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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5o5J | 3748 | 2024-03-25 | 2017-06-02 | 3.45 | 3.51 | — | 3.4 | 0.008 | 1.20 | 0.0 | 0.05 | 24.37 | 0.01 | 1.740 | 9.43 | 11.65 | 5.4 | 94.5 | 0.1 | -3.62 | 0.65 | 0.87 | 1.42 | 3.4 | 0.004 | 0.64 | 0.0 | 0.04 | 23.51 | 0.00 | 1.028 | 12.62 | 5.80 | 4.7 | 95.1 | 0.1 | 0.25 | 0.66 | 0.64 | 0.85 | 1.70 | 52163 | 2406 | 28 | 1536 | 219 | 0 | 0 | logfile |
✔ | 7T76 | 25735 | 2024-03-17 | 2021-12-14 | 4.43 | 4.68 | 4.39 | 4.5 | 0.022 | 1.97 | 2.0 | 0.14 | 12.89 | 0.02 | 0.530 | 1.29 | 0.77 | 3.4 | 96.4 | 0.3 | 0.31 | 0.81 | 0.80 | — | 4.5 | 0.003 | 0.68 | 0.0 | 0.05 | 11.71 | 0.00 | 1.029 | 10.98 | 0.00 | 4.6 | 95.4 | 0.1 | -0.42 | 1.87 | 0.81 | 0.81 | — | 16587 | 1934 | 42 | 0 | 104 | 0 | 0 | logfile |
✔ | 5UYP | 8619 | 2024-03-02 | 2017-02-24 | 3.9 | 4.42 | 4.29 | 3.6 | 0.007 | 1.07 | 0.0 | 0.09 | 22.43 | 0.01 | 1.318 | 13.07 | 1.57 | 14.3 | 82.6 | 3.1 | -5.15 | 0.87 | 0.79 | 0.53 | 3.6 | 0.004 | 0.73 | 0.0 | 0.04 | 23.84 | 0.01 | 1.030 | 28.72 | 5.39 | 12.3 | 87.6 | 0.2 | -3.02 | 0.77 | 0.87 | 0.82 | 0.39 | 153780 | 6476 | 63 | 4811 | 1 | 0 | 0 | logfile |
✔ | 5WFS | 8829 | 2024-03-02 | 2017-07-12 | 3.0 | 3.09 | 3.13 | 3.0 | 0.008 | 1.16 | 2.0 | 0.10 | 24.59 | 0.02 | 1.324 | 4.18 | 3.10 | 9.3 | 88.2 | 2.4 | -4.11 | 0.73 | 0.77 | 2.42 | 3.0 | 0.006 | 0.84 | 1.0 | 0.04 | 24.01 | 0.01 | 1.031 | 12.54 | 4.92 | 8.9 | 90.5 | 0.6 | -1.93 | 1.52 | 0.84 | 0.85 | 2.39 | 155100 | 6324 | 114 | 4802 | 1479 | 1175 | 0 | logfile |
✔ | 7NVX | 12616 | 2024-03-19 | 2021-03-16 | 3.9 | 3.92 | 3.77 | 3.8 | 0.003 | 0.49 | 0.0 | 0.04 | 15.66 | 0.00 | 1.971 | 6.61 | 0.00 | 4.5 | 95.5 | 0.0 | 0.85 | 0.70 | 0.64 | 1.31 | 3.8 | 0.003 | 0.71 | 0.0 | 0.04 | 17.97 | 0.00 | 1.031 | 15.20 | 2.21 | 4.3 | 95.6 | 0.0 | -0.34 | 0.92 | 0.71 | 0.65 | 1.06 | 23663 | 2796 | 18 | 50 | 35 | 0 | 0 | logfile |
✔ | 6WM3 | 21848 | 2024-03-15 | 2020-04-20 | 3.4 | 3.61 | — | 3.5 | 0.007 | 0.71 | 0.0 | 0.04 | 16.95 | 0.00 | 2.026 | 11.26 | 8.84 | 7.8 | 92.2 | 0.0 | -2.80 | 0.76 | 0.82 | 2.00 | 3.5 | 0.005 | 0.80 | 1.0 | 0.04 | 17.27 | 0.00 | 1.032 | 12.70 | 4.88 | 6.3 | 93.7 | 0.0 | -0.06 | 0.49 | 0.78 | 0.85 | 1.82 | 69755 | 9210 | 39 | 0 | 9 | 0 | 0 | logfile |
✔ | 7UiM | 26549 | 2024-03-16 | 2022-03-29 | 3.1 | 4.12 | 3.81 | 3.6 | 0.005 | 0.87 | 0.0 | 0.04 | 24.93 | 0.01 | 1.903 | 9.02 | 0.00 | 3.7 | 96.3 | 0.0 | -1.28 | 0.67 | 0.47 | 0.98 | 3.6 | 0.004 | 0.70 | 0.0 | 0.04 | 25.12 | 0.00 | 1.036 | 26.43 | 3.81 | 6.3 | 93.4 | 0.3 | -0.41 | 2.81 | 0.79 | 0.76 | 0.57 | 14772 | 387 | 3 | 541 | 15 | 0 | 0 | logfile |
✔ | 3J92 | 2832 | 2024-03-23 | 2014-12-02 | 3.6 | 3.74 | — | 3.7 | 0.010 | 1.59 | 52.0 | 0.11 | 26.72 | 0.01 | 1.186 | 15.75 | 18.87 | 11.1 | 85.7 | 3.2 | -3.22 | 0.79 | 0.74 | 0.42 | 3.7 | 0.007 | 0.88 | 0.0 | 0.05 | 24.87 | 0.01 | 1.037 | 16.76 | 5.78 | 9.0 | 90.5 | 0.5 | -1.78 | 1.10 | 0.86 | 0.86 | 1.69 | 146386 | 7246 | 65 | 4013 | 593 | 0 | 0 | logfile |
✔ | 6PEK | 20327 | 2024-03-15 | 2019-06-20 | 4.2 | 4.25 | — | 4.2 | 0.005 | 0.73 | 0.0 | 0.03 | 13.79 | 0.00 | 1.913 | 4.42 | 0.00 | 0.8 | 99.2 | 0.0 | -2.47 | 0.70 | 0.74 | — | 4.2 | 0.004 | 0.73 | 0.0 | 0.04 | 14.94 | 0.00 | 1.037 | 15.04 | 0.00 | 3.0 | 97.0 | 0.0 | -0.32 | 1.43 | 0.72 | 0.77 | — | 11106 | 1405 | 11 | 0 | 13 | 0 | 0 | logfile |
✔ | 5LMo | 4074 | 2024-03-10 | 2016-08-01 | 4.3 | 4.71 | 4.30 | 4.3 | 0.009 | 1.47 | 50.0 | 0.12 | 26.49 | 0.01 | 0.865 | 18.49 | 20.40 | 10.6 | 85.8 | 3.6 | -2.76 | 0.80 | 0.69 | — | 4.3 | 0.004 | 0.72 | 0.0 | 0.04 | 23.97 | 0.01 | 1.038 | 31.29 | 0.00 | 8.9 | 90.5 | 0.5 | -1.73 | 2.17 | 0.88 | 0.84 | — | 54110 | 2622 | 29 | 1533 | 110 | 0 | 0 | logfile |
✔ | 7MT3 | 23975 | 2024-03-24 | 2021-05-12 | 2.8 | 2.45 | — | 2.9 | 0.007 | 0.79 | 0.0 | 0.04 | 22.33 | 0.01 | 1.298 | 2.40 | 0.13 | 7.0 | 92.9 | 0.1 | -4.52 | 0.84 | 0.86 | 4.06 | 2.9 | 0.007 | 0.65 | 0.0 | 0.04 | 22.39 | 0.01 | 1.038 | 5.99 | 2.40 | 6.5 | 93.4 | 0.1 | -1.13 | 2.16 | 0.84 | 0.87 | 3.16 | 147942 | 5616 | 68 | 4835 | 441 | 0 | 0 | logfile |
✔ | 7ACJ | 11717 | 2024-03-27 | 2020-09-11 | 3.2 | 3.44 | 3.22 | 3.1 | 0.003 | 0.61 | 19.0 | 0.03 | 23.55 | 0.02 | 0.852 | 13.29 | 0.61 | 5.1 | 94.7 | 0.2 | -0.99 | 0.85 | 0.81 | 1.87 | 3.1 | 0.004 | 0.70 | 3.0 | 0.04 | 23.84 | 0.01 | 1.044 | 15.30 | 4.30 | 7.3 | 92.6 | 0.1 | -1.20 | 0.61 | 0.88 | 0.87 | 2.04 | 151803 | 5864 | 64 | 4920 | 310 | 0 | 0 | logfile |
✔ | 8E5L | 27914 | 2024-03-18 | 2022-08-22 | 4.2 | 8.91 | 5.82 | 7.6 | 0.003 | 0.64 | 0.0 | 0.04 | 11.89 | 0.00 | 1.299 | 26.62 | 1.63 | 1.3 | 98.4 | 0.3 | -0.83 | 0.63 | 0.37 | — | 7.5 | 0.003 | 0.67 | 0.0 | 0.04 | 12.16 | 0.00 | 1.045 | 20.25 | 0.05 | 2.6 | 97.4 | 0.0 | 0.66 | 1.20 | 0.89 | 0.83 | — | 20058 | 2502 | 13 | 9 | 18 | 0 | 0 | logfile |
✔ | 5ooL | 3842 | 2024-03-20 | 2017-08-08 | 3.06 | 5.10 | 3.10 | 4.9 | 0.009 | 1.05 | 2.0 | 0.06 | 18.65 | 0.01 | 0.037 | 6.31 | 0.54 | 5.0 | 94.9 | 0.1 | -3.52 | 0.77 | 0.61 | 0.86 | 4.9 | 0.005 | 0.91 | 1.0 | 0.05 | 21.01 | 0.01 | 1.050 | 29.75 | 4.96 | 6.5 | 93.4 | 0.0 | -1.20 | 1.56 | 0.78 | 0.71 | 0.73 | 98998 | 8198 | 66 | 1497 | 124 | 0 | 0 | logfile |
✔ | 7ACR | 11718 | 2024-03-27 | 2020-09-11 | 3.44 | 3.72 | 3.11 | 2.6 | 0.003 | 0.65 | 21.0 | 0.04 | 23.55 | 0.02 | 0.444 | 14.05 | 1.77 | 5.3 | 94.3 | 0.4 | -1.02 | 0.87 | 0.78 | 1.12 | 2.5 | 0.004 | 0.70 | 0.0 | 0.04 | 23.96 | 0.01 | 1.051 | 19.40 | 4.59 | 7.8 | 92.1 | 0.1 | -1.60 | 1.63 | 0.89 | 0.84 | 1.23 | 151668 | 5858 | 66 | 4920 | 214 | 0 | 0 | logfile |
✔ | 5o61 | 3751 | 2024-03-27 | 2017-06-03 | 3.31 | 3.39 | — | 3.3 | 0.007 | 0.99 | 0.0 | 0.04 | 24.46 | 0.01 | 1.579 | 7.50 | 10.91 | 4.7 | 95.1 | 0.2 | -3.02 | 0.83 | 0.88 | 2.03 | 3.3 | 0.005 | 0.65 | 0.0 | 0.04 | 23.97 | 0.00 | 1.052 | 11.55 | 7.11 | 4.7 | 95.3 | 0.0 | -0.14 | 0.65 | 0.83 | 0.87 | 1.63 | 151463 | 6088 | 73 | 4830 | 631 | 0 | 0 | logfile |
✔ | 5XYM | 6789 | 2024-03-18 | 2017-07-09 | 3.08 | 3.42 | — | 3.4 | 0.006 | 1.01 | 7.0 | 0.10 | 23.42 | 0.00 | 1.297 | 4.08 | 2.56 | 7.8 | 89.6 | 2.5 | -3.59 | 0.66 | 0.78 | 3.19 | 3.4 | 0.006 | 0.72 | 0.0 | 0.04 | 23.30 | 0.01 | 1.053 | 7.48 | 5.47 | 8.9 | 89.9 | 1.2 | -1.82 | 0.50 | 0.77 | 0.86 | 2.53 | 84069 | 3122 | 32 | 2781 | 146 | 0 | 0 | logfile |
✔ | 8FLD | 29275 | 2024-03-25 | 2022-12-21 | 2.58 | 2.89 | 2.64 | 2.9 | 0.009 | 0.83 | 0.0 | 0.04 | 21.82 | 0.03 | 1.041 | 2.28 | 0.00 | 2.1 | 97.9 | 0.0 | -0.07 | 0.86 | 0.86 | 4.32 | 2.9 | 0.004 | 0.70 | 0.0 | 0.03 | 22.11 | 0.01 | 1.053 | 5.54 | 2.01 | 2.1 | 97.9 | 0.0 | 1.04 | 0.45 | 0.86 | 0.88 | 3.66 | 148569 | 8505 | 68 | 3718 | 93 | 0 | 0 | logfile |
✔ | 7TR9 | 26083 | 2024-03-22 | 2022-01-28 | 3.9 | 4.30 | — | 4.1 | 0.003 | 0.68 | 2.0 | 0.05 | 13.73 | 0.00 | 1.387 | 16.20 | 0.17 | 8.7 | 90.9 | 0.4 | -2.44 | 0.80 | 0.72 | 0.00 | 4.0 | 0.006 | 0.88 | 0.0 | 0.05 | 16.61 | 0.01 | 1.053 | 35.76 | 3.00 | 11.3 | 88.3 | 0.4 | -2.45 | 2.98 | 0.83 | 0.80 | 0.79 | 34208 | 4192 | 20 | 75 | 2 | 0 | 0 | logfile |
✔ | 5GAF | 8002 | 2024-03-19 | 2015-11-25 | 4.3 | 4.42 | — | 4.3 | 0.007 | 1.09 | 1.0 | 0.05 | 23.65 | 0.01 | 1.266 | 8.87 | 11.04 | 3.5 | 96.4 | 0.1 | -3.28 | 0.63 | 0.64 | — | 4.3 | 0.004 | 0.66 | 0.0 | 0.03 | 22.68 | 0.01 | 1.057 | 18.83 | 0.03 | 4.3 | 95.5 | 0.2 | -0.84 | 2.00 | 0.71 | 0.84 | — | 96182 | 3889 | 47 | 3049 | 452 | 0 | 0 | logfile |