The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6KPJ | 0748 | 2023-07-06 | 2019-08-15 | 2.56 | 3.82 | — | 3.3 | 0.014 | 0.94 | 0.0 | 0.06 | 12.22 | 0.00 | 1.218 | 8.38 | 0.00 | 6.7 | 93.3 | 0.0 | -4.33 | 0.85 | 0.86 | 3.83 | 3.3 | 0.005 | 0.73 | 1.0 | 0.13 | 14.32 | 0.00 | 1.110 | 6.83 | 0.50 | 3.1 | 96.9 | 0.0 | 0.92 | 0.69 | 0.85 | 0.87 | 3.62 | 62845 | 3936 | 24 | 0 | 48 | 0 | 31225 | logfile |
✔ | 6TPQ | 10543 | 2023-07-16 | 2019-12-13 | 3.07 | 4.01 | — | 3.3 | 0.008 | 0.68 | 0.0 | 0.04 | 16.20 | 0.00 | 1.176 | 12.58 | 0.04 | 9.5 | 90.5 | 0.0 | -4.14 | 0.92 | 0.90 | 2.30 | 3.3 | 0.006 | 0.66 | 0.0 | 0.04 | 16.32 | 0.00 | 1.112 | 12.42 | 0.83 | 7.8 | 92.2 | 0.0 | -1.72 | 0.35 | 0.92 | 0.91 | 1.80 | 91728 | 3346 | 39 | 3047 | 222 | 0 | 0 | logfile |
✔ | 8EVU | 28637 | 2023-07-06 | 2022-10-20 | 2.5804 | 3.19 | 2.52 | 2.9 | 0.003 | 0.44 | 0.0 | 0.04 | 10.09 | 0.00 | 2.279 | 2.29 | 0.08 | 1.3 | 98.7 | 0.0 | 1.17 | 0.78 | 0.92 | 4.78 | 2.9 | 0.006 | 0.58 | 0.0 | 0.04 | 13.31 | 0.00 | 1.114 | 4.50 | 0.88 | 2.5 | 97.5 | 0.0 | 1.40 | 0.42 | 0.76 | 0.91 | 3.89 | 11902 | 1540 | 9 | 0 | 5 | 0 | 0 | logfile |
✔ | 7NSH | 12567 | 2023-07-05 | 2021-03-07 | 3.2 | 3.39 | 3.12 | 3.3 | 0.003 | 0.53 | 0.0 | 0.05 | 15.69 | 0.00 | 1.187 | 7.76 | 0.02 | 4.2 | 95.8 | 0.1 | 0.71 | 0.80 | 0.84 | 2.70 | 3.3 | 0.002 | 0.55 | 0.0 | 0.04 | 16.92 | 0.00 | 1.115 | 8.46 | 0.33 | 4.0 | 96.0 | 0.0 | 0.81 | 0.52 | 0.79 | 0.89 | 2.50 | 112448 | 9643 | 79 | 1611 | 229 | 2 | 0 | logfile |
✔ | 7N0C | 24103 | 2023-07-04 | 2021-05-25 | 3.4 | 3.71 | — | 3.7 | 0.009 | 1.00 | 0.0 | 0.05 | 13.78 | 0.01 | 2.180 | 6.79 | 0.00 | 1.3 | 98.7 | 0.0 | -3.80 | 0.72 | 0.80 | 2.48 | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 14.78 | 0.00 | 1.116 | 12.44 | 0.36 | 5.0 | 95.0 | 0.0 | -1.35 | 0.48 | 0.72 | 0.80 | 1.96 | 6088 | 644 | 6 | 49 | 7 | 1 | 0 | logfile |
✔ | 7XHA | 33192 | 2023-07-05 | 2022-04-07 | 3.35 | 3.57 | 3.29 | 3.5 | 0.008 | 1.06 | 4.0 | 0.07 | 11.41 | 0.01 | 1.860 | 7.27 | 0.28 | 4.7 | 95.2 | 0.1 | -3.53 | 0.69 | 0.78 | 2.40 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 15.15 | 0.00 | 1.117 | 8.85 | 0.19 | 3.7 | 96.3 | 0.0 | 0.52 | 1.24 | 0.72 | 0.82 | 2.12 | 10102 | 1270 | 5 | 0 | 3 | 0 | 0 | logfile |
✔ | 3J92 | 2832 | 2023-07-20 | 2014-12-02 | 3.6 | 3.74 | — | 3.7 | 0.010 | 1.59 | 52.0 | 0.11 | 21.53 | 0.01 | 1.186 | 15.75 | 18.87 | 11.1 | 85.7 | 3.2 | -3.22 | 0.79 | 0.74 | 0.42 | 3.7 | 0.004 | 0.75 | 0.0 | 0.04 | 18.76 | 0.01 | 1.122 | 15.15 | 0.52 | 7.2 | 92.3 | 0.4 | -1.51 | 1.12 | 0.86 | 0.86 | 1.69 | 146386 | 7246 | 65 | 4013 | 593 | 0 | 0 | logfile |
✔ | 7EN1 | 31199 | 2023-07-18 | 2021-04-15 | 3.47 | 3.85 | 3.42 | 3.6 | 0.013 | 1.97 | 7.0 | 0.10 | 15.10 | 0.02 | 1.796 | 0.83 | 1.72 | 5.2 | 94.6 | 0.3 | -2.33 | 0.86 | 0.77 | 2.39 | 3.6 | 0.003 | 0.65 | 0.0 | 0.04 | 15.13 | 0.00 | 1.126 | 13.65 | 0.10 | 5.0 | 95.0 | 0.0 | -0.21 | 0.80 | 0.86 | 0.79 | 2.02 | 40862 | 2656 | 4 | 0 | 8 | 0 | 20419 | logfile |
✔ | 6B6H | 7059 | 2023-07-11 | 2017-10-02 | 3.9 | 4.15 | — | 3.7 | 0.008 | 0.96 | 0.0 | 0.05 | 15.91 | 0.01 | 1.944 | 6.23 | 0.03 | 8.9 | 91.0 | 0.2 | -4.47 | 0.71 | 0.48 | 1.58 | 3.8 | 0.004 | 0.67 | 0.0 | 0.04 | 17.34 | 0.00 | 1.132 | 13.86 | 0.28 | 8.5 | 91.4 | 0.0 | -1.79 | 1.53 | 0.84 | 0.64 | 1.47 | 72070 | 4188 | 15 | 178 | 6 | 0 | 35400 | logfile |
✔ | 6oAA | 0666 | 2023-07-09 | 2019-03-15 | 4.1 | 4.22 | 4.19 | 4.2 | 0.006 | 1.06 | 1.0 | 0.05 | 16.65 | 0.01 | 1.317 | 13.46 | 0.34 | 8.3 | 91.5 | 0.3 | -5.52 | 0.63 | 0.70 | — | 4.2 | 0.003 | 0.85 | 0.0 | 0.05 | 15.49 | 0.00 | 1.132 | 14.72 | 0.00 | 9.4 | 90.4 | 0.1 | -2.19 | 0.88 | 0.66 | 0.75 | — | 19546 | 2494 | 10 | 0 | 14 | 0 | 0 | logfile |
✔ | 7oiG | 12929 | 2023-07-19 | 2021-05-11 | 3.2 | 3.93 | 3.16 | 3.0 | 0.011 | 1.03 | 0.0 | 0.06 | 14.40 | 0.02 | 1.449 | 8.53 | 0.21 | 3.6 | 96.2 | 0.1 | -3.86 | 0.88 | 0.85 | 2.63 | 3.0 | 0.005 | 0.73 | 0.0 | 0.04 | 15.28 | 0.01 | 1.135 | 15.25 | 0.81 | 4.0 | 96.0 | 0.0 | -0.10 | 1.61 | 0.91 | 0.90 | 2.19 | 145136 | 5738 | 68 | 4651 | 402 | 0 | 0 | logfile |
✔ | 6ZoL | 11322 | 2023-07-12 | 2020-07-07 | 2.8 | 3.00 | 2.78 | 2.9 | 0.003 | 0.55 | 0.0 | 0.04 | 14.47 | 0.00 | 1.309 | 4.02 | 1.49 | 3.0 | 97.0 | 0.0 | 0.69 | 0.75 | 0.87 | 3.29 | 3.0 | 0.003 | 0.57 | 0.0 | 0.04 | 16.43 | 0.00 | 1.136 | 5.15 | 2.57 | 3.1 | 96.9 | 0.0 | 0.64 | 3.08 | 0.76 | 0.88 | 2.77 | 25591 | 1944 | 22 | 472 | 59 | 0 | 0 | logfile |
✔ | 8G27 | 29678 | 2023-07-16 | 2023-02-03 | 3.3 | 3.75 | 3.55 | 3.7 | 0.003 | 0.59 | 7.0 | 0.07 | 14.86 | 0.00 | 1.501 | 5.09 | 0.05 | 5.2 | 94.6 | 0.2 | 0.80 | 0.68 | 0.83 | 1.69 | 3.7 | 0.003 | 0.61 | 6.0 | 0.07 | 15.49 | 0.00 | 1.139 | 4.86 | 0.05 | 5.9 | 93.9 | 0.2 | 0.70 | 1.02 | 0.69 | 0.86 | 1.89 | 34373 | 2157 | 9 | 3 | 21 | 2 | 16852 | logfile |
✔ | 3J9S | 6272 | 2023-07-05 | 2015-02-19 | 2.6 | 3.83 | — | 3.5 | 0.020 | 1.80 | 0.0 | 0.12 | 18.55 | 0.01 | 0.216 | 25.10 | 6.86 | 1.3 | 98.0 | 0.8 | 1.97 | 0.68 | 0.76 | 3.15 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 17.43 | 0.00 | 1.145 | 9.20 | 1.43 | 1.5 | 98.5 | 0.0 | 1.37 | 1.90 | 0.70 | 0.89 | 3.19 | 9813 | 1191 | 3 | 0 | 15 | 315 | 0 | logfile |
✔ | 7JMF | 22392 | 2023-07-08 | 2020-07-31 | 4.5 | 5.06 | — | 4.7 | 0.005 | 0.98 | 0.0 | 0.05 | 10.23 | 0.01 | 1.373 | 8.08 | 0.36 | 11.2 | 88.6 | 0.2 | -4.91 | 0.54 | 0.27 | — | 7.7 | 0.004 | 0.94 | 0.0 | 0.05 | 11.59 | 0.01 | 1.145 | 21.14 | 0.00 | 11.3 | 88.5 | 0.2 | -3.66 | 1.53 | 0.76 | 0.56 | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 7Y04 | 33537 | 2023-07-06 | 2022-06-03 | 3.5 | 4.03 | — | 4.0 | 0.004 | 0.76 | 0.0 | 0.04 | 15.69 | 0.00 | 2.217 | 6.36 | 0.75 | 4.7 | 95.3 | 0.0 | -2.60 | 0.57 | 0.66 | 2.70 | 4.0 | 0.003 | 0.62 | 0.0 | 0.04 | 16.45 | 0.00 | 1.145 | 6.40 | 0.52 | 4.0 | 96.0 | 0.0 | -1.50 | 1.57 | 0.63 | 0.73 | 2.32 | 12050 | 1475 | 7 | 0 | 4 | 0 | 0 | logfile |
✔ | 7NWT | 12635 | 2023-07-26 | 2021-03-17 | 2.66 | 2.63 | — | 2.6 | 0.011 | 0.84 | 0.0 | 0.05 | 14.14 | 0.02 | 1.145 | 4.87 | 2.95 | 2.6 | 97.4 | 0.0 | -2.35 | 0.85 | 0.88 | 4.38 | 2.7 | 0.002 | 0.65 | 0.0 | 0.04 | 15.17 | 0.01 | 1.149 | 8.11 | 2.80 | 3.2 | 96.8 | 0.0 | 0.13 | 0.28 | 0.87 | 0.88 | 3.51 | 149932 | 6355 | 74 | 4641 | 439 | 2 | 0 | logfile |
✔ | 6GYS | 0096 | 2023-07-17 | 2018-07-01 | 4.4 | 5.08 | — | 4.4 | 0.008 | 1.12 | 0.0 | 0.06 | 15.13 | 0.01 | 0.873 | 14.94 | 0.56 | 10.8 | 89.1 | 0.1 | -4.13 | 0.92 | 0.82 | — | 4.4 | 0.006 | 0.82 | 0.0 | 0.04 | 15.64 | 0.01 | 1.149 | 29.08 | 0.00 | 10.6 | 89.3 | 0.0 | -1.57 | 1.29 | 0.93 | 0.83 | — | 38890 | 4441 | 16 | 104 | 8 | 0 | 0 | logfile |
✔ | 7BoH | 12243 | 2023-07-20 | 2021-01-25 | 2.82 | 3.09 | 2.90 | 2.8 | 0.006 | 0.62 | 4.0 | 0.04 | 13.86 | 0.02 | 0.657 | 6.27 | 0.00 | 3.3 | 96.7 | 0.0 | -1.47 | 0.82 | 0.80 | 2.52 | 2.8 | 0.007 | 0.74 | 0.0 | 0.04 | 15.09 | 0.01 | 1.151 | 13.60 | 2.33 | 4.1 | 95.9 | 0.0 | -0.12 | 1.22 | 0.87 | 0.90 | 2.24 | 52154 | 2445 | 25 | 1527 | 157 | 0 | 0 | logfile |
✔ | 6QC3 | 4495 | 2023-07-17 | 2018-12-26 | 4.2 | 4.28 | 4.21 | 4.2 | 0.010 | 1.32 | 1.0 | 0.85 | 12.09 | 0.01 | 1.873 | 8.18 | 0.75 | 11.7 | 88.1 | 0.1 | -3.94 | 0.67 | 0.75 | — | 4.2 | 0.008 | 1.49 | 0.0 | 0.26 | 13.53 | 0.01 | 1.159 | 18.23 | 0.10 | 10.5 | 89.5 | 0.0 | -1.30 | 1.75 | 0.69 | 0.78 | — | 96897 | 12010 | 84 | 0 | 77 | 0 | 0 | logfile |