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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6PKV | 20367 | 2024-03-20 | 2019-06-30 | 4.3 | 4.49 | — | 4.3 | 0.005 | 0.86 | 0.0 | 0.05 | 8.98 | 0.01 | 2.311 | 3.51 | 0.00 | 4.7 | 95.3 | 0.0 | -3.45 | 0.67 | 0.78 | — | 4.3 | 0.003 | 0.59 | 0.0 | 0.04 | 9.97 | 0.00 | 2.214 | 8.15 | 0.00 | 4.8 | 95.2 | 0.0 | 1.13 | 1.93 | 0.67 | 0.78 | — | 28284 | 4260 | 4 | 0 | 88 | 0 | 0 | logfile |
✔ | 7UWD | 26829 | 2024-03-25 | 2022-05-03 | 4.1 | 4.40 | 4.24 | 2.3 | 0.006 | 0.78 | 1.0 | 0.05 | 10.38 | 0.00 | 2.218 | 5.49 | 1.17 | 5.1 | 94.7 | 0.2 | 1.93 | 0.77 | 0.74 | — | 2.1 | 0.003 | 0.56 | 0.0 | 0.04 | 9.98 | 0.00 | 2.144 | 6.89 | 0.00 | 5.5 | 94.4 | 0.1 | 2.25 | 0.38 | 0.83 | 0.85 | — | 46162 | 7772 | 31 | 0 | 56 | 0 | 0 | logfile |
✔ | 6oLM | 20117 | 2024-03-18 | 2019-04-16 | 4.4 | 5.29 | — | 4.3 | 0.012 | 1.28 | 0.0 | 0.06 | 10.91 | 0.01 | 2.397 | 0.92 | 0.00 | 2.0 | 98.0 | 0.0 | -0.33 | 0.89 | 0.79 | — | 4.3 | 0.003 | 0.67 | 0.0 | 0.04 | 9.99 | 0.00 | 2.202 | 11.40 | 0.00 | 7.0 | 93.0 | 0.0 | -0.76 | 1.58 | 0.87 | 0.68 | — | 10602 | 2112 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 6WBi | 21590 | 2024-03-15 | 2020-03-26 | 4.39 | 4.98 | — | 3.3 | 0.015 | 0.91 | 0.0 | 0.04 | 10.97 | 0.01 | 2.117 | 12.12 | 1.00 | 4.8 | 95.1 | 0.0 | -0.82 | 0.70 | 0.80 | — | 3.3 | 0.003 | 0.63 | 0.0 | 0.04 | 10.03 | 0.00 | 2.158 | 7.72 | 0.00 | 4.1 | 95.9 | 0.0 | 3.23 | 0.53 | 0.72 | 0.84 | — | 13018 | 2284 | 8 | 0 | 1 | 0 | 0 | logfile |
✔ | 8AA4 | 15293 | 2024-03-16 | 2022-06-29 | 3.1 | 3.54 | 2.92 | 3.2 | 0.001 | 0.41 | 0.0 | 0.04 | 7.46 | 0.00 | 2.240 | 3.52 | 0.00 | 2.7 | 97.2 | 0.1 | 0.39 | 0.73 | 0.88 | 4.17 | 3.2 | 0.003 | 0.53 | 0.0 | 0.04 | 10.05 | 0.00 | 2.112 | 4.01 | 0.20 | 3.5 | 96.4 | 0.1 | 0.00 | 0.93 | 0.73 | 0.89 | 3.87 | 13616 | 1742 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UW9 | 26825 | 2024-03-25 | 2022-05-03 | 4.2 | 4.40 | 4.30 | 2.2 | 0.003 | 0.62 | 2.0 | 0.04 | 10.30 | 0.00 | 2.207 | 7.60 | 1.21 | 3.9 | 96.0 | 0.1 | 2.14 | 0.79 | 0.78 | — | 2.1 | 0.002 | 0.54 | 0.0 | 0.04 | 10.11 | 0.00 | 2.148 | 7.79 | 0.00 | 4.5 | 95.5 | 0.1 | 2.29 | 1.67 | 0.80 | 0.79 | — | 46156 | 7764 | 31 | 0 | 56 | 0 | 0 | logfile |
✔ | 7UWA | 26826 | 2024-03-25 | 2022-05-03 | 4.3 | 4.39 | 4.41 | 2.3 | 0.003 | 0.61 | 1.0 | 0.04 | 10.20 | 0.00 | 2.202 | 7.93 | 1.05 | 3.8 | 96.1 | 0.0 | 2.06 | 0.79 | 0.79 | — | 2.1 | 0.004 | 0.58 | 0.0 | 0.04 | 10.13 | 0.00 | 2.120 | 9.04 | 0.00 | 5.7 | 94.3 | 0.0 | 2.06 | 1.63 | 0.82 | 0.83 | — | 46194 | 7772 | 31 | 0 | 56 | 0 | 0 | logfile |
✔ | 5V4S | 8633 | 2024-03-15 | 2017-03-10 | 4.2 | 7.95 | — | 4.2 | 0.012 | 1.56 | 20.0 | 0.14 | 8.80 | 0.01 | 2.352 | 3.29 | 0.00 | 6.6 | 93.1 | 0.3 | -1.95 | 0.55 | 0.60 | — | 4.2 | 0.003 | 0.61 | 0.0 | 0.04 | 10.17 | 0.00 | 2.195 | 12.66 | 0.00 | 2.5 | 97.5 | 0.0 | 2.96 | 0.84 | 0.62 | 0.70 | — | 10756 | 1548 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8BHM | 16060 | 2024-03-20 | 2022-10-31 | 2.95 | 3.91 | 2.95 | 3.5 | 0.003 | 0.91 | 0.0 | 0.04 | 6.75 | 0.00 | 2.258 | 1.80 | 0.00 | 0.9 | 99.1 | 0.0 | 2.44 | 0.76 | 0.84 | 4.06 | 3.5 | 0.002 | 0.53 | 0.0 | 0.04 | 10.20 | 0.00 | 2.068 | 4.80 | 0.54 | 1.7 | 98.3 | 0.0 | 2.38 | 0.70 | 0.74 | 0.81 | 4.05 | 27180 | 1680 | 10 | 0 | 10 | 0 | 13415 | logfile |
✔ | 7DCC | 30635 | 2024-03-23 | 2020-10-24 | 4.3 | 4.77 | — | 4.1 | 0.002 | 0.48 | 0.0 | 0.04 | 7.38 | 0.00 | 2.279 | 3.10 | 1.39 | 2.3 | 97.7 | 0.0 | -4.06 | 0.73 | 0.56 | — | 4.3 | 0.003 | 0.66 | 0.0 | 0.04 | 10.36 | 0.00 | 2.117 | 14.60 | 0.03 | 4.0 | 96.0 | 0.0 | -1.59 | 2.55 | 0.77 | 0.67 | — | 35019 | 4485 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 6MZJ | 9303 | 2024-03-15 | 2018-11-05 | 4.8 | 5.06 | — | 4.4 | 0.015 | 1.59 | 0.0 | 0.09 | 20.35 | 0.00 | 2.352 | 1.32 | 2.65 | 3.2 | 96.6 | 0.1 | -0.18 | 0.70 | 0.72 | — | 4.5 | 0.005 | 1.04 | 0.0 | 0.05 | 10.39 | 0.00 | 2.149 | 9.01 | 0.00 | 12.3 | 87.6 | 0.1 | -2.06 | 2.22 | 0.77 | 0.66 | — | 12653 | 2088 | 52 | 0 | 149 | 0 | 0 | logfile |
✔ | 6PSN | 20459 | 2024-03-22 | 2019-07-12 | 4.6 | 4.92 | — | 4.6 | 0.006 | 0.93 | 0.0 | 0.06 | 9.42 | 0.01 | 2.107 | 7.18 | 0.65 | 3.2 | 96.8 | 0.0 | -1.98 | 0.81 | 0.80 | — | 4.6 | 0.003 | 0.62 | 0.0 | 0.04 | 10.42 | 0.00 | 2.077 | 14.26 | 0.00 | 4.7 | 95.3 | 0.0 | -0.13 | 2.25 | 0.81 | 0.78 | — | 32830 | 4154 | 15 | 0 | 14 | 0 | 0 | logfile |
✔ | 5LiJ | 4054 | 2024-03-10 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.64 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.005 | 1.17 | 0.0 | 0.04 | 10.44 | 0.00 | 2.149 | 15.78 | 0.00 | 35.3 | 64.7 | 0.0 | -5.53 | 1.48 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DZL | 8935 | 2024-03-15 | 2018-07-05 | 4.14 | 4.55 | — | 4.2 | 0.012 | 0.95 | 0.0 | 0.08 | 11.39 | 0.01 | 2.069 | 6.05 | 0.23 | 12.7 | 87.3 | 0.0 | -4.57 | 0.78 | 0.84 | — | 4.2 | 0.003 | 0.65 | 0.0 | 0.04 | 10.44 | 0.00 | 2.325 | 11.02 | 0.00 | 8.2 | 91.8 | 0.0 | -1.48 | 1.44 | 0.78 | 0.86 | — | 12693 | 1587 | 21 | 0 | 30 | 0 | 0 | logfile |
✔ | 6i26 | 0328 | 2024-03-19 | 2018-10-31 | 4.3 | 4.37 | — | 4.2 | 0.005 | 0.89 | 0.0 | 0.05 | 8.22 | 0.01 | 0.411 | 6.12 | 0.50 | 6.4 | 93.3 | 0.3 | -6.25 | 0.75 | 0.60 | — | 4.2 | 0.004 | 0.72 | 0.0 | 0.04 | 10.44 | 0.00 | 2.206 | 7.12 | 0.00 | 7.5 | 92.4 | 0.1 | -0.07 | 0.98 | 0.84 | 0.77 | — | 22765 | 3366 | 1 | 0 | 221 | 0 | 0 | logfile |
✔ | 5A6E | 3062 | 2024-03-15 | 2015-06-25 | 4.5 | 6.76 | — | 5.1 | 0.010 | 3.73 | 0.0 | 0.05 | 15.55 | 0.01 | 2.112 | 8.77 | 3.19 | 11.1 | 88.8 | 0.2 | -5.00 | 0.36 | 0.56 | — | 4.8 | 0.003 | 0.57 | 0.0 | 0.03 | 10.45 | 0.00 | 2.097 | 10.54 | 0.00 | 5.1 | 94.9 | 0.0 | -0.33 | 1.45 | 0.40 | 0.72 | — | 11093 | 634 | 4 | 0 | 182 | 0 | 5102 | logfile |
✔ | 6oT2 | 20192 | 2024-03-22 | 2019-05-02 | 4.1 | 4.25 | 4.02 | 4.1 | 0.009 | 0.87 | 0.0 | 0.05 | 8.41 | 0.01 | 2.066 | 6.19 | 0.00 | 7.3 | 92.7 | 0.0 | -2.26 | 0.71 | 0.76 | — | 4.1 | 0.002 | 0.52 | 0.0 | 0.03 | 10.48 | 0.00 | 2.063 | 7.42 | 0.00 | 5.1 | 94.9 | 0.0 | 1.82 | 1.72 | 0.70 | 0.76 | — | 32311 | 2444 | 4 | 0 | 56 | 0 | 14975 | logfile |
✔ | 5oH0 | 3809 | 2024-03-11 | 2017-07-13 | 4.2 | 4.36 | — | 4.3 | 0.003 | 0.75 | 0.0 | 0.05 | 8.94 | 0.00 | 2.295 | 3.32 | 0.00 | 1.9 | 98.1 | 0.0 | -3.74 | 0.64 | 0.84 | — | 4.2 | 0.002 | 0.50 | 0.0 | 0.04 | 10.49 | 0.00 | 2.250 | 5.18 | 0.00 | 1.4 | 98.6 | 0.0 | -1.72 | 0.61 | 0.64 | 0.86 | — | 6588 | 942 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CS2 | 7582 | 2024-03-20 | 2018-03-19 | 4.4 | 4.80 | 4.54 | 4.3 | 0.007 | 0.97 | 0.0 | 0.06 | 15.29 | 0.01 | 1.972 | 7.62 | 0.24 | 7.0 | 92.9 | 0.1 | -3.98 | 0.85 | 0.82 | — | 4.3 | 0.003 | 0.68 | 0.0 | 0.04 | 10.50 | 0.00 | 2.047 | 12.94 | 0.00 | 5.7 | 94.3 | 0.0 | -1.53 | 1.23 | 0.85 | 0.83 | — | 27858 | 3404 | 34 | 0 | 91 | 0 | 0 | logfile |
✔ | 6NB7 | 0404 | 2024-03-19 | 2018-12-06 | 4.5 | 4.89 | — | 4.6 | 0.016 | 1.50 | 1.0 | 0.10 | 19.26 | 0.01 | 2.330 | 0.87 | 0.97 | 3.2 | 96.6 | 0.2 | 0.24 | 0.80 | 0.71 | — | 4.6 | 0.003 | 0.78 | 0.0 | 0.05 | 10.54 | 0.00 | 2.140 | 7.19 | 0.00 | 4.9 | 95.0 | 0.0 | -0.42 | 0.90 | 0.83 | 0.78 | — | 24718 | 3828 | 49 | 0 | 137 | 0 | 0 | logfile |