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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7QKY | 14057 | 2022-07-03 | 2021-12-19 | 1.86 | 2.10 | 1.91 | 2.0 | 0.011 | 1.75 | 3.0 | 0.09 | 12.76 | 0.01 | 2.522 | 1.04 | 0.61 | 4.7 | 95.3 | 0.0 | -3.08 | 0.33 | 0.75 | 8.32 | 2.0 | 0.003 | 0.69 | 0.0 | 0.05 | 16.56 | 0.00 | 2.218 | 4.85 | 0.61 | 6.2 | 93.8 | 0.0 | -3.18 | 1.00 | 0.40 | 0.84 | 7.35 | 5760 | 396 | 6 | 0 | 0 | 0 | 2862 | logfile |
✔ | 7EiB | 31145 | 2022-07-03 | 2021-03-30 | 3.0 | 2.24 | — | 2.0 | 0.005 | 0.86 | 0.0 | 0.05 | 12.65 | 0.01 | 2.306 | 3.66 | 0.27 | 2.0 | 98.0 | 0.0 | -0.34 | 0.74 | 0.75 | 3.17 | 2.0 | 0.004 | 0.66 | 0.0 | 0.04 | 16.05 | 0.01 | 2.110 | 10.62 | 1.61 | 2.2 | 97.8 | 0.0 | 1.18 | 1.20 | 0.74 | 0.77 | 1.92 | 7204 | 928 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WPA | 32680 | 2022-07-06 | 2022-01-23 | 2.77 | 2.26 | — | 2.1 | 0.003 | 0.76 | 2.0 | 0.05 | 14.12 | 0.01 | 2.327 | 3.44 | 0.45 | 5.4 | 94.5 | 0.0 | -4.08 | 0.72 | 0.73 | 2.35 | 2.0 | 0.005 | 0.70 | 0.0 | 0.05 | 16.69 | 0.01 | 2.180 | 9.60 | 2.78 | 5.8 | 94.1 | 0.1 | -1.52 | 0.65 | 0.76 | 0.80 | 2.87 | 30444 | 3774 | 20 | 0 | 47 | 0 | 0 | logfile |
✔ | 7RQS | 24635 | 2022-07-03 | 2021-08-07 | 3.57 | 2.31 | 3.59 | 2.0 | 0.002 | 0.54 | 0.0 | 0.04 | 13.38 | 0.00 | 2.088 | 9.94 | 0.26 | 7.6 | 92.4 | 0.0 | -0.91 | 0.70 | 0.68 | 2.53 | 2.0 | 0.003 | 0.63 | 0.0 | 0.04 | 15.66 | 0.01 | 1.982 | 12.21 | 0.53 | 9.4 | 90.5 | 0.1 | -1.03 | 0.59 | 0.70 | 0.69 | 2.57 | 7792 | 1074 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7JSX | 22462 | 2022-07-07 | 2020-08-16 | 2.06 | 2.05 | — | 2.1 | 0.022 | 1.67 | 2.0 | 0.11 | 11.97 | 0.01 | 2.201 | 6.88 | 1.26 | 3.9 | 96.1 | 0.0 | -1.03 | 0.74 | 0.76 | 5.10 | 2.0 | 0.012 | 1.10 | 0.0 | 0.04 | 14.60 | 0.00 | 2.135 | 9.41 | 0.80 | 2.4 | 97.6 | 0.0 | 1.01 | 0.64 | 0.82 | 0.89 | 6.51 | 38813 | 4832 | 40 | 0 | 0 | 1141 | 0 | logfile |
✔ | 6YL3 | 10835 | 2022-07-10 | 2020-04-06 | 1.98 | 2.04 | 1.99 | 2.0 | 0.067 | 3.60 | 246.0 | 0.36 | 16.35 | 0.02 | 1.877 | 4.58 | 2.74 | 5.3 | 94.4 | 0.4 | -2.46 | 0.78 | 0.83 | 6.40 | 2.0 | 0.006 | 0.81 | 0.0 | 0.05 | 16.29 | 0.01 | 1.664 | 5.82 | 1.62 | 4.1 | 95.8 | 0.1 | -0.24 | 0.52 | 0.81 | 0.86 | 7.07 | 150156 | 9552 | 84 | 0 | 24 | 3672 | 73044 | logfile |
✔ | 7VDA | 31912 | 2022-07-05 | 2021-09-06 | 2.26 | 2.04 | 2.42 | 2.1 | 0.003 | 0.53 | 0.0 | 0.04 | 17.67 | 0.00 | 2.142 | 8.23 | 2.20 | 2.6 | 97.4 | 0.0 | 1.67 | 0.66 | 0.82 | 4.06 | 2.0 | 0.003 | 0.60 | 0.0 | 0.04 | 18.09 | 0.00 | 2.073 | 9.24 | 3.21 | 2.5 | 97.5 | 0.0 | 0.92 | 0.42 | 0.66 | 0.83 | 4.25 | 23292 | 2976 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EZM | 31389 | 2022-07-03 | 2021-06-01 | 2.9 | 2.20 | — | 2.0 | 0.011 | 1.07 | 1.0 | 0.15 | 13.21 | 0.01 | 2.228 | 5.06 | 0.94 | 3.8 | 96.2 | 0.0 | -0.87 | 0.76 | 0.76 | 3.60 | 2.0 | 0.004 | 0.78 | 0.0 | 0.07 | 16.17 | 0.00 | 2.095 | 11.52 | 2.51 | 2.1 | 97.9 | 0.0 | 0.54 | 0.63 | 0.78 | 0.80 | 2.94 | 9008 | 1171 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QEQ | 13937 | 2022-07-04 | 2021-12-03 | 1.9 | 2.38 | 1.89 | 2.1 | 0.009 | 0.61 | 0.0 | 0.04 | 12.54 | 0.00 | 2.181 | 2.19 | 1.18 | 1.1 | 98.9 | 0.0 | 1.60 | 0.82 | 0.90 | 4.56 | 2.1 | 0.003 | 0.58 | 0.0 | 0.04 | 14.03 | 0.00 | 2.247 | 2.92 | 1.13 | 1.8 | 98.2 | 0.0 | 4.07 | 0.99 | 0.82 | 0.92 | 4.18 | 19313 | 2268 | 36 | 0 | 60 | 305 | 0 | logfile |
✔ | 7QEY | 13944 | 2022-07-03 | 2021-12-03 | 2.0 | 2.46 | — | 2.2 | 0.009 | 0.57 | 0.0 | 0.03 | 10.74 | 0.00 | 2.199 | 3.57 | 2.35 | 1.7 | 98.3 | 0.0 | 1.74 | 0.77 | 0.90 | 5.27 | 2.1 | 0.003 | 0.67 | 0.0 | 0.04 | 13.24 | 0.00 | 2.166 | 4.70 | 1.74 | 2.2 | 97.8 | 0.0 | 3.20 | 0.55 | 0.78 | 0.92 | 4.07 | 9467 | 1092 | 18 | 0 | 30 | 281 | 0 | logfile |
✔ | 6ZJA | 11233 | 2022-07-05 | 2020-06-28 | 2.0 | 2.10 | 2.09 | 2.1 | 0.006 | 0.86 | 0.0 | 0.06 | 14.19 | 0.01 | 1.974 | 0.84 | 1.37 | 4.1 | 95.9 | 0.0 | -0.40 | 0.79 | 0.87 | 6.97 | 2.1 | 0.004 | 0.72 | 0.0 | 0.05 | 15.95 | 0.01 | 1.820 | 1.85 | 0.56 | 4.3 | 95.7 | 0.0 | 0.02 | 0.39 | 0.78 | 0.89 | 6.77 | 77951 | 9684 | 60 | 0 | 36 | 3191 | 0 | logfile |
✔ | 7VXE | 32177 | 2022-07-08 | 2021-11-12 | 3.2 | 2.31 | — | 2.0 | 0.003 | 0.45 | 0.0 | 0.04 | 7.36 | 0.00 | 2.082 | 1.83 | 0.00 | 4.4 | 95.5 | 0.1 | -1.79 | 0.61 | 0.54 | 2.41 | 2.1 | 0.003 | 0.58 | 0.0 | 0.04 | 12.72 | 0.00 | 1.935 | 4.99 | 0.22 | 3.3 | 96.6 | 0.2 | -0.03 | 1.46 | 0.70 | 0.72 | 2.67 | 49296 | 3186 | 3 | 0 | 0 | 0 | 24366 | logfile |
✔ | 7F9Z | 31501 | 2022-07-03 | 2021-07-05 | 3.2 | 2.27 | — | 2.1 | 0.005 | 0.56 | 6.0 | 0.04 | 13.25 | 0.00 | 2.200 | 7.36 | 0.00 | 1.9 | 98.1 | 0.0 | 1.50 | 0.69 | 0.68 | 1.77 | 2.1 | 0.003 | 0.57 | 6.0 | 0.04 | 15.84 | 0.00 | 2.155 | 11.49 | 0.46 | 2.7 | 97.3 | 0.0 | 0.70 | 1.54 | 0.72 | 0.73 | 2.39 | 9981 | 1264 | 7 | 0 | 7 | 0 | 0 | logfile |
✔ | 6WWG | 21934 | 2022-07-04 | 2020-05-09 | 2.9 | 2.24 | 2.91 | 2.1 | 0.007 | 0.93 | 0.0 | 0.06 | 14.85 | 0.02 | 1.969 | 6.56 | 2.58 | 4.7 | 95.1 | 0.3 | -3.52 | 0.66 | 0.80 | 4.17 | 2.1 | 0.006 | 0.75 | 0.0 | 0.05 | 17.42 | 0.00 | 1.834 | 9.23 | 2.96 | 4.2 | 95.8 | 0.0 | -0.57 | 0.69 | 0.68 | 0.85 | 3.72 | 19749 | 2479 | 12 | 2 | 10 | 0 | 0 | logfile |
✔ | 7N1V | 24124 | 2022-07-05 | 2021-05-28 | 3.21 | 2.67 | — | 2.0 | 0.013 | 1.76 | 10.0 | 0.13 | 13.78 | 0.01 | 1.776 | 4.44 | 0.98 | 6.5 | 93.2 | 0.3 | -1.63 | 0.82 | 0.80 | 3.43 | 2.1 | 0.006 | 0.78 | 0.0 | 0.05 | 15.96 | 0.01 | 2.098 | 10.77 | 0.28 | 4.2 | 95.8 | 0.0 | -0.34 | 1.32 | 0.84 | 0.83 | 2.81 | 26947 | 3274 | 35 | 0 | 95 | 0 | 0 | logfile |
✔ | 7LVR | 23541 | 2022-07-03 | 2021-02-26 | 2.9 | 2.16 | 2.87 | 2.1 | 0.013 | 1.04 | 0.0 | 0.06 | 14.41 | 0.01 | 1.937 | 3.79 | 0.19 | 5.2 | 94.8 | 0.0 | -3.15 | 0.57 | 0.78 | 4.33 | 2.1 | 0.004 | 0.67 | 0.0 | 0.04 | 17.14 | 0.01 | 1.915 | 7.42 | 2.18 | 2.8 | 97.2 | 0.0 | -0.43 | 1.31 | 0.59 | 0.83 | 3.63 | 9802 | 1231 | 6 | 1 | 6 | 0 | 0 | logfile |
✔ | 7EZH | 31387 | 2022-07-03 | 2021-06-01 | 3.2 | 2.28 | — | 2.1 | 0.004 | 0.66 | 1.0 | 0.15 | 12.76 | 0.01 | 2.278 | 2.92 | 0.74 | 4.7 | 95.2 | 0.1 | -1.38 | 0.73 | 0.72 | 2.97 | 2.1 | 0.003 | 0.77 | 0.0 | 0.07 | 15.76 | 0.00 | 2.182 | 12.69 | 0.42 | 2.4 | 97.6 | 0.0 | 0.84 | 1.61 | 0.75 | 0.76 | 2.16 | 8838 | 1150 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SAG | 10130 | 2022-07-03 | 2019-07-16 | 2.0 | 2.11 | 2.01 | 2.1 | 0.004 | 0.65 | 0.0 | 0.04 | 12.99 | 0.00 | 0.351 | 2.79 | 0.00 | 2.6 | 97.4 | 0.0 | -0.33 | 0.58 | 0.86 | 6.64 | 2.1 | 0.004 | 0.63 | 0.0 | 0.04 | 15.40 | 0.01 | 2.054 | 3.11 | 1.17 | 3.1 | 96.9 | 0.0 | 1.56 | 0.73 | 0.60 | 0.89 | 6.90 | 54080 | 6120 | 240 | 120 | 240 | 2840 | 0 | logfile |
✔ | 6XEY | 22156 | 2022-07-06 | 2020-06-14 | 3.25 | 3.61 | 3.09 | 2.1 | 0.005 | 0.81 | 1.0 | 0.05 | 12.58 | 0.01 | 2.265 | 3.65 | 0.26 | 5.1 | 94.8 | 0.1 | -1.87 | 0.88 | 0.83 | 3.34 | 2.1 | 0.003 | 0.57 | 0.0 | 0.04 | 13.62 | 0.00 | 2.140 | 7.28 | 0.18 | 5.2 | 94.8 | 0.0 | -0.57 | 0.31 | 0.89 | 0.85 | 2.45 | 28482 | 3788 | 24 | 0 | 63 | 0 | 0 | logfile |
✔ | 6WWM | 21940 | 2022-07-03 | 2020-05-09 | 2.8 | 2.26 | 2.84 | 2.1 | 0.012 | 1.04 | 0.0 | 0.06 | 14.80 | 0.02 | 1.967 | 5.63 | 0.77 | 6.9 | 93.1 | 0.0 | -3.87 | 0.60 | 0.80 | 4.41 | 2.1 | 0.003 | 0.67 | 0.0 | 0.04 | 17.16 | 0.00 | 1.954 | 7.84 | 1.92 | 4.1 | 95.9 | 0.0 | -0.45 | 1.09 | 0.61 | 0.85 | 3.41 | 9664 | 1212 | 6 | 1 | 4 | 0 | 0 | logfile |