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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6DJP | 7939 | 2024-03-11 | 2018-05-25 | 4.8 | 5.02 | — | 4.8 | 0.012 | 2.01 | 0.0 | 0.08 | 11.31 | 0.01 | 2.368 | 0.45 | 0.00 | 4.6 | 95.4 | 0.0 | -0.74 | 0.76 | 0.65 | — | 4.8 | 0.007 | 1.19 | 0.0 | 0.05 | 10.55 | 0.01 | 2.168 | 17.65 | 0.00 | 23.0 | 76.9 | 0.1 | -4.03 | 1.19 | 0.82 | 0.76 | — | 7307 | 1393 | 16 | 0 | 23 | 0 | 0 | logfile |
✔ | 7LH3 | 23335 | 2024-03-15 | 2021-01-21 | 4.3 | 4.87 | — | 4.6 | 0.001 | 0.40 | 0.0 | 0.04 | 7.88 | 0.00 | 2.258 | 4.71 | 1.06 | 1.8 | 98.2 | 0.0 | 2.29 | 0.61 | 0.73 | — | 4.6 | 0.003 | 0.61 | 0.0 | 0.04 | 10.57 | 0.00 | 2.271 | 9.94 | 0.00 | 2.4 | 97.6 | 0.0 | 1.82 | 1.10 | 0.63 | 0.82 | — | 10452 | 1360 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QCY | 4513 | 2024-03-18 | 2018-12-31 | 4.7 | 4.78 | 5.41 | 4.7 | 0.009 | 1.05 | 0.0 | 0.05 | 9.70 | 0.01 | 2.012 | 8.28 | 0.00 | 14.0 | 86.0 | 0.0 | -4.43 | 0.50 | 0.63 | — | 4.7 | 0.002 | 0.61 | 0.0 | 0.04 | 10.59 | 0.00 | 1.928 | 8.88 | 0.00 | 7.0 | 93.0 | 0.0 | -1.34 | 2.14 | 0.49 | 0.63 | — | 21746 | 1420 | 6 | 0 | 2 | 0 | 11100 | logfile |
✔ | 3JBR | 6475 | 2024-03-17 | 2015-09-29 | 4.2 | 4.39 | — | 4.2 | 0.009 | 1.31 | 0.0 | 0.06 | 11.09 | 0.00 | 1.419 | 19.19 | 0.37 | 8.1 | 84.8 | 7.0 | -3.43 | 0.66 | 0.70 | — | 4.2 | 0.004 | 0.75 | 0.0 | 0.04 | 10.62 | 0.00 | 2.119 | 14.52 | 0.00 | 11.4 | 86.4 | 2.2 | -0.66 | 1.53 | 0.66 | 0.71 | — | 16467 | 2148 | 6 | 0 | 385 | 0 | 0 | logfile |
✔ | 6AYG | 7020 | 2024-03-15 | 2017-09-08 | 4.65 | 4.76 | — | 4.6 | 0.013 | 1.56 | 0.0 | 0.07 | 11.75 | 0.01 | 2.180 | 19.94 | 1.09 | 7.7 | 91.9 | 0.5 | -4.34 | 0.84 | 0.80 | — | 4.6 | 0.003 | 0.60 | 0.0 | 0.04 | 10.63 | 0.00 | 2.162 | 4.19 | 0.00 | 3.6 | 96.4 | 0.0 | 2.60 | 0.83 | 0.83 | 0.79 | — | 10456 | 1756 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E99 | 27961 | 2024-03-17 | 2022-08-26 | 4.24 | 4.70 | 4.27 | 4.5 | 0.004 | 0.82 | 2.0 | 0.05 | 11.61 | 0.01 | 1.579 | 8.15 | 0.30 | 7.4 | 92.2 | 0.3 | -1.79 | 0.73 | 0.75 | — | 4.5 | 0.003 | 0.67 | 0.0 | 0.04 | 10.67 | 0.00 | 2.215 | 5.99 | 0.00 | 7.4 | 92.4 | 0.2 | -1.11 | 0.46 | 0.74 | 0.77 | — | 17583 | 2710 | 11 | 0 | 10 | 0 | 0 | logfile |
✔ | 7LRD | 23495 | 2024-03-16 | 2021-02-16 | 3.22 | 4.04 | 3.18 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 7.75 | 0.00 | 1.795 | 4.48 | 0.25 | 1.3 | 98.7 | 0.0 | 2.71 | 0.82 | 0.76 | 2.88 | 3.3 | 0.007 | 0.65 | 0.0 | 0.04 | 10.70 | 0.00 | 1.940 | 9.27 | 0.89 | 2.6 | 97.4 | 0.0 | 2.22 | 1.19 | 0.90 | 0.88 | 2.73 | 14346 | 1766 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8ARi | 15603 | 2024-03-12 | 2022-08-16 | 3.0 | 3.68 | 3.06 | 3.4 | 0.003 | 0.50 | 0.0 | 0.04 | 9.10 | 0.00 | 2.254 | 2.40 | 0.38 | 4.2 | 95.7 | 0.1 | -0.94 | 0.89 | 0.88 | 4.79 | 3.4 | 0.002 | 0.44 | 0.0 | 0.04 | 10.74 | 0.00 | 2.116 | 2.33 | 0.33 | 3.0 | 97.0 | 0.0 | 0.25 | 0.95 | 0.86 | 0.91 | 3.43 | 63756 | 8160 | 58 | 0 | 24 | 0 | 0 | logfile |
✔ | 7CZ6 | 30507 | 2024-03-10 | 2020-09-07 | 4.1 | 4.04 | — | 4.1 | 0.009 | 1.62 | 0.0 | 0.05 | 8.57 | 0.01 | 1.047 | 61.25 | 0.00 | 8.1 | 91.9 | 0.0 | -1.66 | 0.68 | 0.64 | — | 4.1 | 0.005 | 0.85 | 0.0 | 0.05 | 10.75 | 0.01 | 2.091 | 14.92 | 0.00 | 6.6 | 93.4 | 0.0 | -2.16 | 0.90 | 0.66 | 0.74 | — | 4535 | 630 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UP7 | 20836 | 2024-03-10 | 2019-10-16 | 4.2 | 4.33 | — | 4.2 | 0.008 | 1.08 | 0.0 | 0.06 | 10.47 | 0.01 | 2.216 | 9.73 | 0.00 | 13.2 | 86.8 | 0.0 | -5.14 | 0.79 | 0.80 | — | 4.2 | 0.003 | 0.66 | 0.0 | 0.04 | 10.77 | 0.00 | 2.186 | 7.89 | 0.00 | 8.4 | 91.6 | 0.0 | -1.28 | 1.20 | 0.78 | 0.79 | — | 4166 | 676 | 5 | 0 | 10 | 0 | 0 | logfile |
✔ | 5A6F | 3063 | 2024-03-14 | 2015-06-25 | 4.2 | 5.75 | — | 5.0 | 0.012 | 1.50 | 0.0 | 0.05 | 12.32 | 0.01 | 2.112 | 10.08 | 3.74 | 12.2 | 87.6 | 0.2 | -4.94 | 0.56 | 0.74 | — | 4.8 | 0.002 | 0.56 | 0.0 | 0.04 | 10.77 | 0.00 | 2.024 | 10.19 | 0.00 | 5.8 | 94.2 | 0.0 | -0.80 | 1.43 | 0.58 | 0.75 | — | 8881 | 540 | 2 | 0 | 43 | 0 | 4330 | logfile |
✔ | 7WoG | 32651 | 2024-03-10 | 2022-01-21 | 4.06 | 2.95 | — | 2.0 | 0.001 | 0.41 | 0.0 | 0.04 | 8.09 | 0.00 | 2.293 | 10.22 | 3.78 | 8.0 | 92.0 | 0.0 | -3.98 | 0.51 | 0.51 | — | 2.2 | 0.003 | 0.72 | 0.0 | 0.04 | 10.77 | 0.00 | 2.076 | 19.52 | 0.00 | 12.4 | 87.6 | 0.0 | -2.57 | 0.92 | 0.54 | 0.54 | — | 3362 | 433 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R9o | 24330 | 2024-03-11 | 2021-06-29 | 4.0 | 4.66 | — | 4.0 | 0.002 | 0.38 | 0.0 | 0.04 | 4.49 | 0.00 | 2.252 | 2.85 | 0.25 | 10.5 | 88.7 | 0.8 | -4.93 | 0.83 | 0.71 | — | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 10.79 | 0.00 | 1.908 | 12.95 | 0.98 | 4.0 | 96.0 | 0.0 | -0.49 | 3.44 | 0.88 | 0.83 | — | 7726 | 505 | 1 | 0 | 0 | 0 | 3938 | logfile |
✔ | 6QD2 | 4517 | 2024-03-18 | 2018-12-31 | 4.8 | 4.92 | 5.85 | 4.9 | 0.006 | 0.86 | 0.0 | 0.04 | 9.04 | 0.01 | 2.025 | 6.53 | 0.00 | 11.6 | 88.4 | 0.0 | -4.60 | 0.35 | 0.62 | — | 4.9 | 0.004 | 0.70 | 0.0 | 0.04 | 10.80 | 0.01 | 2.038 | 14.21 | 0.00 | 10.0 | 90.0 | 0.0 | -2.07 | 1.11 | 0.39 | 0.66 | — | 21746 | 1420 | 5 | 0 | 2 | 0 | 11100 | logfile |
✔ | 7MJQ | 23882 | 2024-03-16 | 2021-04-20 | 4.2 | 4.29 | — | 4.2 | 0.009 | 1.55 | 0.0 | 0.15 | 11.99 | 0.01 | 1.552 | 6.01 | 0.00 | 9.4 | 90.6 | 0.0 | -1.25 | 0.52 | 0.66 | — | 4.2 | 0.004 | 0.86 | 0.0 | 0.05 | 10.81 | 0.00 | 2.153 | 3.53 | 0.00 | 17.7 | 82.2 | 0.0 | -2.65 | 1.83 | 0.60 | 0.76 | — | 14976 | 2982 | 13 | 0 | 10 | 0 | 0 | logfile |
✔ | 7MVV | 24057 | 2024-03-19 | 2021-05-15 | 3.22 | 4.20 | 3.24 | 3.5 | 0.002 | 0.36 | 0.0 | 0.03 | 6.43 | 0.00 | 2.161 | 3.07 | 0.07 | 1.3 | 98.7 | 0.0 | -0.66 | 0.88 | 0.76 | 0.50 | 3.5 | 0.002 | 0.50 | 0.0 | 0.03 | 10.83 | 0.00 | 2.039 | 6.48 | 0.43 | 2.7 | 97.3 | 0.0 | 3.22 | 0.92 | 0.89 | 0.81 | 1.07 | 25764 | 1609 | 4 | 0 | 0 | 0 | 12907 | logfile |
✔ | 5YFP | 6827 | 2024-03-22 | 2017-09-21 | 4.4 | 8.20 | — | 6.7 | 0.006 | 1.35 | 0.0 | 0.06 | 12.26 | 0.01 | 2.215 | 16.92 | 0.10 | 17.8 | 81.5 | 0.7 | -6.11 | 0.83 | 0.34 | — | 5.5 | 0.004 | 1.01 | 0.0 | 0.05 | 10.83 | 0.00 | 2.033 | 24.83 | 0.10 | 16.3 | 83.5 | 0.2 | -2.27 | 3.38 | 0.90 | 0.70 | — | 33096 | 5982 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 8AWT | 15696 | 2024-03-10 | 2022-08-30 | 3.0 | 3.11 | 2.92 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 9.30 | 0.00 | 2.671 | 4.07 | 0.00 | 0.0 | 100.0 | 0.0 | -4.11 | 0.52 | 0.86 | 6.78 | 3.1 | 0.004 | 0.53 | 0.0 | 0.04 | 10.85 | 0.00 | 2.622 | 0.27 | 0.00 | 1.2 | 98.8 | 0.0 | -3.86 | 1.01 | 0.53 | 0.89 | 6.82 | 1910 | 260 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 5VoT | 8721 | 2024-03-17 | 2017-05-03 | 4.9 | 4.98 | — | 4.9 | 0.004 | 0.67 | 0.0 | 0.04 | 7.57 | 0.00 | 2.126 | 11.91 | 0.00 | 8.5 | 91.5 | 0.0 | -4.03 | 0.63 | 0.71 | — | 4.9 | 0.003 | 0.70 | 0.0 | 0.04 | 10.85 | 0.00 | 2.167 | 13.62 | 0.00 | 5.4 | 94.6 | 0.0 | 0.29 | 0.85 | 0.65 | 0.80 | — | 16463 | 2322 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KiP | 22889 | 2024-03-21 | 2020-10-24 | 3.39 | 4.00 | 3.47 | 3.9 | 0.010 | 1.07 | 0.0 | 0.07 | 16.52 | 0.01 | 2.290 | 1.86 | 0.00 | 7.9 | 92.1 | 0.1 | -4.05 | 0.83 | 0.84 | 3.42 | 3.9 | 0.004 | 0.65 | 0.0 | 0.05 | 10.86 | 0.00 | 2.185 | 3.94 | 1.21 | 7.6 | 92.4 | 0.0 | -1.48 | 0.58 | 0.85 | 0.87 | 2.83 | 30612 | 3576 | 69 | 0 | 222 | 0 | 0 | logfile |