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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7MF3 | 23810 | 2024-03-19 | 2021-04-08 | 3.4 | 4.14 | — | 3.2 | 0.003 | 0.68 | 0.0 | 0.04 | 15.41 | 0.00 | 1.985 | 17.36 | 0.04 | 6.5 | 93.5 | 0.0 | -0.34 | 0.90 | 0.73 | 0.19 | 3.1 | 0.002 | 0.70 | 0.0 | 0.04 | 17.51 | 0.00 | 1.949 | 17.16 | 1.41 | 6.9 | 93.1 | 0.0 | -0.86 | 1.44 | 0.91 | 0.74 | 0.14 | 22938 | 2822 | 12 | 0 | 8 | 0 | 0 | logfile |
✔ | 3JCE | 6550 | 2024-03-02 | 2015-12-01 | 3.2 | 4.36 | — | 14.0 | 0.008 | 0.88 | 0.0 | 0.04 | 22.68 | 0.00 | 1.106 | 32.64 | 0.47 | 10.4 | 84.8 | 4.8 | -2.93 | 0.33 | 0.04 | 0.16 | 3.1 | 0.006 | 1.17 | 5.0 | 0.05 | 25.14 | 0.01 | 1.590 | 49.53 | 2.65 | 13.3 | 85.5 | 1.2 | -3.72 | 1.89 | 0.70 | 0.41 | 0.15 | 154017 | 6546 | 59 | 4798 | 2 | 0 | 0 | logfile |
✔ | 6UMM | 20820 | 2024-03-19 | 2019-10-09 | 3.7 | 6.74 | 4.15 | 4.0 | 0.006 | 0.79 | 0.0 | 0.04 | 13.23 | 0.00 | 2.203 | 11.97 | 0.17 | 4.8 | 95.2 | 0.0 | -2.07 | 0.55 | 0.56 | -0.10 | 4.1 | 0.004 | 0.91 | 0.0 | 0.05 | 14.52 | 0.00 | 2.087 | 23.57 | 2.73 | 4.0 | 96.0 | 0.0 | 0.73 | 0.87 | 0.62 | 0.83 | 0.16 | 23658 | 3184 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XMX | 33307 | 2024-03-21 | 2022-04-27 | 3.62 | 3.63 | 3.44 | 22.0 | 0.012 | 1.30 | 7.0 | 0.09 | 12.65 | 0.01 | 1.407 | 4.82 | 1.34 | 6.6 | 93.3 | 0.1 | -0.95 | 0.29 | 0.01 | 0.23 | 21.0 | 0.003 | 0.66 | 0.0 | 0.04 | 14.30 | 0.00 | 2.124 | 10.62 | 2.07 | 5.6 | 94.3 | 0.1 | -0.83 | 1.07 | 0.32 | 0.14 | 0.16 | 28727 | 3700 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 8SES | 40427 | 2024-03-20 | 2023-04-10 | 3.98 | 4.76 | 4.20 | 3.9 | 0.006 | 1.14 | 4.0 | 0.06 | 14.83 | 0.01 | 2.179 | 7.41 | 3.51 | 5.1 | 94.8 | 0.2 | -0.30 | 0.84 | 0.83 | 0.21 | 3.9 | 0.005 | 0.79 | 1.0 | 0.04 | 15.08 | 0.00 | 2.042 | 24.03 | 1.28 | 5.5 | 94.5 | 0.0 | -0.13 | 1.40 | 0.84 | 0.85 | 0.16 | 142940 | 17936 | 12 | 4 | 4 | 0 | 0 | logfile |
✔ | 7WoT | 32658 | 2024-03-17 | 2022-01-22 | 3.73 | 4.26 | — | 3.8 | 0.010 | 1.69 | 284.0 | 0.10 | 15.82 | 0.01 | 1.016 | 24.03 | 4.41 | 9.4 | 88.4 | 2.2 | -3.07 | 0.49 | 0.33 | 0.06 | 3.9 | 0.003 | 0.82 | 0.0 | 0.04 | 16.50 | 0.00 | 2.072 | 17.00 | 2.33 | 8.0 | 91.7 | 0.3 | -0.70 | 1.09 | 0.55 | 0.43 | 0.17 | 133827 | 17285 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YUF | 10930 | 2024-03-18 | 2020-04-27 | 3.94 | 4.30 | 4.21 | 4.1 | 0.018 | 1.71 | 8.0 | 0.08 | 18.16 | 0.01 | 2.033 | 13.39 | 0.24 | 8.9 | 91.1 | 0.0 | -3.37 | 0.77 | 0.75 | 0.41 | 4.2 | 0.003 | 0.74 | 0.0 | 0.04 | 19.22 | 0.00 | 2.059 | 14.16 | 1.46 | 7.5 | 92.4 | 0.0 | -0.82 | 0.62 | 0.78 | 0.77 | 0.17 | 19528 | 2264 | 8 | 64 | 4 | 0 | 0 | logfile |
✔ | 7DGD | 30671 | 2024-03-15 | 2020-11-11 | 3.96 | 4.40 | — | 4.2 | 0.015 | 2.08 | 10.0 | 0.12 | 15.16 | 0.01 | 1.930 | 4.79 | 3.87 | 9.2 | 89.9 | 0.9 | -4.26 | 0.61 | 0.53 | 0.38 | 4.2 | 0.003 | 0.82 | 0.0 | 0.04 | 16.33 | 0.00 | 2.169 | 16.07 | 2.63 | 7.7 | 92.3 | 0.1 | -1.66 | 1.89 | 0.69 | 0.67 | 0.17 | 12381 | 1572 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 5GAK | 3227 | 2024-03-15 | 2015-12-09 | 3.88 | 4.13 | — | 19.0 | 0.006 | 0.94 | 0.0 | 0.06 | 25.75 | 0.01 | 0.816 | 23.89 | 0.26 | 9.2 | 90.2 | 0.7 | -3.81 | 0.21 | 0.02 | 0.28 | 3.9 | 0.003 | 0.77 | 0.0 | 0.04 | 24.43 | 0.00 | 1.986 | 20.92 | 2.20 | 8.8 | 90.9 | 0.4 | -2.53 | 1.95 | 0.33 | 0.23 | 0.18 | 128975 | 6434 | 50 | 3597 | 234 | 0 | 0 | logfile |
✔ | 6VQU | 21357 | 2024-03-17 | 2020-02-05 | 3.88 | 4.99 | 3.94 | 4.1 | 0.007 | 0.94 | 0.0 | 0.06 | 14.62 | 0.01 | 2.276 | 5.09 | 1.70 | 3.4 | 96.6 | 0.0 | -2.26 | 0.73 | 0.86 | 0.46 | 4.1 | 0.004 | 0.69 | 0.0 | 0.04 | 15.12 | 0.00 | 2.191 | 13.92 | 1.49 | 2.6 | 97.4 | 0.0 | 2.20 | 1.04 | 0.73 | 0.88 | 0.18 | 9156 | 1178 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Woo | 32653 | 2024-03-14 | 2022-01-22 | 3.71 | 4.08 | — | 3.9 | 0.010 | 1.69 | 139.0 | 0.10 | 15.86 | 0.01 | 1.041 | 23.12 | 4.33 | 9.3 | 88.5 | 2.2 | -3.11 | 0.47 | 0.44 | 0.31 | 3.9 | 0.005 | 0.90 | 2.0 | 0.04 | 16.67 | 0.01 | 1.952 | 19.85 | 3.59 | 9.5 | 90.2 | 0.4 | -0.73 | 1.62 | 0.48 | 0.45 | 0.18 | 66949 | 8644 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6o9J | 0661 | 2024-03-20 | 2019-03-14 | 3.9 | 3.92 | — | 3.9 | 0.006 | 1.25 | 25.0 | 0.10 | 24.37 | 0.01 | 0.154 | 55.29 | 23.17 | 26.6 | 58.7 | 14.7 | -7.10 | 0.74 | 0.66 | 0.16 | 3.9 | 0.011 | 1.15 | 6.0 | 0.05 | 24.09 | 0.01 | 1.282 | 34.98 | 8.65 | 25.0 | 72.2 | 2.9 | -4.91 | 1.31 | 0.80 | 0.77 | 0.18 | 142682 | 5731 | 53 | 4564 | 0 | 0 | 0 | logfile |
✔ | 7YLV | 33918 | 2024-03-13 | 2022-07-27 | 3.91 | 4.23 | 4.38 | 4.3 | 0.009 | 0.68 | 0.0 | 0.06 | 10.36 | 0.00 | 2.239 | 1.53 | 0.03 | 2.3 | 97.6 | 0.2 | -0.18 | 0.55 | 0.40 | 0.18 | 4.3 | 0.004 | 1.05 | 1.0 | 0.05 | 15.61 | 0.00 | 2.080 | 25.07 | 2.82 | 3.6 | 96.3 | 0.1 | -0.32 | 2.25 | 0.74 | 0.73 | 0.18 | 65495 | 8564 | 17 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WTD | 32779 | 2024-03-20 | 2022-02-04 | 3.9 | 5.03 | — | 4.3 | 0.023 | 1.20 | 1.0 | 0.05 | 15.55 | 0.01 | 0.990 | 21.59 | 1.15 | 7.3 | 92.6 | 0.1 | -0.88 | 0.81 | 0.61 | 0.10 | 4.4 | 0.003 | 0.80 | 0.0 | 0.04 | 16.53 | 0.00 | 2.084 | 18.48 | 2.20 | 6.9 | 93.0 | 0.1 | -1.00 | 4.63 | 0.84 | 0.70 | 0.18 | 27137 | 3491 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 7YPH | 34000 | 2024-03-21 | 2022-08-03 | 3.68 | 4.64 | 3.77 | 3.7 | 0.008 | 1.31 | 1.0 | 0.07 | 14.04 | 0.01 | 2.197 | 16.14 | 0.15 | 8.5 | 91.5 | 0.1 | -3.48 | 0.81 | 0.63 | 0.30 | 3.7 | 0.004 | 0.77 | 0.0 | 0.05 | 15.80 | 0.00 | 2.076 | 30.43 | 2.25 | 9.0 | 91.0 | 0.0 | -1.81 | 0.45 | 0.83 | 0.70 | 0.19 | 30407 | 3865 | 7 | 0 | 2 | 0 | 0 | logfile |
✔ | 7YPJ | 34002 | 2024-03-21 | 2022-08-03 | 3.8 | 4.94 | 3.94 | 3.8 | 0.008 | 1.26 | 0.0 | 0.07 | 13.23 | 0.01 | 2.167 | 19.20 | 0.12 | 8.5 | 91.5 | 0.1 | -2.82 | 0.87 | 0.69 | 0.19 | 3.8 | 0.003 | 0.80 | 0.0 | 0.04 | 15.27 | 0.00 | 2.051 | 27.99 | 1.60 | 7.8 | 92.2 | 0.0 | -1.57 | 1.24 | 0.88 | 0.73 | 0.19 | 30478 | 3865 | 9 | 0 | 4 | 0 | 0 | logfile |
✔ | 6Q2S | 20579 | 2024-03-16 | 2019-08-08 | 3.8 | 4.19 | — | 4.0 | 0.008 | 1.06 | 0.0 | 0.06 | 9.19 | 0.01 | 1.366 | 3.84 | 0.13 | 7.6 | 92.4 | 0.0 | -4.58 | 0.64 | 0.51 | 0.55 | 4.0 | 0.003 | 0.80 | 0.0 | 0.04 | 14.25 | 0.00 | 2.026 | 15.82 | 3.38 | 6.2 | 93.8 | 0.0 | -2.25 | 1.86 | 0.74 | 0.70 | 0.19 | 13726 | 1734 | 10 | 0 | 22 | 0 | 0 | logfile |
✔ | 6RED | 4850 | 2024-03-22 | 2019-04-12 | 3.0 | 3.22 | 3.14 | 27.0 | 0.012 | 1.04 | 0.0 | 0.06 | 14.61 | 0.01 | 2.140 | 5.83 | 0.31 | 4.7 | 95.2 | 0.1 | -3.86 | 0.16 | 0.02 | 0.19 | 27.0 | 0.004 | 0.80 | 0.0 | 0.05 | 15.82 | 0.01 | 1.837 | 19.88 | 2.41 | 5.4 | 94.4 | 0.1 | -1.04 | 0.96 | 0.24 | 0.16 | 0.19 | 33899 | 4503 | 25 | 0 | 10 | 0 | 0 | logfile |
✔ | 8F4X | 28858 | 2024-03-22 | 2022-11-11 | 3.01 | 3.72 | 3.03 | 3.4 | 0.004 | 0.55 | 0.0 | 0.03 | 15.82 | 0.00 | 2.226 | 5.99 | 0.00 | 0.6 | 99.4 | 0.0 | 0.06 | 0.84 | 0.83 | 1.71 | 3.4 | 0.003 | 0.45 | 0.0 | 0.03 | 17.37 | 0.00 | 2.267 | 5.35 | 1.52 | 0.1 | 99.9 | 0.0 | 5.20 | 0.44 | 0.85 | 0.85 | 0.20 | 32760 | 4020 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RYE | 24735 | 2024-03-18 | 2021-08-25 | 3.9 | 4.10 | — | 4.0 | 0.003 | 0.65 | 0.0 | 0.04 | 14.57 | 0.00 | 2.090 | 14.13 | 0.00 | 3.7 | 96.3 | 0.0 | 1.07 | 0.76 | 0.69 | -0.18 | 4.0 | 0.003 | 0.72 | 0.0 | 0.04 | 17.76 | 0.00 | 2.100 | 15.41 | 3.80 | 4.0 | 96.0 | 0.0 | 1.41 | 1.07 | 0.81 | 0.80 | 0.20 | 19708 | 2535 | 24 | 0 | 0 | 0 | 0 | logfile |