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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Y5G | 33619 | 2023-12-07 | 2022-06-17 | 3.85 | 4.19 | 3.81 | 4.2 | 0.002 | 0.43 | 0.0 | 0.04 | 12.74 | 0.00 | 2.084 | 2.19 | 0.00 | 0.7 | 99.3 | 0.0 | -0.05 | 0.63 | 0.72 | 1.21 | 4.1 | 0.002 | 0.53 | 0.0 | 0.04 | 15.35 | 0.00 | 2.030 | 5.10 | 0.38 | 1.0 | 99.0 | 0.0 | 1.53 | 0.65 | 0.65 | 0.75 | 0.28 | 4736 | 604 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 6PMJ | 20395 | 2023-12-08 | 2019-07-02 | 3.91 | 5.34 | — | 4.4 | 0.011 | 1.21 | 0.0 | 0.06 | 16.10 | 0.01 | 2.011 | 11.04 | 0.31 | 10.4 | 89.3 | 0.3 | -4.41 | 0.67 | 0.43 | 0.20 | 4.4 | 0.003 | 0.69 | 0.0 | 0.04 | 17.61 | 0.00 | 1.828 | 19.05 | 0.27 | 7.6 | 92.3 | 0.1 | -1.97 | 1.65 | 0.89 | 0.77 | 0.28 | 57984 | 3453 | 10 | 110 | 4 | 0 | 28609 | logfile |
✔ | 6XWQ | 10635 | 2023-12-09 | 2020-01-24 | 3.41 | 4.27 | — | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 13.42 | 0.00 | 2.171 | 10.53 | 0.00 | 3.5 | 96.2 | 0.2 | -2.80 | 0.73 | 0.80 | 0.22 | 4.0 | 0.003 | 0.80 | 0.0 | 0.04 | 15.44 | 0.00 | 2.167 | 14.27 | 0.30 | 3.8 | 96.2 | 0.0 | 1.16 | 1.16 | 0.72 | 0.84 | 0.30 | 9572 | 1281 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UNK | 26625 | 2023-12-10 | 2022-04-11 | 3.45 | 3.69 | 3.50 | 3.6 | 0.003 | 0.66 | 0.0 | 0.04 | 15.44 | 0.01 | 2.169 | 7.74 | 0.75 | 3.0 | 97.0 | 0.0 | 1.09 | 0.72 | 0.83 | 0.68 | 3.6 | 0.003 | 0.63 | 0.0 | 0.04 | 16.91 | 0.00 | 2.175 | 8.87 | 0.42 | 2.9 | 97.1 | 0.0 | 1.47 | 0.49 | 0.76 | 0.88 | 0.31 | 10992 | 1401 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RX0 | 24721 | 2023-12-09 | 2021-08-20 | 3.89 | 4.63 | — | 4.5 | 0.006 | 0.85 | 1.0 | 0.05 | 15.61 | 0.00 | 1.666 | 29.17 | 0.00 | 7.1 | 92.9 | 0.0 | -2.61 | 0.60 | 0.82 | 0.77 | 4.5 | 0.004 | 0.85 | 0.0 | 0.04 | 17.11 | 0.00 | 1.972 | 23.36 | 1.01 | 6.0 | 94.0 | 0.0 | -0.67 | 2.73 | 0.58 | 0.82 | 0.31 | 9673 | 1182 | 7 | 0 | 83 | 0 | 0 | logfile |
✔ | 7QPG | 14120 | 2023-12-08 | 2022-01-04 | 3.9 | 4.08 | — | 2.8 | 0.002 | 0.54 | 0.0 | 0.04 | 10.05 | 0.00 | 2.093 | 6.89 | 0.00 | 2.7 | 97.3 | 0.0 | 0.34 | 0.78 | 0.58 | 0.22 | 2.3 | 0.003 | 0.67 | 0.0 | 0.04 | 13.10 | 0.00 | 2.137 | 11.18 | 0.11 | 3.0 | 97.0 | 0.0 | 1.12 | 0.84 | 0.88 | 0.76 | 0.33 | 57164 | 7156 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oSK | 17157 | 2023-12-10 | 2023-04-19 | 3.6 | 4.91 | — | 3.0 | 0.009 | 1.12 | 0.0 | 0.06 | 24.39 | 0.01 | 2.263 | 0.52 | 0.00 | 0.3 | 99.7 | 0.0 | 1.80 | 0.86 | 0.79 | 0.46 | 3.0 | 0.004 | 0.75 | 0.0 | 0.04 | 26.55 | 0.00 | 2.182 | 9.34 | 0.47 | 2.2 | 97.8 | 0.0 | 1.57 | 1.24 | 0.87 | 0.82 | 0.33 | 13995 | 1343 | 12 | 248 | 0 | 0 | 0 | logfile |
✔ | 7oZH | 13124 | 2023-12-07 | 2021-06-28 | 3.02 | 3.20 | 1.84 | 3.3 | 0.024 | 1.40 | 0.0 | 0.09 | 7.44 | 0.01 | 2.546 | 14.72 | 0.00 | 5.4 | 94.6 | 0.0 | -2.78 | 0.33 | 0.60 | 4.68 | 3.2 | 0.004 | 0.69 | 0.0 | 0.05 | 15.03 | 0.00 | 2.382 | 17.11 | 2.05 | 8.2 | 91.8 | 0.0 | -2.61 | 2.53 | 0.40 | 0.69 | 0.33 | 3890 | 580 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PMi | 20394 | 2023-12-08 | 2019-07-02 | 3.86 | 4.66 | — | 4.1 | 0.012 | 1.26 | 0.0 | 0.06 | 16.10 | 0.01 | 1.949 | 12.35 | 0.24 | 10.7 | 88.9 | 0.4 | -4.48 | 0.69 | 0.51 | 0.20 | 4.1 | 0.005 | 0.75 | 0.0 | 0.04 | 17.49 | 0.00 | 1.816 | 25.71 | 0.61 | 11.1 | 88.7 | 0.1 | -2.74 | 1.01 | 0.86 | 0.78 | 0.35 | 57985 | 3453 | 10 | 110 | 4 | 0 | 28610 | logfile |
✔ | 7YoX | 33989 | 2023-12-10 | 2022-08-02 | 3.95 | 4.33 | 4.09 | 4.1 | 0.006 | 1.31 | 8.0 | 0.10 | 27.06 | 0.01 | 0.786 | 33.58 | 46.70 | 1.0 | 98.8 | 0.2 | 2.84 | 0.82 | 0.70 | 0.48 | 4.1 | 0.003 | 0.80 | 0.0 | 0.05 | 18.73 | 0.00 | 2.122 | 24.63 | 0.44 | 2.8 | 97.2 | 0.0 | 0.19 | 1.10 | 0.84 | 0.77 | 0.35 | 13878 | 1749 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7FG3 | 31577 | 2023-12-08 | 2021-07-25 | 3.9 | 3.62 | — | 4.0 | 0.006 | 1.13 | 0.0 | 0.06 | 14.47 | 0.01 | 1.929 | 37.29 | 0.00 | 18.5 | 80.8 | 0.7 | -4.60 | 0.22 | 0.47 | -0.27 | 4.0 | 0.004 | 0.92 | 0.0 | 0.05 | 16.64 | 0.01 | 2.088 | 24.71 | 0.10 | 15.3 | 84.1 | 0.5 | -3.68 | 0.78 | 0.23 | 0.45 | 0.35 | 9054 | 1166 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oMA | 16972 | 2023-12-09 | 2023-03-31 | 3.29 | 2.61 | 3.29 | 3.2 | 0.008 | 1.30 | 1.0 | 0.09 | 19.92 | 0.01 | 1.878 | 28.14 | 2.97 | 7.9 | 92.1 | 0.0 | -1.51 | 0.68 | 0.70 | 0.46 | 1.6 | 0.004 | 0.81 | 0.0 | 0.05 | 20.18 | 0.00 | 1.915 | 24.91 | 0.42 | 6.7 | 93.3 | 0.0 | -0.53 | 1.95 | 0.64 | 0.60 | 0.36 | 11379 | 1337 | 6 | 34 | 3 | 0 | 0 | logfile |
✔ | 8H9R | 34578 | 2023-12-07 | 2022-10-25 | 3.97 | 4.28 | 4.04 | 4.0 | 0.006 | 0.79 | 0.0 | 0.05 | 15.25 | 0.00 | 2.244 | 16.26 | 0.00 | 6.1 | 93.9 | 0.0 | -1.99 | 0.38 | 0.80 | 0.71 | 4.0 | 0.003 | 0.72 | 0.0 | 0.04 | 17.99 | 0.00 | 2.273 | 14.32 | 1.13 | 4.1 | 95.9 | 0.0 | 2.13 | 1.32 | 0.38 | 0.79 | 0.36 | 3381 | 421 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6E1N | 8958 | 2023-12-09 | 2018-07-10 | 3.7 | 3.85 | 3.77 | 3.8 | 0.015 | 1.55 | 0.0 | 0.07 | 14.92 | 0.01 | 2.054 | 10.59 | 0.37 | 8.3 | 91.6 | 0.2 | -5.21 | 0.49 | 0.72 | 1.63 | 3.8 | 0.003 | 0.78 | 0.0 | 0.04 | 16.21 | 0.00 | 2.139 | 13.26 | 0.47 | 6.1 | 93.9 | 0.0 | -0.91 | 0.89 | 0.53 | 0.72 | 0.36 | 10682 | 1278 | 6 | 0 | 24 | 2 | 0 | logfile |
✔ | 7o6B | 12737 | 2023-12-10 | 2021-04-09 | 3.88 | 4.21 | 4.15 | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 11.54 | 0.01 | 2.128 | 6.00 | 0.38 | 4.3 | 95.7 | 0.0 | -0.87 | 0.75 | 0.67 | 0.37 | 3.8 | 0.002 | 0.55 | 0.0 | 0.04 | 14.20 | 0.00 | 2.003 | 10.44 | 0.25 | 4.4 | 95.6 | 0.0 | 0.50 | 1.17 | 0.76 | 0.70 | 0.37 | 14200 | 879 | 1 | 0 | 0 | 0 | 7040 | logfile |
✔ | 6TA3 | 10421 | 2023-12-09 | 2019-10-29 | 3.8 | 4.18 | — | 3.9 | 0.024 | 2.45 | 4.0 | 0.08 | 18.96 | 0.01 | 0.317 | 210.72 | 16.02 | 0.8 | 99.2 | 0.0 | 1.86 | 0.67 | 0.49 | 0.26 | 4.0 | 0.004 | 0.89 | 0.0 | 0.05 | 17.96 | 0.01 | 1.304 | 29.48 | 0.97 | 3.6 | 96.3 | 0.1 | -0.10 | 2.43 | 0.78 | 0.74 | 0.37 | 9491 | 1201 | 6 | 0 | 5 | 0 | 0 | logfile |
✔ | 7RTU | 24689 | 2023-12-07 | 2021-08-15 | 3.89 | 4.06 | — | 4.1 | 0.003 | 0.61 | 0.0 | 0.04 | 17.27 | 0.00 | 2.175 | 7.11 | 0.16 | 3.1 | 96.9 | 0.0 | 4.32 | 0.55 | 0.69 | 0.15 | 4.1 | 0.004 | 0.60 | 0.0 | 0.04 | 16.34 | 0.00 | 2.176 | 7.45 | 0.78 | 2.7 | 97.3 | 0.0 | 4.18 | 0.31 | 0.61 | 0.72 | 0.38 | 5962 | 754 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 8SGQ | 40464 | 2023-12-09 | 2023-04-12 | 3.7 | 4.22 | 3.84 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 14.79 | 0.00 | 2.031 | 16.53 | 0.00 | 5.3 | 94.6 | 0.0 | 0.13 | 0.80 | 0.73 | 0.49 | 3.7 | 0.004 | 0.74 | 0.0 | 0.04 | 16.28 | 0.00 | 2.059 | 21.44 | 0.34 | 6.3 | 93.7 | 0.0 | -0.47 | 0.46 | 0.81 | 0.76 | 0.39 | 62187 | 8093 | 32 | 0 | 16 | 0 | 0 | logfile |
✔ | 7SoY | 25363 | 2023-12-09 | 2021-11-01 | 3.4 | 4.73 | — | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 12.63 | 0.00 | 2.231 | 12.96 | 0.37 | 1.7 | 98.3 | 0.0 | 1.32 | 0.90 | 0.83 | 0.53 | 3.7 | 0.003 | 0.64 | 0.0 | 0.04 | 14.33 | 0.00 | 2.076 | 14.51 | 0.22 | 2.4 | 97.6 | 0.0 | 1.48 | 0.49 | 0.91 | 0.85 | 0.39 | 12180 | 1529 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J89 | 6123 | 2023-12-08 | 2014-10-07 | 3.6 | 2.21 | — | 3.5 | 0.022 | 1.64 | 0.0 | 0.10 | 11.97 | 0.01 | 2.578 | 2.11 | 0.00 | 3.5 | 96.5 | 0.0 | -0.96 | 0.83 | 0.81 | 0.77 | 3.2 | 0.004 | 0.53 | 0.0 | 0.03 | 20.53 | 0.00 | 2.099 | 9.53 | 1.50 | 1.4 | 98.6 | 0.0 | 2.80 | 1.98 | 0.81 | 0.79 | 0.39 | 9025 | 551 | 19 | 0 | 0 | 0 | 4598 | logfile |