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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7JZY | 22584 | 2022-04-07 | 2020-09-02 | 3.6 | 3.61 | — | 3.6 | 0.009 | 0.96 | 0.0 | 0.05 | 16.34 | 0.01 | 2.236 | 5.56 | 0.85 | 7.0 | 93.0 | 0.0 | -3.78 | 0.81 | 0.85 | 2.54 | 3.5 | 0.006 | 0.89 | 1.0 | 0.04 | 17.32 | 0.00 | 1.653 | 12.31 | 0.09 | 5.9 | 94.1 | 0.0 | -0.96 | 0.49 | 0.81 | 0.84 | 2.12 | 24539 | 3024 | 12 | 61 | 0 | 0 | 0 | logfile |
✔ | 7PE9 | 13349 | 2022-04-08 | 2021-08-09 | 3.7 | 4.12 | — | 3.9 | 0.003 | 0.55 | 0.0 | 0.04 | 14.29 | 0.00 | 2.250 | 6.21 | 1.33 | 3.7 | 96.3 | 0.0 | -0.63 | 0.81 | 0.81 | 1.47 | 3.9 | 0.007 | 0.80 | 1.0 | 0.04 | 15.68 | 0.00 | 2.166 | 9.35 | 0.10 | 3.7 | 96.3 | 0.0 | 0.73 | 1.72 | 0.82 | 0.83 | 1.04 | 31076 | 4043 | 8 | 0 | 3 | 0 | 0 | logfile |
✔ | 7VH1 | 31983 | 2022-04-05 | 2021-09-20 | 4.2 | 4.15 | — | 4.0 | 0.009 | 1.32 | 0.0 | 0.07 | 12.24 | 0.01 | 2.222 | 5.93 | 0.74 | 11.9 | 87.8 | 0.2 | -5.32 | 0.79 | 0.75 | — | 4.0 | 0.003 | 0.74 | 0.0 | 0.04 | 12.70 | 0.00 | 2.140 | 10.71 | 0.00 | 8.8 | 91.2 | 0.0 | -1.93 | 3.32 | 0.79 | 0.75 | — | 13156 | 1661 | 2 | 0 | 2 | 0 | 0 | logfile |
✔ | 7LG6 | 23312 | 2022-04-07 | 2021-01-19 | 3.28 | 3.65 | 3.42 | 3.6 | 0.022 | 1.77 | 0.0 | 0.13 | 10.12 | 0.01 | 2.421 | 0.61 | 0.33 | 3.6 | 95.7 | 0.7 | 0.39 | 0.76 | 0.84 | 3.99 | 3.5 | 0.004 | 0.68 | 0.0 | 0.04 | 13.86 | 0.00 | 2.127 | 6.97 | 0.22 | 6.6 | 93.2 | 0.2 | 0.24 | 1.27 | 0.73 | 0.84 | 3.09 | 26550 | 3153 | 66 | 0 | 135 | 0 | 0 | logfile |
✔ | 7EG4 | 31105 | 2022-04-05 | 2021-03-24 | 3.2 | 3.21 | — | 3.3 | 0.012 | 1.11 | 0.0 | 0.04 | 14.65 | 0.00 | 1.920 | 16.83 | 0.12 | 12.9 | 87.1 | 0.0 | -3.12 | 0.78 | 0.84 | 3.02 | 3.3 | 0.005 | 0.73 | 0.0 | 0.04 | 15.92 | 0.00 | 1.953 | 7.71 | 0.24 | 9.5 | 90.5 | 0.0 | -0.31 | 0.49 | 0.77 | 0.84 | 2.47 | 15258 | 1878 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7VH3 | 31985 | 2022-04-05 | 2021-09-20 | 3.6 | 3.70 | — | 3.7 | 0.005 | 1.09 | 0.0 | 0.06 | 11.49 | 0.01 | 2.257 | 7.95 | 0.90 | 8.5 | 91.0 | 0.4 | -4.84 | 0.68 | 0.69 | 1.85 | 3.6 | 0.012 | 1.01 | 1.0 | 0.04 | 15.37 | 0.00 | 2.179 | 13.86 | 0.28 | 8.1 | 91.8 | 0.1 | -1.27 | 1.65 | 0.70 | 0.73 | 1.34 | 12749 | 1612 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PEC | 13352 | 2022-04-08 | 2021-08-09 | 4.24 | 4.75 | — | 4.4 | 0.002 | 0.49 | 0.0 | 0.04 | 14.50 | 0.00 | 2.238 | 5.33 | 4.99 | 4.6 | 95.4 | 0.0 | -1.94 | 0.73 | 0.78 | — | 4.4 | 0.003 | 0.67 | 0.0 | 0.04 | 13.43 | 0.00 | 2.088 | 13.53 | 0.00 | 3.3 | 96.7 | 0.1 | 0.43 | 0.93 | 0.74 | 0.79 | — | 30911 | 3822 | 5 | 0 | 57 | 0 | 0 | logfile |
✔ | 7E3L | 30983 | 2022-04-08 | 2021-02-09 | 3.6 | 4.10 | — | 3.6 | 0.006 | 0.87 | 4.0 | 0.05 | 13.31 | 0.01 | 2.193 | 9.04 | 0.32 | 8.9 | 91.0 | 0.1 | -2.95 | 0.68 | 0.53 | 2.26 | 3.7 | 0.003 | 0.65 | 0.0 | 0.04 | 14.71 | 0.00 | 2.012 | 9.54 | 0.06 | 4.4 | 95.6 | 0.0 | -0.32 | 0.76 | 0.85 | 0.86 | 2.09 | 32639 | 4266 | 12 | 0 | 20 | 0 | 0 | logfile |
✔ | 7FD8 | 31536 | 2022-04-05 | 2021-07-16 | 3.8 | 3.98 | 3.73 | 3.6 | 0.008 | 1.41 | 2.0 | 0.11 | 11.94 | 0.00 | 2.327 | 5.06 | 0.61 | 8.6 | 91.3 | 0.1 | -2.25 | 0.73 | 0.82 | 2.28 | 3.6 | 0.003 | 0.65 | 0.0 | 0.04 | 13.67 | 0.00 | 2.145 | 12.10 | 0.15 | 4.9 | 95.1 | 0.0 | 0.08 | 0.61 | 0.73 | 0.84 | 2.07 | 12152 | 1528 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 7M1Q | 23618 | 2022-04-05 | 2021-03-14 | 2.92 | 3.52 | — | 3.3 | 0.003 | 0.94 | 0.0 | 0.04 | 13.55 | 0.00 | 2.049 | 8.24 | 0.08 | 7.6 | 92.2 | 0.2 | 0.03 | 0.72 | 0.83 | 2.79 | 3.2 | 0.004 | 0.77 | 0.0 | 0.04 | 14.22 | 0.00 | 1.971 | 8.20 | 1.16 | 7.9 | 92.0 | 0.1 | 0.15 | 0.28 | 0.72 | 0.85 | 2.58 | 13780 | 1911 | 4 | 0 | 16 | 0 | 0 | logfile |
✔ | 7oTQ | 13065 | 2022-04-07 | 2021-06-10 | 4.8 | 5.78 | 4.82 | 5.0 | 0.004 | 0.76 | 0.0 | 0.05 | 24.91 | 0.01 | 2.055 | 6.93 | 1.26 | 4.1 | 95.5 | 0.4 | -1.44 | 0.84 | 0.78 | — | 5.0 | 0.004 | 0.66 | 0.0 | 0.04 | 24.93 | 0.00 | 1.986 | 14.28 | 0.00 | 3.3 | 96.5 | 0.2 | 0.47 | 1.50 | 0.85 | 0.78 | — | 29140 | 1214 | 11 | 298 | 0 | 0 | 13365 | logfile |
✔ | 7EG0 | 31103 | 2022-04-05 | 2021-03-23 | 3.4 | 3.09 | — | 3.3 | 0.015 | 1.13 | 0.0 | 0.05 | 14.94 | 0.00 | 1.975 | 20.60 | 0.12 | 13.9 | 86.0 | 0.1 | -2.98 | 0.74 | 0.79 | 2.89 | 3.3 | 0.003 | 0.63 | 0.0 | 0.04 | 16.59 | 0.00 | 1.988 | 8.14 | 0.30 | 9.3 | 90.7 | 0.0 | -0.20 | 2.08 | 0.77 | 0.82 | 2.70 | 15246 | 1878 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7PKP | 13476 | 2022-04-06 | 2021-08-26 | 3.1 | 3.25 | — | 3.2 | 0.008 | 0.69 | 0.0 | 0.04 | 14.18 | 0.00 | 2.238 | 15.25 | 0.00 | 8.7 | 91.3 | 0.0 | -4.06 | 0.76 | 0.83 | 2.79 | 3.2 | 0.004 | 0.54 | 0.0 | 0.04 | 16.10 | 0.00 | 2.301 | 7.67 | 0.09 | 6.8 | 93.2 | 0.0 | -0.89 | 1.15 | 0.72 | 0.82 | 2.77 | 20360 | 2504 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PKo | 13474 | 2022-04-06 | 2021-08-26 | 3.9 | 4.01 | — | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 14.59 | 0.00 | 2.205 | 10.80 | 0.00 | 7.5 | 92.5 | 0.0 | -4.16 | 0.76 | 0.82 | 2.59 | 3.9 | 0.003 | 0.65 | 0.0 | 0.04 | 16.17 | 0.00 | 2.200 | 11.51 | 0.66 | 5.3 | 94.7 | 0.0 | -0.75 | 0.64 | 0.75 | 0.81 | 2.23 | 20368 | 2504 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MC0 | 23752 | 2022-04-04 | 2021-04-01 | 3.3 | 3.73 | — | 3.7 | 0.012 | 1.62 | 8.0 | 0.10 | 12.73 | 0.01 | 1.925 | 7.84 | 1.19 | 3.9 | 95.8 | 0.3 | -0.86 | 0.65 | 0.81 | 2.48 | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 14.66 | 0.00 | 2.209 | 5.84 | 0.13 | 3.9 | 96.1 | 0.0 | 0.90 | 1.05 | 0.65 | 0.82 | 2.10 | 7092 | 931 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PE8 | 13348 | 2022-04-07 | 2021-08-09 | 3.2 | 3.51 | — | 3.4 | 0.002 | 0.41 | 0.0 | 0.04 | 8.71 | 0.00 | 2.255 | 4.45 | 1.65 | 3.2 | 96.8 | 0.0 | -0.20 | 0.79 | 0.81 | 2.75 | 3.4 | 0.002 | 0.52 | 0.0 | 0.04 | 12.70 | 0.00 | 2.206 | 7.04 | 0.17 | 3.6 | 96.4 | 0.0 | 0.72 | 0.49 | 0.80 | 0.83 | 1.84 | 29291 | 3832 | 8 | 0 | 3 | 0 | 0 | logfile |
✔ | 7PEB | 13351 | 2022-04-07 | 2021-08-09 | 3.67 | 4.11 | — | 3.9 | 0.002 | 0.52 | 0.0 | 0.04 | 13.94 | 0.00 | 2.245 | 4.50 | 2.69 | 5.1 | 94.9 | 0.1 | -2.66 | 0.71 | 0.73 | 1.45 | 3.9 | 0.003 | 0.71 | 0.0 | 0.04 | 15.49 | 0.00 | 2.078 | 11.11 | 0.41 | 3.6 | 96.4 | 0.0 | 0.89 | 2.13 | 0.72 | 0.75 | 1.13 | 29140 | 3611 | 5 | 0 | 57 | 0 | 0 | logfile |
✔ | 7PEA | 13350 | 2022-04-04 | 2021-08-09 | 4.07 | 4.50 | — | 4.2 | 0.002 | 0.47 | 0.0 | 0.04 | 14.27 | 0.00 | 2.239 | 3.97 | 4.24 | 4.7 | 95.3 | 0.0 | -2.53 | 0.84 | 0.72 | — | 4.2 | 0.003 | 0.65 | 0.0 | 0.04 | 13.42 | 0.00 | 2.142 | 11.58 | 0.00 | 3.4 | 96.6 | 0.0 | 0.63 | 1.51 | 0.86 | 0.77 | — | 58252 | 7222 | 10 | 0 | 114 | 0 | 0 | logfile |
✔ | 7M65 | 23689 | 2022-04-04 | 2021-03-25 | 4.1 | 4.11 | — | 4.3 | 0.009 | 1.40 | 0.0 | 0.10 | 12.05 | 0.00 | 2.392 | 33.63 | 0.00 | 17.6 | 82.4 | 0.0 | -6.09 | 0.52 | 0.73 | — | 4.2 | 0.005 | 0.96 | 0.0 | 0.05 | 12.00 | 0.00 | 2.126 | 25.73 | 0.00 | 17.3 | 82.7 | 0.0 | -6.33 | 4.44 | 0.52 | 0.73 | — | 2025 | 275 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 7M62 | 23687 | 2022-04-04 | 2021-03-25 | 3.9 | 3.91 | — | 4.3 | 0.007 | 1.13 | 0.0 | 0.07 | 14.83 | 0.00 | 2.321 | 32.83 | 0.00 | 23.3 | 76.7 | 0.0 | -4.97 | 0.55 | 0.62 | 2.27 | 4.3 | 0.003 | 0.99 | 0.0 | 0.05 | 15.87 | 0.00 | 2.105 | 21.17 | 0.00 | 22.7 | 77.3 | 0.0 | -4.56 | 2.11 | 0.57 | 0.65 | 3.17 | 2380 | 320 | 10 | 0 | 10 | 0 | 0 | logfile |