The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8E2i | 27837 | 2023-11-21 | 2022-08-15 | 3.04 | 3.45 | 3.37 | 3.1 | 0.004 | 0.60 | 0.0 | 0.04 | 15.47 | 0.00 | 1.925 | 7.78 | 0.83 | 1.8 | 98.2 | 0.0 | 1.23 | 0.64 | 0.64 | 1.06 | 3.2 | 0.003 | 0.61 | 0.0 | 0.04 | 15.97 | 0.00 | 1.939 | 12.77 | 0.31 | 3.4 | 96.6 | 0.0 | 0.90 | 0.87 | 0.65 | 0.66 | 0.98 | 92676 | 5836 | 6 | 0 | 114 | 0 | 46502 | logfile |
✔ | 8F4N | 28855 | 2023-11-16 | 2022-11-11 | 2.95 | 3.15 | 3.04 | 3.2 | 0.004 | 0.55 | 0.0 | 0.04 | 9.96 | 0.00 | 2.278 | 8.28 | 2.12 | 1.9 | 98.1 | 0.0 | 2.00 | 0.72 | 0.80 | 3.23 | 3.2 | 0.003 | 0.54 | 0.0 | 0.04 | 15.74 | 0.00 | 2.085 | 9.21 | 2.18 | 1.4 | 98.6 | 0.0 | 2.01 | 1.26 | 0.69 | 0.85 | 2.77 | 15574 | 2043 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LKP | 23409 | 2023-11-16 | 2021-02-02 | 3.27 | 3.86 | — | 3.8 | 0.006 | 0.99 | 0.0 | 0.53 | 16.73 | 0.01 | 1.954 | 19.44 | 0.60 | 5.7 | 94.3 | 0.1 | -0.89 | 0.62 | 0.74 | 1.42 | 3.8 | 0.003 | 0.85 | 0.0 | 0.08 | 17.16 | 0.00 | 2.139 | 9.28 | 0.30 | 4.2 | 95.7 | 0.1 | 0.10 | 1.19 | 0.73 | 0.83 | 1.78 | 15789 | 1941 | 4 | 0 | 29 | 0 | 0 | logfile |
✔ | 6XCN | 22128 | 2023-11-20 | 2020-06-08 | 3.66 | 3.89 | — | 3.7 | 0.011 | 0.93 | 0.0 | 0.05 | 14.04 | 0.00 | 2.117 | 15.06 | 1.08 | 10.2 | 89.8 | 0.0 | -4.10 | 0.78 | 0.87 | 2.22 | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 15.07 | 0.00 | 2.151 | 9.06 | 0.23 | 5.1 | 94.9 | 0.0 | -0.94 | 1.01 | 0.77 | 0.86 | 1.61 | 28662 | 3636 | 27 | 0 | 60 | 0 | 0 | logfile |
✔ | 6KoU | 0740 | 2023-11-15 | 2019-08-13 | 2.43 | 3.57 | — | 3.0 | 0.004 | 0.67 | 1.0 | 0.13 | 11.88 | 0.00 | 2.006 | 4.07 | 0.00 | 3.0 | 97.0 | 0.0 | -4.12 | 0.85 | 0.88 | 4.03 | 3.1 | 0.004 | 0.73 | 2.0 | 0.13 | 13.99 | 0.00 | 2.051 | 6.52 | 0.22 | 3.7 | 96.3 | 0.0 | 0.93 | 1.08 | 0.85 | 0.89 | 3.84 | 62209 | 3936 | 24 | 0 | 24 | 0 | 31225 | logfile |
✔ | 8F56 | 28861 | 2023-11-16 | 2022-11-11 | 2.98 | 3.18 | 3.09 | 3.2 | 0.004 | 0.56 | 0.0 | 0.04 | 9.89 | 0.00 | 2.200 | 9.91 | 2.64 | 2.2 | 97.8 | 0.0 | 1.81 | 0.68 | 0.75 | 1.96 | 3.2 | 0.003 | 0.58 | 0.0 | 0.04 | 16.16 | 0.00 | 2.177 | 10.36 | 3.00 | 1.8 | 98.2 | 0.0 | 1.79 | 1.29 | 0.70 | 0.86 | 2.19 | 15631 | 2039 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7B7U | 12087 | 2023-11-19 | 2020-12-11 | 2.8 | 3.48 | 2.70 | 3.0 | 0.002 | 0.59 | 0.0 | 0.04 | 13.41 | 0.00 | 2.012 | 10.30 | 0.07 | 4.8 | 95.2 | 0.0 | 0.52 | 0.85 | 0.83 | 2.14 | 3.1 | 0.004 | 0.73 | 0.0 | 0.05 | 15.90 | 0.00 | 1.952 | 14.11 | 1.74 | 5.7 | 94.3 | 0.0 | 0.35 | 0.53 | 0.86 | 0.86 | 2.15 | 25091 | 3106 | 17 | 0 | 36 | 0 | 0 | logfile |
✔ | 7R1F | 14240 | 2023-11-17 | 2022-02-02 | 2.58 | 3.46 | 2.66 | 2.8 | 0.009 | 0.62 | 0.0 | 0.04 | 12.26 | 0.00 | 2.035 | 6.90 | 2.31 | 3.5 | 96.5 | 0.0 | 0.37 | 0.91 | 0.84 | 3.29 | 2.9 | 0.003 | 0.66 | 0.0 | 0.04 | 13.87 | 0.00 | 2.021 | 9.54 | 1.52 | 2.8 | 97.2 | 0.0 | 0.77 | 2.67 | 0.92 | 0.90 | 3.30 | 18372 | 2177 | 11 | 44 | 4 | 6 | 0 | logfile |
✔ | 7oJ5 | 12938 | 2023-11-21 | 2021-05-13 | 2.4 | 2.43 | — | 2.4 | 0.002 | 0.53 | 0.0 | 0.04 | 16.61 | 0.00 | 2.177 | 1.81 | 1.95 | 1.6 | 98.4 | 0.0 | -0.94 | 0.76 | 0.87 | 3.97 | 2.4 | 0.005 | 0.88 | 0.0 | 0.05 | 16.82 | 0.00 | 2.107 | 2.91 | 1.30 | 3.3 | 96.7 | 0.0 | 0.56 | 0.34 | 0.78 | 0.89 | 4.57 | 35323 | 4416 | 72 | 0 | 48 | 931 | 0 | logfile |
✔ | 7K8W | 22733 | 2023-11-19 | 2020-09-27 | 3.6 | 4.04 | — | 3.9 | 0.008 | 1.05 | 2.0 | 0.06 | 12.60 | 0.01 | 1.483 | 19.55 | 0.26 | 6.1 | 93.8 | 0.1 | -1.54 | 0.73 | 0.74 | 1.34 | 3.9 | 0.003 | 0.69 | 0.0 | 0.05 | 14.58 | 0.00 | 2.068 | 12.58 | 0.51 | 5.2 | 94.8 | 0.0 | -0.41 | 1.08 | 0.72 | 0.73 | 0.71 | 26499 | 3403 | 23 | 0 | 60 | 0 | 0 | logfile |
✔ | 7K8Z | 22736 | 2023-11-19 | 2020-09-27 | 3.5 | 4.17 | — | 4.0 | 0.007 | 0.86 | 0.0 | 0.05 | 12.54 | 0.00 | 2.103 | 12.77 | 1.06 | 4.5 | 95.4 | 0.1 | -0.73 | 0.78 | 0.78 | 2.11 | 4.0 | 0.003 | 0.66 | 0.0 | 0.05 | 14.10 | 0.00 | 2.182 | 10.22 | 0.30 | 4.0 | 96.0 | 0.0 | 0.02 | 0.58 | 0.77 | 0.77 | 1.56 | 26015 | 3335 | 25 | 0 | 69 | 0 | 0 | logfile |
✔ | 7UKF | 26579 | 2023-11-14 | 2022-04-01 | 3.02 | 3.32 | 3.06 | 3.3 | 0.004 | 0.61 | 0.0 | 0.04 | 11.50 | 0.00 | 2.290 | 9.17 | 0.00 | 2.3 | 97.7 | 0.0 | 1.20 | 0.58 | 0.83 | 3.02 | 3.3 | 0.004 | 0.54 | 0.0 | 0.04 | 14.31 | 0.00 | 2.159 | 9.11 | 0.24 | 3.3 | 96.7 | 0.0 | 1.79 | 0.30 | 0.57 | 0.84 | 2.25 | 8005 | 1036 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 7PMK | 13537 | 2023-11-18 | 2021-09-02 | 3.2 | 3.87 | — | 3.5 | 0.007 | 0.94 | 1.0 | 0.05 | 14.19 | 0.01 | 1.956 | 0.40 | 0.32 | 2.5 | 97.4 | 0.0 | -0.22 | 0.78 | 0.73 | 1.95 | 3.5 | 0.004 | 0.63 | 0.0 | 0.04 | 15.47 | 0.00 | 1.888 | 8.86 | 0.27 | 2.6 | 97.4 | 0.0 | 1.05 | 1.19 | 0.78 | 0.78 | 1.54 | 74697 | 9129 | 29 | 69 | 13 | 0 | 0 | logfile |
✔ | 7UKD | 26577 | 2023-11-14 | 2022-04-01 | 2.88 | 3.39 | 3.14 | 3.3 | 0.004 | 0.62 | 0.0 | 0.04 | 12.08 | 0.00 | 2.195 | 9.18 | 0.00 | 1.9 | 98.1 | 0.0 | 1.30 | 0.58 | 0.83 | 2.72 | 3.3 | 0.004 | 0.60 | 0.0 | 0.04 | 14.98 | 0.00 | 2.137 | 8.31 | 1.54 | 2.8 | 97.2 | 0.0 | 2.07 | 0.91 | 0.55 | 0.84 | 2.54 | 8000 | 1036 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 7TZF | 26208 | 2023-11-15 | 2022-02-15 | 2.4 | 2.00 | 2.20 | 2.3 | 0.010 | 0.53 | 0.0 | 0.04 | 14.56 | 0.00 | 2.252 | 4.74 | 1.43 | 1.0 | 99.0 | 0.0 | -2.36 | 0.54 | 0.77 | 4.70 | 2.0 | 0.003 | 0.60 | 0.0 | 0.04 | 16.83 | 0.00 | 2.219 | 6.21 | 1.43 | 1.8 | 98.2 | 0.0 | 0.83 | 0.83 | 0.57 | 0.83 | 4.87 | 10342 | 1272 | 13 | 0 | 19 | 25 | 0 | logfile |
✔ | 7WK3 | 32557 | 2023-11-19 | 2022-01-08 | 3.4 | 2.86 | — | 3.4 | 0.004 | 0.56 | 0.0 | 0.04 | 7.18 | 0.00 | 1.998 | 3.79 | 0.00 | 3.6 | 96.3 | 0.0 | -2.17 | 0.65 | 0.57 | 1.77 | 3.3 | 0.004 | 0.72 | 0.0 | 0.04 | 14.28 | 0.00 | 2.082 | 10.49 | 0.36 | 3.3 | 96.7 | 0.0 | -0.16 | 1.11 | 0.79 | 0.79 | 1.77 | 24805 | 3162 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SAR | 40277 | 2023-11-17 | 2023-04-01 | 3.82 | 3.32 | 3.81 | 3.2 | 0.006 | 1.11 | 0.0 | 0.06 | 14.50 | 0.01 | 2.247 | 4.44 | 0.00 | 7.4 | 92.2 | 0.4 | -2.28 | 0.62 | 0.73 | 1.75 | 3.2 | 0.003 | 0.70 | 0.0 | 0.05 | 16.46 | 0.00 | 2.122 | 10.32 | 0.23 | 9.3 | 90.4 | 0.2 | -1.81 | 0.45 | 0.62 | 0.74 | 1.36 | 19963 | 2465 | 27 | 0 | 63 | 0 | 0 | logfile |
✔ | 7SN3 | 25210 | 2023-11-19 | 2021-10-27 | 3.1 | 3.31 | — | 3.2 | 0.009 | 1.11 | 4.0 | 0.07 | 13.91 | 0.01 | 1.922 | 5.26 | 0.10 | 0.4 | 99.3 | 0.3 | -0.84 | 0.75 | 0.82 | 3.32 | 3.2 | 0.004 | 0.66 | 0.0 | 0.05 | 14.83 | 0.00 | 2.126 | 8.24 | 0.24 | 4.5 | 95.4 | 0.1 | 0.17 | 0.95 | 0.76 | 0.87 | 2.93 | 27447 | 3451 | 15 | 0 | 54 | 0 | 0 | logfile |
✔ | 7L8Y | 23240 | 2023-11-16 | 2021-01-01 | 4.2 | 4.30 | 4.00 | 4.2 | 0.021 | 1.67 | 1.0 | 0.14 | 10.19 | 0.02 | 2.188 | 2.09 | 0.00 | 2.4 | 97.6 | 0.0 | 1.02 | 0.71 | 0.81 | — | 4.2 | 0.003 | 0.65 | 0.0 | 0.04 | 13.29 | 0.00 | 2.138 | 8.28 | 0.00 | 3.0 | 97.0 | 0.0 | 0.20 | 0.91 | 0.71 | 0.82 | — | 15903 | 1739 | 27 | 0 | 292 | 0 | 0 | logfile |
✔ | 7WK2 | 32556 | 2023-11-19 | 2022-01-08 | 3.1 | 2.76 | — | 3.3 | 0.006 | 0.84 | 0.0 | 0.05 | 8.84 | 0.01 | 1.531 | 3.68 | 0.22 | 3.9 | 95.9 | 0.2 | -3.00 | 0.72 | 0.68 | 1.17 | 3.3 | 0.005 | 0.79 | 0.0 | 0.05 | 14.91 | 0.00 | 2.124 | 12.06 | 0.76 | 4.0 | 96.0 | 0.0 | -0.56 | 1.64 | 0.81 | 0.80 | 2.30 | 24879 | 3171 | 3 | 0 | 0 | 0 | 0 | logfile |