | 2022-04-05 | 2018-10-23 | 3.5 | 3.90 | — | 3.8 | 0.013 | 1.19 | 1.0 | 0.06 | 25.79 | 0.01 | 1.379 | 7.59 | 1.08 | 10.3 | 89.2 | 0.5 | -6.36 | 0.61 | 0.61 | 2.67 | 3.8 | 0.003 | 0.68 | 0.0 | 0.03 | 26.66 | 0.00 | 2.120 | 11.50 | 0.20 | 7.9 | 92.1 | 0.0 | -1.78 | 0.79 | 0.73 | 0.78 | 1.02 | 15803 | 1224 | 14 | 294 | 0 | 0 | 0 | logfile |
✔ | 7LJ3 | 23388 | 2022-04-07 | 2021-01-28 | 2.9 | 2.92 | — | 3.4 | 0.005 | 0.72 | 0.0 | 0.04 | 17.12 | 0.00 | 1.041 | 27.61 | 3.30 | 3.6 | 96.0 | 0.4 | 0.29 | 0.10 | 0.23 | -0.14 | 2.9 | 0.010 | 0.89 | 0.0 | 0.03 | 19.65 | 0.01 | 1.899 | 9.09 | 4.21 | 5.0 | 94.9 | 0.2 | 2.05 | 1.40 | 0.22 | 0.78 | 1.86 | 25714 | 2564 | 12 | 225 | 0 | 0 | 0 | logfile |
✔ | 6MHX | 9121 | 2022-04-08 | 2018-09-18 | 4.0 | 4.20 | 3.97 | 4.1 | 0.004 | 0.67 | 0.0 | 0.04 | 7.56 | 0.00 | 2.077 | 6.96 | 0.30 | 3.1 | 96.9 | 0.0 | -2.52 | 0.77 | 0.76 | — | 4.0 | 0.003 | 0.54 | 0.0 | 0.03 | 12.08 | 0.00 | 1.951 | 10.47 | 0.00 | 5.2 | 94.8 | 0.0 | 2.22 | 0.98 | 0.78 | 0.78 | — | 31612 | 2436 | 4 | 0 | 0 | 0 | 14648 | logfile |
✔ | 5XYM | 6789 | 2022-04-07 | 2017-07-09 | 3.08 | 3.42 | — | 3.4 | 0.006 | 1.01 | 7.0 | 0.10 | 16.02 | 0.00 | 1.297 | 4.08 | 2.56 | 7.8 | 89.6 | 2.5 | -3.59 | 0.66 | 0.78 | 3.19 | 3.4 | 0.004 | 0.64 | 1.0 | 0.03 | 15.42 | 0.01 | 1.114 | 8.13 | 0.12 | 7.8 | 91.2 | 1.1 | -1.59 | 1.41 | 0.77 | 0.85 | 2.41 | 84069 | 3122 | 32 | 2781 | 146 | 0 | 0 | logfile |
✔ | 6E9Z | 9021 | 2022-04-08 | 2018-08-01 | 3.4 | 3.50 | — | 3.4 | 0.011 | 0.85 | 0.0 | 0.05 | 10.27 | 0.01 | 1.132 | 13.25 | 0.00 | 4.5 | 95.1 | 0.4 | -6.29 | 0.55 | 0.77 | 3.60 | 3.5 | 0.003 | 0.62 | 0.0 | 0.03 | 15.82 | 0.00 | 1.876 | 8.16 | 0.12 | 2.7 | 97.3 | 0.0 | 2.47 | 1.91 | 0.57 | 0.81 | 1.19 | 32652 | 2025 | 9 | 0 | 0 | 0 | 16830 | logfile |
✔ | 7oHT | 12908 | 2022-04-08 | 2021-05-11 | 4.7 | 6.83 | 4.99 | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 17.51 | 0.00 | 1.855 | 6.82 | 1.28 | 5.3 | 94.6 | 0.1 | 0.83 | 0.81 | 0.61 | — | 3.3 | 0.003 | 0.58 | 0.0 | 0.03 | 17.81 | 0.00 | 1.807 | 19.44 | 0.00 | 8.9 | 90.9 | 0.1 | -0.79 | 1.73 | 0.86 | 0.78 | — | 135365 | 5154 | 30 | 1618 | 3 | 0 | 59714 | logfile |
✔ | 6MEC | 9106 | 2022-04-06 | 2018-09-06 | 3.6 | 3.69 | — | 3.6 | 0.010 | 1.21 | 0.0 | 0.06 | 18.24 | 0.01 | 1.659 | 15.42 | 0.00 | 13.7 | 86.3 | 0.0 | -4.93 | 0.86 | 0.80 | 2.53 | 3.6 | 0.007 | 0.87 | 0.0 | 0.03 | 17.73 | 0.00 | 1.934 | 16.02 | 0.00 | 8.6 | 91.4 | 0.0 | -1.43 | 0.93 | 0.86 | 0.79 | 1.82 | 21276 | 414 | 5 | 832 | 52 | 0 | 0 | logfile |
✔ | 6SEG | 10155 | 2022-04-05 | 2019-07-30 | 3.1 | 3.19 | — | 3.2 | 0.006 | 0.86 | 0.0 | 0.05 | 27.88 | 0.01 | 2.283 | 3.10 | 0.00 | 1.3 | 98.7 | 0.0 | -3.47 | 0.66 | 0.79 | 3.38 | 3.2 | 0.004 | 0.60 | 0.0 | 0.03 | 29.04 | 0.00 | 2.004 | 8.06 | 0.17 | 1.5 | 98.5 | 0.0 | 1.18 | 0.37 | 0.67 | 0.81 | 2.48 | 11689 | 728 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 6G4S | 4348 | 2022-04-09 | 2018-03-28 | 4.0 | 4.37 | — | 3.9 | 0.005 | 1.05 | 0.0 | 0.07 | 21.38 | 0.01 | 1.911 | 1.77 | 0.00 | 8.6 | 91.2 | 0.2 | -3.72 | 0.72 | 0.69 | — | 3.9 | 0.004 | 0.71 | 0.0 | 0.03 | 21.09 | 0.00 | 2.009 | 7.98 | 0.00 | 11.6 | 88.4 | 0.0 | -0.68 | 2.10 | 0.81 | 0.73 | — | 48967 | 5224 | 33 | 1613 | 768 | 0 | 0 | logfile |
✔ | 7N3P | 24143 | 2022-04-04 | 2021-06-01 | 3.65 | 3.97 | — | 3.9 | 0.003 | 0.58 | 0.0 | 0.04 | 18.98 | 0.00 | 2.224 | 8.05 | 0.00 | 2.2 | 97.8 | 0.0 | 1.68 | 0.77 | 0.79 | 2.64 | 3.9 | 0.004 | 0.60 | 0.0 | 0.03 | 19.71 | 0.01 | 2.136 | 14.35 | 0.27 | 2.2 | 97.8 | 0.0 | 1.41 | 0.44 | 0.78 | 0.82 | 2.54 | 9055 | 454 | 4 | 259 | 0 | 0 | 0 | logfile |
✔ | 7AC7 | 11713 | 2022-04-16 | 2020-09-10 | 3.08 | 3.25 | 3.06 | 3.1 | 0.003 | 0.58 | 5.0 | 0.03 | 14.38 | 0.02 | 1.183 | 10.07 | 0.66 | 3.1 | 96.7 | 0.2 | -0.42 | 0.80 | 0.83 | 2.85 | 3.1 | 0.004 | 0.62 | 0.0 | 0.03 | 15.67 | 0.01 | 1.041 | 8.56 | 0.51 | 3.8 | 96.1 | 0.1 | -0.05 | 0.58 | 0.84 | 0.89 | 2.58 | 154883 | 5975 | 71 | 5017 | 443 | 0 | 0 | logfile |
✔ | 7ACR | 11718 | 2022-04-14 | 2020-09-11 | 3.44 | 3.72 | 3.11 | 2.6 | 0.003 | 0.69 | 21.0 | 0.04 | 15.48 | 0.02 | 0.444 | 14.05 | 1.77 | 5.3 | 94.3 | 0.4 | -1.02 | 0.87 | 0.78 | 1.12 | 2.6 | 0.005 | 0.71 | 0.0 | 0.03 | 16.76 | 0.01 | 1.197 | 17.92 | 0.58 | 7.3 | 92.6 | 0.1 | -1.40 | 1.23 | 0.89 | 0.84 | 1.26 | 151668 | 5858 | 66 | 4920 | 214 | 0 | 0 | logfile |
✔ | 5LZS | 4130 | 2022-04-22 | 2016-10-02 | 3.31 | 3.42 | 3.34 | 3.3 | 0.007 | 1.16 | 9.0 | 0.10 | 18.08 | 0.01 | 1.121 | 2.67 | 6.66 | 6.0 | 93.6 | 0.5 | -2.99 | 0.80 | 0.87 | 2.60 | 3.3 | 0.003 | 0.61 | 0.0 | 0.03 | 17.18 | 0.00 | 1.917 | 11.46 | 0.60 | 3.7 | 96.2 | 0.0 | -0.29 | 0.69 | 0.80 | 0.86 | 2.08 | 220934 | 12153 | 105 | 5748 | 285 | 0 | 0 | logfile |
✔ | 7S1G | 24800 | 2022-04-26 | 2021-09-02 | 2.48 | 3.04 | — | 2.9 | 0.004 | 0.38 | 0.0 | 0.03 | 14.28 | 0.01 | 1.320 | 3.75 | 0.80 | 2.4 | 97.6 | 0.1 | 1.41 | 0.75 | 0.86 | 3.21 | 2.9 | 0.003 | 0.57 | 0.0 | 0.03 | 15.33 | 0.01 | 1.808 | 5.74 | 2.12 | 3.5 | 96.5 | 0.1 | 0.64 | 0.89 | 0.76 | 0.88 | 3.18 | 240537 | 5661 | 66 | 4638 | 199 | 42 | 96399 | logfile |
✔ | 7AA5 | 11690 | 2022-04-06 | 2020-09-03 | 4.18 | 4.64 | — | 4.4 | 0.006 | 0.92 | 2.0 | 0.04 | 14.67 | 0.00 | 2.119 | 21.41 | 2.04 | 15.1 | 84.7 | 0.2 | -4.78 | 0.69 | 0.80 | — | 4.4 | 0.002 | 0.54 | 0.0 | 0.03 | 13.26 | 0.00 | 1.973 | 64.75 | 0.00 | 11.7 | 88.2 | 0.2 | -0.27 | 1.12 | 0.68 | 0.79 | — | 19705 | 2448 | 5 | 0 | 1 | 0 | 8 | logfile |