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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6TA3 | 10421 | 2023-02-19 | 2019-10-29 | 3.8 | 4.18 | — | 3.9 | 0.024 | 2.45 | 4.0 | 0.08 | 18.76 | 0.01 | 0.317 | 210.72 | 16.02 | 0.8 | 99.2 | 0.0 | 1.86 | 0.67 | 0.49 | 0.26 | 4.0 | 0.004 | 0.87 | 0.0 | 0.05 | 17.69 | 0.01 | 1.221 | 29.86 | 0.58 | 3.4 | 96.6 | 0.0 | -0.26 | 2.45 | 0.78 | 0.74 | 0.35 | 9491 | 1201 | 6 | 0 | 5 | 0 | 0 | logfile |
✔ | 7oH5 | 12894 | 2023-02-20 | 2021-05-09 | 2.9 | 3.43 | 2.96 | 3.3 | 0.005 | 1.12 | 0.0 | 0.04 | 10.74 | 0.00 | 1.656 | 5.05 | 1.19 | 4.6 | 95.4 | 0.0 | -4.15 | 0.65 | 0.75 | 3.22 | 3.4 | 0.003 | 0.84 | 0.0 | 0.04 | 14.59 | 0.00 | 1.227 | 7.77 | 1.59 | 4.4 | 95.5 | 0.1 | -0.65 | 2.18 | 0.68 | 0.78 | 2.73 | 11603 | 1419 | 8 | 0 | 14 | 2 | 0 | logfile |
✔ | 5VZL | 8749 | 2023-02-21 | 2017-05-29 | 3.9 | 4.38 | — | 19.0 | 0.006 | 0.96 | 0.0 | 0.05 | 14.28 | 0.01 | 2.216 | 7.72 | 0.25 | 8.4 | 91.6 | 0.0 | -4.13 | 0.31 | 0.03 | -0.03 | 17.0 | 0.002 | 0.66 | 0.0 | 0.04 | 15.70 | 0.00 | 1.245 | 12.48 | 0.50 | 5.0 | 95.0 | 0.0 | -1.31 | 1.26 | 0.38 | 0.19 | 0.61 | 13915 | 1451 | 3 | 115 | 1 | 0 | 0 | logfile |
✔ | 7X7N | 33042 | 2023-02-25 | 2022-03-10 | 4.47 | 4.03 | 4.49 | 4.2 | 0.013 | 1.04 | 6.0 | 0.06 | 14.74 | 0.01 | 1.956 | 29.07 | 0.52 | 19.6 | 80.3 | 0.1 | -5.63 | 0.73 | 0.77 | — | 4.1 | 0.004 | 0.78 | 6.0 | 0.05 | 14.24 | 0.00 | 1.262 | 15.16 | 0.00 | 10.0 | 90.0 | 0.0 | -2.67 | 0.76 | 0.72 | 0.77 | — | 26493 | 3314 | 12 | 0 | 45 | 0 | 0 | logfile |
✔ | 8E5P | 27917 | 2023-02-23 | 2022-08-22 | 4.4 | 9.89 | 6.01 | 8.2 | 0.003 | 0.64 | 0.0 | 0.04 | 11.32 | 0.00 | 1.299 | 26.66 | 1.63 | 1.3 | 98.4 | 0.3 | -0.83 | 0.61 | 0.33 | — | 8.2 | 0.003 | 0.69 | 0.0 | 0.04 | 11.81 | 0.00 | 1.266 | 18.73 | 0.00 | 2.8 | 97.2 | 0.0 | 0.85 | 1.53 | 0.85 | 0.77 | — | 20038 | 2502 | 13 | 8 | 18 | 0 | 0 | logfile |
✔ | 7LYT | 23601 | 2023-02-21 | 2021-03-08 | 2.9 | 2.52 | 2.91 | 3.0 | 0.009 | 0.55 | 0.0 | 0.04 | 18.78 | 0.03 | 2.087 | 7.16 | 0.33 | 0.0 | 100.0 | 0.0 | -1.59 | 0.82 | 0.80 | 2.24 | 3.0 | 0.004 | 0.85 | 0.0 | 0.04 | 19.93 | 0.00 | 1.280 | 9.04 | 1.82 | 5.4 | 94.6 | 0.0 | -0.15 | 1.22 | 0.83 | 0.82 | 3.02 | 14354 | 712 | 5 | 92 | 6 | 0 | 6722 | logfile |
✔ | 7LAR | 23249 | 2023-02-22 | 2021-01-06 | 3.8 | 3.68 | — | 3.8 | 0.009 | 1.20 | 0.0 | 0.06 | 17.51 | 0.01 | 1.993 | 4.90 | 7.44 | 1.5 | 98.5 | 0.0 | -2.56 | 0.62 | 0.81 | 2.85 | 3.8 | 0.003 | 0.68 | 0.0 | 0.04 | 16.33 | 0.00 | 1.298 | 9.23 | 0.52 | 8.5 | 91.5 | 0.0 | -1.53 | 1.47 | 0.61 | 0.81 | 2.58 | 17714 | 1098 | 11 | 6 | 8 | 0 | 8697 | logfile |
✔ | 7LAS | 23250 | 2023-02-22 | 2021-01-06 | 4.4 | 4.09 | — | 4.1 | 0.009 | 1.36 | 0.0 | 0.06 | 18.99 | 0.01 | 1.386 | 5.45 | 7.55 | 1.5 | 98.5 | 0.0 | -2.56 | 0.60 | 0.75 | — | 4.1 | 0.003 | 0.71 | 0.0 | 0.04 | 16.31 | 0.00 | 1.299 | 12.60 | 0.10 | 7.1 | 92.9 | 0.0 | -1.60 | 1.77 | 0.62 | 0.77 | — | 18011 | 1098 | 12 | 24 | 8 | 0 | 8624 | logfile |
✔ | 6Yo0 | 10862 | 2023-02-22 | 2020-04-14 | 2.9 | 3.37 | 2.94 | 3.1 | 0.009 | 0.75 | 0.0 | 0.04 | 9.57 | 0.00 | 1.889 | 11.21 | 0.27 | 3.7 | 96.3 | 0.0 | -0.60 | 0.84 | 0.87 | 3.83 | 3.1 | 0.004 | 0.57 | 0.0 | 0.04 | 13.62 | 0.00 | 1.300 | 8.27 | 0.64 | 4.4 | 95.6 | 0.0 | 1.08 | 0.80 | 0.84 | 0.89 | 3.23 | 55780 | 3598 | 17 | 0 | 10 | 0 | 28102 | logfile |
✔ | 7LoK | 23465 | 2023-02-21 | 2021-02-10 | 3.9 | 4.11 | — | 4.0 | 0.006 | 1.13 | 4.0 | 0.07 | 13.50 | 0.01 | 1.226 | 14.81 | 0.39 | 11.9 | 88.0 | 0.2 | -5.60 | 0.76 | 0.77 | 2.26 | 4.0 | 0.003 | 0.72 | 3.0 | 0.04 | 15.11 | 0.00 | 1.315 | 9.07 | 0.23 | 6.5 | 93.4 | 0.1 | -2.93 | 1.24 | 0.77 | 0.80 | 1.56 | 14498 | 1999 | 19 | 0 | 32 | 0 | 0 | logfile |
✔ | 6K32 | 9907 | 2023-02-23 | 2019-05-16 | 3.2 | 3.73 | — | 3.8 | 0.009 | 1.22 | 1.0 | 0.07 | 11.49 | 0.01 | 1.345 | 10.20 | 1.25 | 6.3 | 93.3 | 0.3 | -4.88 | 0.28 | 0.72 | 1.49 | 3.7 | 0.005 | 0.80 | 0.0 | 0.05 | 16.31 | 0.00 | 1.315 | 12.68 | 0.61 | 5.9 | 94.1 | 0.1 | -1.36 | 1.63 | 0.31 | 0.82 | 2.34 | 61364 | 7723 | 10 | 8 | 6 | 0 | 0 | logfile |
✔ | 7NKU | 12448 | 2023-02-25 | 2021-02-19 | 3.4 | 3.03 | — | 3.1 | 0.008 | 0.94 | 0.0 | 0.05 | 14.98 | 0.01 | 1.986 | 17.36 | 0.00 | 9.2 | 90.8 | 0.0 | -0.63 | 0.74 | 0.77 | 1.90 | 3.1 | 0.004 | 0.81 | 0.0 | 0.04 | 17.70 | 0.01 | 1.318 | 17.14 | 0.56 | 7.3 | 92.7 | 0.0 | -0.05 | 0.69 | 0.73 | 0.79 | 1.22 | 25332 | 3252 | 12 | 0 | 18 | 0 | 0 | logfile |
✔ | 6JT2 | 9885 | 2023-02-18 | 2019-04-08 | 3.8 | 3.88 | — | 3.8 | 0.004 | 0.74 | 0.0 | 0.04 | 11.14 | 0.01 | 1.980 | 10.08 | 3.54 | 4.0 | 95.7 | 0.3 | -2.54 | 0.80 | 0.80 | 2.23 | 3.8 | 0.003 | 0.69 | 0.0 | 0.04 | 13.57 | 0.00 | 1.319 | 10.96 | 0.12 | 3.7 | 96.3 | 0.0 | -0.17 | 1.66 | 0.82 | 0.81 | 1.64 | 8191 | 1075 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6W98 | 21580 | 2023-02-19 | 2020-03-22 | 2.9 | 3.47 | 2.92 | 3.3 | 0.010 | 0.86 | 0.0 | 0.05 | 12.85 | 0.01 | 1.990 | 2.57 | 0.00 | 4.4 | 95.6 | 0.1 | -4.30 | 0.67 | 0.84 | 3.77 | 3.3 | 0.003 | 0.65 | 0.0 | 0.04 | 14.49 | 0.00 | 1.327 | 7.81 | 1.81 | 3.9 | 96.1 | 0.0 | -0.06 | 0.49 | 0.67 | 0.85 | 3.05 | 10317 | 1389 | 3 | 0 | 4 | 1 | 0 | logfile |
✔ | 5MMJ | 3532 | 2023-02-22 | 2016-12-10 | 3.6 | 3.88 | — | 3.6 | 0.008 | 1.15 | 0.0 | 0.05 | 16.66 | 0.01 | 1.774 | 10.61 | 7.28 | 4.9 | 94.8 | 0.3 | -3.46 | 0.92 | 0.86 | 1.28 | 3.6 | 0.005 | 0.71 | 0.0 | 0.04 | 16.28 | 0.01 | 1.334 | 19.31 | 1.26 | 5.4 | 94.4 | 0.1 | -0.53 | 1.60 | 0.91 | 0.85 | 1.05 | 55315 | 2806 | 31 | 1484 | 359 | 0 | 0 | logfile |
✔ | 7LEZ | 23295 | 2023-02-26 | 2021-01-15 | 4.15 | 2.14 | 4.23 | 3.9 | 0.007 | 1.20 | 0.0 | 0.06 | 10.28 | 0.01 | 1.255 | 11.69 | 0.91 | 10.1 | 89.2 | 0.7 | -4.35 | 0.77 | 0.65 | — | 3.9 | 0.004 | 0.85 | 0.0 | 0.05 | 11.82 | 0.01 | 1.340 | 21.28 | 0.00 | 10.5 | 89.3 | 0.2 | -2.00 | 1.82 | 0.78 | 0.66 | — | 27794 | 3654 | 20 | 0 | 12 | 0 | 0 | logfile |
✔ | 8ADG | 15362 | 2023-02-24 | 2022-07-08 | 3.0 | 3.31 | 3.06 | 3.3 | 0.006 | 0.62 | 0.0 | 0.04 | 14.03 | 0.00 | 1.941 | 3.67 | 0.00 | 4.0 | 96.0 | 0.0 | 0.24 | 0.64 | 0.82 | 3.73 | 3.3 | 0.003 | 0.51 | 0.0 | 0.04 | 15.23 | 0.00 | 1.375 | 3.11 | 1.11 | 4.0 | 96.0 | 0.0 | 0.35 | 0.90 | 0.60 | 0.83 | 3.53 | 23183 | 1506 | 6 | 0 | 0 | 0 | 11375 | logfile |
✔ | 6YJ4 | 10815 | 2023-02-25 | 2020-04-02 | 2.7 | 2.35 | 2.73 | 2.6 | 0.011 | 1.10 | 0.0 | 0.65 | 14.92 | 0.01 | 2.031 | 2.88 | 0.03 | 4.1 | 95.8 | 0.0 | -2.17 | 0.58 | 0.79 | 4.22 | 2.5 | 0.005 | 1.03 | 0.0 | 0.18 | 16.84 | 0.00 | 1.386 | 6.85 | 1.61 | 3.4 | 96.6 | 0.0 | 0.76 | 0.57 | 0.63 | 0.84 | 3.71 | 66311 | 8126 | 94 | 0 | 50 | 275 | 0 | logfile |
✔ | 7SLQ | 25198 | 2023-02-17 | 2021-10-24 | 3.7 | 3.95 | — | 3.9 | 0.011 | 1.16 | 1.0 | 0.06 | 14.97 | 0.01 | 2.144 | 6.53 | 1.35 | 3.7 | 96.3 | 0.0 | -2.83 | 0.74 | 0.70 | 2.35 | 3.9 | 0.002 | 0.58 | 0.0 | 0.04 | 16.03 | 0.01 | 1.388 | 8.68 | 0.22 | 5.1 | 94.9 | 0.0 | 0.17 | 1.30 | 0.75 | 0.72 | 1.87 | 5451 | 559 | 4 | 50 | 1 | 0 | 0 | logfile |
✔ | 6XH8 | 22185 | 2023-02-24 | 2020-06-18 | 4.1 | 4.25 | — | 3.9 | 0.012 | 1.12 | 0.0 | 0.06 | 14.73 | 0.01 | 2.006 | 9.71 | 0.27 | 13.7 | 86.2 | 0.1 | -4.93 | 0.82 | 0.73 | — | 3.9 | 0.003 | 0.64 | 0.0 | 0.04 | 15.25 | 0.00 | 1.412 | 12.88 | 0.03 | 8.0 | 91.9 | 0.1 | -2.13 | 1.27 | 0.81 | 0.74 | — | 65970 | 3951 | 14 | 110 | 5 | 0 | 32621 | logfile |