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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PBT | 13302 | 2023-02-27 | 2021-08-02 | 3.3 | 2.86 | 3.16 | 3.1 | 0.004 | 0.69 | 0.0 | 0.04 | 14.81 | 0.01 | 1.830 | 1.18 | 0.12 | 1.1 | 98.9 | 0.0 | -0.27 | 0.67 | 0.79 | 3.06 | 3.1 | 0.003 | 0.55 | 0.0 | 0.04 | 17.15 | 0.00 | 1.785 | 2.61 | 0.06 | 1.5 | 98.5 | 0.0 | 1.55 | 1.33 | 0.73 | 0.84 | 2.48 | 31318 | 1918 | 15 | 30 | 9 | 0 | 15439 | logfile |
✔ | 7TAN | 25777 | 2023-02-20 | 2021-12-21 | 3.0 | 2.95 | — | 3.1 | 0.003 | 0.47 | 0.0 | 0.03 | 27.32 | 0.00 | 2.287 | 3.25 | 0.00 | 2.8 | 97.2 | 0.0 | 2.18 | 0.82 | 0.85 | 2.22 | 3.1 | 0.004 | 0.51 | 0.0 | 0.03 | 27.86 | 0.00 | 2.221 | 2.61 | 0.78 | 2.0 | 98.0 | 0.0 | 2.33 | 0.33 | 0.83 | 0.87 | 2.17 | 12119 | 768 | 12 | 294 | 0 | 0 | 0 | logfile |
✔ | 7QL2 | 14061 | 2023-02-16 | 2021-12-19 | 2.95 | 2.96 | 2.65 | 3.1 | 0.010 | 2.11 | 2.0 | 0.11 | 10.98 | 0.01 | 2.674 | 0.00 | 0.00 | 7.6 | 92.4 | 0.0 | -2.82 | 0.30 | 0.74 | 4.50 | 3.5 | 0.003 | 0.58 | 0.0 | 0.05 | 12.52 | 0.00 | 2.497 | 2.63 | 1.48 | 8.3 | 91.7 | 0.0 | -3.27 | 1.13 | 0.22 | 0.72 | 4.36 | 2286 | 150 | 3 | 0 | 0 | 0 | 1179 | logfile |
✔ | 7NT6 | 12584 | 2023-02-25 | 2021-03-09 | 4.3 | 4.34 | 3.99 | 3.3 | 0.012 | 2.07 | 0.0 | 0.15 | 8.75 | 0.01 | 2.119 | 1.13 | 0.00 | 4.0 | 95.6 | 0.3 | -2.44 | 0.72 | 0.76 | — | 3.3 | 0.002 | 0.62 | 0.0 | 0.05 | 8.09 | 0.00 | 2.161 | 2.67 | 0.00 | 4.4 | 95.6 | 0.0 | 1.97 | 0.64 | 0.71 | 0.71 | — | 24128 | 5582 | 17 | 90 | 0 | 0 | 0 | logfile |
✔ | 7SoE | 25268 | 2023-02-25 | 2021-10-29 | 2.8 | 2.87 | 2.84 | 2.8 | 0.010 | 1.27 | 0.0 | 0.07 | 9.85 | 0.01 | 2.416 | 1.06 | 0.15 | 2.0 | 98.0 | 0.0 | 0.29 | 0.74 | 0.80 | 3.95 | 2.8 | 0.003 | 0.60 | 0.0 | 0.05 | 13.00 | 0.00 | 2.196 | 2.68 | 1.79 | 1.9 | 98.1 | 0.0 | 0.90 | 0.54 | 0.73 | 0.84 | 3.13 | 25947 | 3783 | 15 | 0 | 57 | 0 | 0 | logfile |
✔ | 6CUD | 7620 | 2023-02-23 | 2018-03-25 | 3.3 | 3.61 | — | 3.5 | 0.007 | 1.13 | 0.0 | 0.06 | 12.63 | 0.02 | 2.171 | 6.98 | 1.47 | 4.4 | 95.5 | 0.1 | -3.04 | 0.71 | 0.83 | 1.93 | 3.5 | 0.003 | 0.58 | 0.0 | 0.04 | 13.29 | 0.00 | 2.256 | 2.76 | 0.37 | 3.7 | 96.2 | 0.1 | 2.32 | 1.93 | 0.72 | 0.85 | 1.53 | 21028 | 2816 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 7USA | 26730 | 2023-02-25 | 2022-04-23 | 2.8 | 2.94 | 2.77 | 3.0 | 0.014 | 1.57 | 18.0 | 0.13 | 9.66 | 0.01 | 1.968 | 1.95 | 0.04 | 3.5 | 96.2 | 0.3 | 0.09 | 0.75 | 0.85 | 4.68 | 3.0 | 0.003 | 0.58 | 0.0 | 0.04 | 13.37 | 0.00 | 2.267 | 2.76 | 1.88 | 2.4 | 97.5 | 0.1 | 0.67 | 0.98 | 0.74 | 0.90 | 4.29 | 24307 | 3181 | 33 | 0 | 90 | 0 | 0 | logfile |
✔ | 7STo | 25435 | 2023-02-25 | 2021-11-14 | 3.15 | 3.45 | — | 3.3 | 0.007 | 0.82 | 0.0 | 0.04 | 10.39 | 0.00 | 2.289 | 1.13 | 0.15 | 2.3 | 97.7 | 0.0 | 1.91 | 0.68 | 0.82 | 3.05 | 3.3 | 0.003 | 0.46 | 0.0 | 0.04 | 12.87 | 0.00 | 2.194 | 2.76 | 0.15 | 3.1 | 96.7 | 0.1 | 1.88 | 1.23 | 0.70 | 0.86 | 2.74 | 25210 | 1580 | 4 | 0 | 10 | 0 | 12268 | logfile |
✔ | 7STL | 25432 | 2023-02-25 | 2021-11-14 | 2.95 | 3.30 | — | 3.2 | 0.004 | 0.75 | 0.0 | 0.04 | 10.31 | 0.00 | 2.190 | 0.38 | 0.15 | 2.3 | 97.7 | 0.0 | 1.82 | 0.67 | 0.82 | 3.24 | 3.2 | 0.004 | 0.48 | 0.0 | 0.04 | 13.91 | 0.00 | 2.104 | 2.76 | 0.59 | 3.5 | 96.3 | 0.1 | 1.65 | 0.57 | 0.66 | 0.84 | 3.21 | 25668 | 1600 | 4 | 0 | 8 | 0 | 12568 | logfile |
✔ | 7XTZ | 33453 | 2023-02-21 | 2022-05-18 | 2.8 | 2.99 | 2.73 | 2.9 | 0.012 | 0.86 | 0.0 | 0.05 | 13.31 | 0.00 | 2.204 | 0.77 | 0.42 | 3.2 | 96.8 | 0.0 | -0.29 | 0.83 | 0.84 | 4.09 | 2.9 | 0.003 | 0.48 | 0.0 | 0.04 | 14.16 | 0.00 | 2.041 | 2.79 | 0.80 | 3.0 | 97.0 | 0.0 | -0.04 | 0.30 | 0.83 | 0.86 | 3.83 | 51900 | 3291 | 21 | 0 | 75 | 0 | 25032 | logfile |
✔ | 7KPW | 22990 | 2023-02-17 | 2020-11-12 | 4.9 | 5.04 | 4.74 | 4.9 | 0.009 | 1.54 | 4.0 | 0.10 | 1.89 | 0.01 | 2.279 | 3.61 | 0.00 | 3.9 | 94.9 | 1.2 | 4.09 | 0.75 | 0.67 | — | 4.9 | 0.003 | 0.73 | 0.0 | 0.04 | 5.85 | 0.00 | 2.148 | 2.79 | 0.00 | 11.5 | 87.9 | 0.6 | -0.50 | 2.04 | 0.82 | 0.82 | — | 4313 | 865 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KoD | 22972 | 2023-02-26 | 2020-11-08 | 1.655 | 2.30 | — | 1.9 | 0.001 | 0.33 | 0.0 | 0.03 | 8.49 | 0.00 | 2.288 | 0.80 | 0.00 | 1.1 | 98.9 | 0.0 | 6.14 | 0.91 | 0.91 | 8.16 | 2.0 | 0.005 | 0.49 | 0.0 | 0.04 | 13.86 | 0.00 | 1.860 | 2.84 | 0.22 | 0.6 | 99.4 | 0.0 | 5.19 | 0.83 | 0.87 | 0.93 | 8.00 | 68186 | 4128 | 48 | 0 | 0 | 1727 | 32643 | logfile |
✔ | 7Q8C | 13864 | 2023-02-21 | 2021-11-11 | 2.72 | 2.78 | 2.67 | 2.7 | 0.005 | 0.62 | 0.0 | 0.05 | 10.88 | 0.00 | 1.953 | 1.76 | 0.00 | 3.0 | 97.0 | 0.0 | 0.25 | 0.73 | 0.89 | 5.04 | 2.7 | 0.003 | 0.64 | 0.0 | 0.05 | 15.05 | 0.00 | 1.803 | 2.86 | 1.42 | 3.4 | 96.6 | 0.0 | 0.20 | 0.89 | 0.73 | 0.91 | 4.28 | 14975 | 1850 | 15 | 0 | 10 | 360 | 0 | logfile |
✔ | 7PBS | 13301 | 2023-02-27 | 2021-08-02 | 3.3 | 2.55 | — | 3.2 | 0.005 | 0.71 | 0.0 | 0.05 | 14.69 | 0.01 | 1.778 | 1.66 | 0.25 | 0.7 | 99.3 | 0.0 | -0.18 | 0.65 | 0.77 | 3.13 | 3.2 | 0.003 | 0.54 | 0.0 | 0.04 | 17.25 | 0.00 | 1.779 | 2.87 | 0.06 | 1.8 | 98.2 | 0.0 | 1.48 | 1.33 | 0.71 | 0.82 | 2.45 | 31328 | 1918 | 15 | 30 | 11 | 0 | 15439 | logfile |
✔ | 6oVH | 20212 | 2023-02-19 | 2019-05-07 | 2.6 | 2.81 | 2.71 | 2.8 | 0.014 | 1.10 | 0.0 | 0.04 | 17.48 | 0.01 | 1.203 | 1.15 | 4.55 | 1.0 | 99.0 | 0.0 | -6.34 | 0.75 | 0.87 | 4.63 | 2.8 | 0.003 | 0.75 | 0.0 | 0.04 | 18.69 | 0.00 | 2.055 | 2.87 | 0.38 | 0.8 | 99.2 | 0.0 | 2.63 | 0.98 | 0.77 | 0.88 | 3.77 | 10895 | 1272 | 36 | 0 | 68 | 171 | 0 | logfile |
✔ | 7BKP | 12213 | 2023-02-20 | 2021-01-16 | 2.8 | 2.78 | 2.75 | 2.9 | 0.009 | 0.84 | 0.0 | 0.05 | 12.30 | 0.00 | 1.824 | 2.22 | 0.32 | 6.5 | 93.2 | 0.3 | -2.15 | 0.66 | 0.84 | 3.66 | 2.9 | 0.002 | 0.51 | 0.0 | 0.04 | 14.72 | 0.00 | 2.089 | 2.88 | 1.13 | 5.1 | 94.9 | 0.0 | 1.46 | 2.05 | 0.64 | 0.86 | 2.83 | 12118 | 689 | 4 | 28 | 3 | 0 | 5956 | logfile |
✔ | 7NPS | 12518 | 2023-02-22 | 2021-02-28 | 3.81 | 3.93 | 3.82 | 3.9 | 0.010 | 1.15 | 6.0 | 0.08 | 11.02 | 0.01 | 2.182 | 1.23 | 0.00 | 2.5 | 97.5 | 0.0 | -1.44 | 0.82 | 0.82 | 2.59 | 3.9 | 0.002 | 0.59 | 0.0 | 0.05 | 12.84 | 0.00 | 1.895 | 2.89 | 0.00 | 1.8 | 98.2 | 0.0 | -0.02 | 0.68 | 0.83 | 0.83 | 2.26 | 55350 | 3732 | 9 | 0 | 0 | 0 | 27681 | logfile |
✔ | 7PKB | 13467 | 2023-02-21 | 2021-08-25 | 3.2 | 2.68 | 3.08 | 3.1 | 0.008 | 0.90 | 0.0 | 0.14 | 13.28 | 0.01 | 1.950 | 3.97 | 0.00 | 5.1 | 94.8 | 0.1 | -0.98 | 0.72 | 0.85 | 5.32 | 3.2 | 0.003 | 0.70 | 0.0 | 0.14 | 13.54 | 0.00 | 2.127 | 2.91 | 0.00 | 3.4 | 96.6 | 0.0 | -0.34 | 0.58 | 0.73 | 0.87 | 4.70 | 16145 | 1030 | 15 | 0 | 10 | 5 | 7970 | logfile |
✔ | 7QK3 | 14030 | 2023-02-16 | 2021-12-17 | 2.44 | 2.73 | 2.35 | 2.7 | 0.010 | 2.07 | 0.0 | 0.11 | 12.55 | 0.01 | 2.519 | 0.00 | 0.00 | 3.4 | 96.6 | 0.0 | -3.04 | 0.38 | 0.77 | 5.65 | 2.7 | 0.003 | 0.72 | 0.0 | 0.05 | 16.27 | 0.00 | 2.309 | 2.92 | 0.64 | 2.8 | 97.2 | 0.0 | -2.78 | 2.36 | 0.39 | 0.82 | 5.18 | 2742 | 183 | 3 | 0 | 0 | 0 | 1407 | logfile |
✔ | 6WX6 | 21951 | 2023-02-26 | 2020-05-09 | 2.0 | 2.11 | 2.08 | 2.1 | 0.006 | 0.69 | 0.0 | 0.04 | 14.94 | 0.00 | 2.277 | 0.00 | 0.00 | 1.2 | 98.8 | 0.0 | 1.60 | 0.77 | 0.88 | 7.70 | 2.1 | 0.003 | 0.52 | 0.0 | 0.03 | 16.21 | 0.00 | 2.020 | 2.93 | 0.69 | 1.2 | 98.8 | 0.0 | 4.75 | 0.53 | 0.79 | 0.90 | 7.39 | 68332 | 4128 | 56 | 0 | 8 | 2420 | 32664 | logfile |