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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5LMT | 4079 | 2023-12-08 | 2016-08-01 | 4.15 | 4.33 | 4.20 | 4.2 | 0.008 | 1.43 | 21.0 | 0.12 | 26.19 | 0.02 | 1.290 | 18.78 | 22.35 | 11.9 | 84.8 | 3.3 | -2.73 | 0.77 | 0.76 | — | 4.1 | 0.006 | 0.82 | 0.0 | 0.04 | 23.54 | 0.01 | 1.786 | 31.12 | 0.00 | 9.3 | 90.3 | 0.4 | -1.73 | 0.90 | 0.80 | 0.84 | — | 55776 | 2622 | 31 | 1612 | 88 | 0 | 0 | logfile |
✔ | 5AJ3 | 2913 | 2023-12-10 | 2015-02-20 | 3.6 | 3.73 | — | 3.7 | 0.018 | 1.28 | 0.0 | 0.05 | 21.25 | 0.07 | 1.844 | 24.00 | 10.71 | 3.9 | 96.0 | 0.1 | -3.65 | 0.86 | 0.86 | 2.03 | 3.6 | 0.005 | 1.41 | 0.0 | 0.04 | 21.41 | 0.02 | 1.787 | 16.20 | 0.59 | 4.7 | 95.3 | 0.0 | 0.15 | 1.63 | 0.84 | 0.82 | 1.57 | 66363 | 4665 | 44 | 1102 | 1006 | 118 | 0 | logfile |
✔ | 6KQo | 0754 | 2023-12-09 | 2019-08-18 | 2.52 | 3.75 | — | 3.2 | 0.019 | 1.16 | 0.0 | 0.07 | 16.22 | 0.00 | 1.883 | 10.69 | 0.03 | 9.4 | 90.6 | 0.0 | -5.07 | 0.87 | 0.85 | 3.52 | 3.3 | 0.005 | 0.75 | 1.0 | 0.12 | 15.06 | 0.00 | 1.787 | 8.86 | 0.78 | 3.9 | 96.1 | 0.0 | 0.03 | 1.67 | 0.85 | 0.84 | 3.08 | 63373 | 3936 | 24 | 0 | 48 | 0 | 31225 | logfile |
✔ | 7Ao8 | 11837 | 2023-12-09 | 2020-10-14 | 4.5 | 5.23 | 4.51 | 3.6 | 0.011 | 1.51 | 8.0 | 0.26 | 17.19 | 0.01 | 1.219 | 8.80 | 4.18 | 6.9 | 92.5 | 0.6 | -3.46 | 0.62 | 0.31 | — | 3.6 | 0.005 | 0.81 | 0.0 | 0.04 | 14.25 | 0.00 | 1.787 | 28.65 | 0.00 | 6.8 | 93.2 | 0.0 | -1.38 | 2.65 | 0.85 | 0.73 | — | 10905 | 1350 | 9 | 0 | 8 | 0 | 0 | logfile |
✔ | 8GS8 | 34225 | 2023-12-08 | 2022-09-05 | 2.86 | 3.07 | 2.83 | 3.1 | 0.032 | 1.67 | 0.0 | 0.52 | 14.96 | 0.01 | 2.168 | 12.06 | 0.67 | 7.9 | 92.1 | 0.1 | -4.22 | 0.62 | 0.84 | 3.93 | 3.1 | 0.003 | 1.06 | 0.0 | 0.06 | 16.06 | 0.00 | 1.788 | 8.91 | 0.78 | 2.0 | 98.0 | 0.0 | 0.87 | 1.11 | 0.62 | 0.86 | 3.54 | 8637 | 1090 | 8 | 0 | 7 | 0 | 0 | logfile |
✔ | 6K1P | 9719 | 2023-12-10 | 2019-05-10 | 3.87 | 4.09 | — | 4.0 | 0.010 | 1.03 | 0.0 | 0.06 | 24.90 | 0.01 | 1.838 | 5.33 | 0.10 | 8.5 | 90.9 | 0.6 | -4.45 | 0.75 | 0.82 | 2.45 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 25.33 | 0.00 | 1.788 | 8.48 | 0.38 | 6.0 | 94.0 | 0.0 | 0.07 | 1.24 | 0.75 | 0.82 | 0.99 | 15841 | 1230 | 11 | 292 | 3 | 0 | 0 | logfile |
✔ | 5LMU | 4080 | 2023-12-08 | 2016-08-01 | 4.0 | 4.12 | 4.00 | 4.0 | 0.008 | 1.44 | 43.0 | 0.12 | 26.67 | 0.02 | 1.289 | 21.15 | 25.30 | 12.0 | 84.2 | 3.8 | -2.57 | 0.73 | 0.78 | — | 4.0 | 0.005 | 0.82 | 0.0 | 0.04 | 24.23 | 0.01 | 1.789 | 27.69 | 1.03 | 8.6 | 90.8 | 0.6 | -1.71 | 0.88 | 0.76 | 0.83 | — | 55195 | 2550 | 29 | 1612 | 82 | 0 | 0 | logfile |
✔ | 8DMF | 27535 | 2023-12-07 | 2022-07-08 | 4.0 | 4.71 | 3.73 | 4.1 | 0.003 | 0.64 | 0.0 | 0.05 | 14.28 | 0.00 | 1.977 | 13.96 | 0.00 | 5.0 | 95.0 | 0.0 | -0.20 | 0.81 | 0.83 | — | 4.1 | 0.006 | 0.81 | 0.0 | 0.05 | 15.98 | 0.00 | 1.789 | 24.74 | 0.16 | 7.0 | 93.0 | 0.0 | -0.76 | 1.16 | 0.82 | 0.84 | — | 5670 | 718 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7M4U | 23666 | 2023-12-07 | 2021-03-22 | 2.71 | 1.78 | — | 1.6 | 0.006 | 0.58 | 2.0 | 0.04 | 21.77 | 0.02 | 1.771 | 4.42 | 0.20 | 3.1 | 96.7 | 0.2 | 1.08 | 0.79 | 0.76 | 3.70 | 1.6 | 0.003 | 0.69 | 0.0 | 0.04 | 21.97 | 0.01 | 1.791 | 5.90 | 2.00 | 3.2 | 96.5 | 0.2 | 0.89 | 0.91 | 0.82 | 0.81 | 3.51 | 51764 | 2386 | 27 | 1528 | 84 | 191 | 0 | logfile |
✔ | 6S6S | 10104 | 2023-12-08 | 2019-07-03 | 3.9 | 4.02 | 4.04 | 3.9 | 0.023 | 0.97 | 0.0 | 0.08 | 13.25 | 0.00 | 1.660 | 8.49 | 0.00 | 5.4 | 94.6 | 0.0 | -3.05 | 0.72 | 0.84 | 1.45 | 3.9 | 0.003 | 0.81 | 0.0 | 0.05 | 15.49 | 0.00 | 1.791 | 9.63 | 0.14 | 4.4 | 95.6 | 0.0 | -0.63 | 3.23 | 0.73 | 0.84 | 1.36 | 60044 | 7752 | 16 | 0 | 20 | 0 | 0 | logfile |
✔ | 8TJU | 41311 | 2023-12-09 | 2023-07-24 | 3.46 | 4.75 | 3.48 | 3.4 | 0.006 | 0.67 | 0.0 | 0.04 | 24.42 | 0.01 | 1.874 | 27.33 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.93 | 0.86 | — | 3.4 | 0.008 | 0.70 | 0.0 | 0.04 | 23.90 | 0.01 | 1.792 | 28.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.43 | 0.94 | 0.91 | — | 8771 | 0 | 2 | 409 | 27 | 0 | 0 | logfile |
✔ | 7LCN | 23277 | 2023-12-10 | 2021-01-11 | 3.35 | 3.96 | — | 3.5 | 0.014 | 1.95 | 26.0 | 0.12 | 13.95 | 0.02 | 2.509 | 0.43 | 2.55 | 9.4 | 89.0 | 1.6 | -2.18 | 0.83 | 0.73 | 2.09 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 14.03 | 0.00 | 1.794 | 8.11 | 0.19 | 7.8 | 91.8 | 0.4 | -1.49 | 0.69 | 0.84 | 0.75 | 1.83 | 66313 | 4296 | 27 | 0 | 63 | 0 | 32245 | logfile |
✔ | 7Z2A | 14459 | 2023-12-09 | 2022-02-26 | 4.3 | 4.49 | — | 4.3 | 0.012 | 1.59 | 2.0 | 0.09 | 14.75 | 0.01 | 0.925 | 8.38 | 0.48 | 2.8 | 97.0 | 0.2 | 0.00 | 0.80 | 0.62 | — | 4.2 | 0.004 | 0.61 | 0.0 | 0.04 | 14.33 | 0.00 | 1.794 | 59.65 | 0.00 | 5.2 | 94.7 | 0.1 | 0.19 | 1.82 | 0.90 | 0.80 | — | 12244 | 1201 | 5 | 0 | 4 | 0 | 2765 | logfile |
✔ | 7SAM | 24952 | 2023-12-07 | 2021-09-22 | 4.3 | 6.95 | 4.38 | 4.2 | 0.001 | 0.39 | 0.0 | 0.02 | 22.03 | 0.00 | 1.952 | 2.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.84 | 0.51 | — | 4.3 | 0.007 | 0.90 | 0.0 | 0.04 | 27.59 | 0.01 | 1.795 | 82.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 5.58 | 0.96 | 0.87 | — | 5399 | 0 | 1 | 169 | 0 | 0 | 1802 | logfile |
✔ | 7X8R | 33057 | 2023-12-08 | 2022-03-14 | 2.61 | 2.75 | — | 2.8 | 0.025 | 0.73 | 0.0 | 0.08 | 14.29 | 0.00 | 2.201 | 7.50 | 0.00 | 3.1 | 96.9 | 0.0 | 0.83 | 0.67 | 0.80 | 3.43 | 2.8 | 0.005 | 0.69 | 0.0 | 0.05 | 17.05 | 0.00 | 1.795 | 6.13 | 1.54 | 3.5 | 96.5 | 0.0 | 1.01 | 0.32 | 0.70 | 0.84 | 3.05 | 8493 | 1051 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7LJF | 23392 | 2023-12-11 | 2021-01-29 | 4.0 | 4.34 | — | 4.2 | 0.003 | 0.62 | 0.0 | 0.04 | 13.98 | 0.00 | 1.987 | 14.43 | 0.41 | 3.4 | 96.6 | 0.0 | 0.00 | 0.83 | 0.80 | — | 4.2 | 0.004 | 0.68 | 0.0 | 0.04 | 15.58 | 0.00 | 1.796 | 18.61 | 0.24 | 4.6 | 95.4 | 0.0 | -0.09 | 0.36 | 0.83 | 0.81 | — | 15742 | 2007 | 9 | 0 | 6 | 0 | 0 | logfile |
✔ | 7W4P | 32311 | 2023-12-08 | 2021-11-28 | 3.19 | 2.52 | — | 3.2 | 0.006 | 0.75 | 0.0 | 0.05 | 12.28 | 0.01 | 2.166 | 4.69 | 2.18 | 2.8 | 97.1 | 0.1 | -0.24 | 0.80 | 0.80 | 2.05 | 3.1 | 0.007 | 0.68 | 0.0 | 0.05 | 14.62 | 0.00 | 1.796 | 10.00 | 0.43 | 3.3 | 96.6 | 0.1 | 1.28 | 1.97 | 0.81 | 0.84 | 2.36 | 54408 | 6904 | 16 | 0 | 24 | 0 | 0 | logfile |
✔ | 8QA4 | 18298 | 2023-12-08 | 2023-08-22 | 2.8 | 2.99 | 2.83 | 3.0 | 0.023 | 2.29 | 24.0 | 0.20 | 15.90 | 0.01 | 2.296 | 3.62 | 1.45 | 3.5 | 96.5 | 0.0 | -2.38 | 0.63 | 0.78 | 3.60 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 17.43 | 0.00 | 1.796 | 10.32 | 0.24 | 2.9 | 97.1 | 0.0 | -0.59 | 1.07 | 0.60 | 0.80 | 2.86 | 7506 | 462 | 6 | 0 | 0 | 28 | 3686 | logfile |
✔ | 6WRF | 21882 | 2023-12-07 | 2020-04-29 | 3.14 | 3.69 | — | 3.5 | 0.011 | 0.86 | 0.0 | 0.05 | 13.56 | 0.01 | 1.975 | 3.32 | 0.07 | 1.0 | 99.0 | 0.0 | -0.92 | 0.77 | 0.73 | 3.20 | 3.5 | 0.003 | 0.53 | 0.0 | 0.04 | 14.91 | 0.00 | 1.797 | 6.90 | 0.10 | 4.2 | 95.8 | 0.0 | 0.79 | 0.61 | 0.74 | 0.80 | 2.62 | 53851 | 3450 | 27 | 0 | 11 | 7 | 27016 | logfile |
✔ | 6PDY | 20319 | 2023-12-10 | 2019-06-19 | 3.7 | 3.98 | — | 3.8 | 0.004 | 0.80 | 0.0 | 0.05 | 11.28 | 0.01 | 1.416 | 47.70 | 0.65 | 10.8 | 89.1 | 0.1 | -4.29 | 0.82 | 0.76 | 1.65 | 3.8 | 0.003 | 0.91 | 0.0 | 0.05 | 14.81 | 0.01 | 1.797 | 17.79 | 0.36 | 10.7 | 89.3 | 0.0 | -2.09 | 0.89 | 0.83 | 0.78 | 1.16 | 13096 | 1650 | 12 | 0 | 23 | 0 | 0 | logfile |