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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8ADG | 15362 | 2023-04-26 | 2022-07-08 | 3.0 | 3.31 | 3.06 | 3.3 | 0.006 | 0.62 | 0.0 | 0.04 | 14.03 | 0.00 | 1.941 | 3.67 | 0.00 | 4.0 | 96.0 | 0.0 | 0.24 | 0.64 | 0.82 | 3.73 | 3.3 | 0.003 | 0.51 | 0.0 | 0.04 | 15.23 | 0.00 | 1.375 | 3.11 | 1.11 | 4.0 | 96.0 | 0.0 | 0.35 | 0.90 | 0.60 | 0.83 | 3.53 | 23183 | 1506 | 6 | 0 | 0 | 0 | 11375 | logfile |
✔ | 7VY3 | 32193 | 2023-04-24 | 2021-11-13 | 2.63 | 2.38 | — | 2.5 | 0.019 | 1.84 | 0.0 | 0.05 | 18.70 | 0.02 | 2.032 | 10.93 | 2.30 | 2.0 | 98.0 | 0.0 | 1.10 | 0.70 | 0.85 | 4.77 | 2.5 | 0.003 | 0.64 | 0.0 | 0.04 | 17.62 | 0.00 | 2.046 | 10.13 | 1.58 | 1.8 | 98.2 | 0.0 | 2.46 | 1.25 | 0.71 | 0.88 | 4.34 | 18831 | 1846 | 49 | 0 | 85 | 0 | 0 | logfile |
✔ | 6G5i | 4353 | 2023-04-28 | 2018-03-29 | 3.5 | 3.78 | — | 3.5 | 0.009 | 1.25 | 1.0 | 0.06 | 16.47 | 0.01 | 1.824 | 8.06 | 0.69 | 10.1 | 89.8 | 0.1 | -4.49 | 0.77 | 0.73 | 1.91 | 3.5 | 0.003 | 0.69 | 0.0 | 0.04 | 17.46 | 0.00 | 2.051 | 16.52 | 0.40 | 6.5 | 93.5 | 0.0 | -1.93 | 1.33 | 0.82 | 0.81 | 1.55 | 77185 | 5246 | 39 | 1657 | 3 | 0 | 0 | logfile |
✔ | 7Ui0 | 26521 | 2023-04-25 | 2022-03-28 | 3.4 | 3.51 | 3.43 | 3.6 | 0.008 | 0.81 | 0.0 | 0.05 | 13.94 | 0.01 | 2.052 | 14.18 | 0.00 | 5.3 | 94.7 | 0.0 | -1.38 | 0.81 | 0.82 | 2.16 | 3.6 | 0.004 | 0.63 | 0.0 | 0.04 | 15.79 | 0.00 | 2.121 | 11.79 | 0.29 | 3.9 | 96.1 | 0.0 | -0.88 | 1.35 | 0.83 | 0.86 | 2.68 | 19203 | 2415 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XSK | 22302 | 2023-04-24 | 2020-07-15 | 3.85 | 4.41 | 3.93 | 4.2 | 0.006 | 1.06 | 0.0 | 0.07 | 12.91 | 0.01 | 2.271 | 4.44 | 0.37 | 2.1 | 97.9 | 0.0 | 0.19 | 0.83 | 0.83 | 1.60 | 4.2 | 0.005 | 0.73 | 0.0 | 0.04 | 14.84 | 0.00 | 2.090 | 13.35 | 0.53 | 3.4 | 96.6 | 0.0 | 0.26 | 1.63 | 0.84 | 0.85 | 1.85 | 17322 | 2163 | 27 | 0 | 36 | 0 | 0 | logfile |
✔ | 7E9G | 31031 | 2023-04-26 | 2021-03-04 | 3.5 | 2.34 | — | 3.1 | 0.004 | 0.59 | 0.0 | 0.10 | 11.66 | 0.00 | 2.196 | 9.69 | 0.00 | 3.8 | 96.2 | 0.0 | -3.17 | 0.70 | 0.67 | 1.96 | 1.9 | 0.004 | 0.66 | 0.0 | 0.04 | 14.64 | 0.00 | 2.144 | 15.22 | 0.49 | 6.0 | 94.0 | 0.0 | -1.46 | 0.67 | 0.72 | 0.71 | 1.96 | 18816 | 2557 | 10 | 0 | 3 | 0 | 0 | logfile |
✔ | 7JG1 | 22309 | 2023-04-23 | 2020-07-18 | 3.3 | 3.64 | 3.36 | 3.8 | 0.004 | 0.76 | 0.0 | 0.06 | 12.74 | 0.01 | 1.169 | 5.04 | 0.33 | 7.6 | 92.4 | 0.0 | -1.03 | 0.55 | 0.62 | 1.29 | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 15.50 | 0.00 | 2.067 | 8.45 | 0.44 | 4.8 | 94.8 | 0.4 | 0.24 | 1.14 | 0.60 | 0.76 | 1.85 | 15811 | 1045 | 8 | 0 | 4 | 0 | 7808 | logfile |
✔ | 7RR7 | 24654 | 2023-04-26 | 2021-08-09 | 3.05 | 3.60 | 3.05 | 3.5 | 0.005 | 0.77 | 2.0 | 0.05 | 14.15 | 0.00 | 2.201 | 8.22 | 0.28 | 3.1 | 96.9 | 0.0 | 0.40 | 0.76 | 0.85 | 2.89 | 3.5 | 0.002 | 0.53 | 0.0 | 0.04 | 14.05 | 0.00 | 2.122 | 8.20 | 0.28 | 2.3 | 97.7 | 0.0 | 0.93 | 0.33 | 0.77 | 0.88 | 2.40 | 23734 | 3061 | 6 | 0 | 27 | 0 | 0 | logfile |
✔ | 7PT6 | 13619 | 2023-04-28 | 2021-09-26 | 3.2 | 3.12 | — | 3.1 | 0.006 | 1.06 | 30.0 | 0.06 | 14.96 | 0.01 | 1.718 | 12.07 | 0.34 | 3.2 | 96.8 | 0.0 | -0.49 | 0.71 | 0.82 | 2.72 | 3.1 | 0.003 | 0.54 | 0.0 | 0.04 | 16.37 | 0.00 | 1.937 | 8.11 | 0.16 | 2.8 | 97.2 | 0.0 | 0.45 | 1.51 | 0.71 | 0.86 | 2.62 | 74358 | 9282 | 34 | 0 | 52 | 0 | 0 | logfile |
✔ | 7UKF | 26579 | 2023-04-20 | 2022-04-01 | 3.02 | 3.32 | 3.06 | 3.3 | 0.004 | 0.61 | 0.0 | 0.04 | 11.50 | 0.00 | 2.290 | 9.17 | 0.00 | 2.3 | 97.7 | 0.0 | 1.20 | 0.58 | 0.83 | 3.02 | 3.3 | 0.004 | 0.54 | 0.0 | 0.04 | 14.31 | 0.00 | 2.159 | 9.11 | 0.24 | 3.3 | 96.7 | 0.0 | 1.79 | 0.30 | 0.57 | 0.84 | 2.25 | 8005 | 1036 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 7WEE | 32448 | 2023-04-20 | 2021-12-23 | 4.0 | 4.09 | — | 4.1 | 0.005 | 0.72 | 0.0 | 0.04 | 12.68 | 0.01 | 2.116 | 8.35 | 0.00 | 4.5 | 95.5 | 0.0 | -1.60 | 0.48 | 0.80 | — | 4.0 | 0.005 | 0.77 | 0.0 | 0.05 | 15.45 | 0.00 | 2.086 | 13.21 | 0.54 | 10.4 | 89.6 | 0.0 | -1.59 | 0.47 | 0.47 | 0.80 | — | 3350 | 429 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q4E | 13804 | 2023-04-21 | 2021-10-30 | 3.63 | 3.95 | 3.60 | 3.8 | 0.008 | 0.99 | 0.0 | 0.06 | 13.94 | 0.01 | 1.857 | 5.12 | 0.00 | 2.5 | 97.5 | 0.0 | -1.91 | 0.70 | 0.77 | 3.06 | 3.8 | 0.004 | 0.61 | 0.0 | 0.03 | 16.07 | 0.00 | 1.922 | 9.65 | 0.00 | 4.0 | 96.0 | 0.0 | 1.17 | 1.50 | 0.69 | 0.78 | 2.09 | 10049 | 608 | 9 | 0 | 29 | 0 | 4731 | logfile |
✔ | 7E26 | 30952 | 2023-04-22 | 2021-02-04 | 2.29 | 2.97 | — | 2.9 | 0.009 | 0.93 | 0.0 | 0.06 | 14.05 | 0.01 | 2.312 | 2.69 | 1.19 | 1.5 | 98.5 | 0.0 | -2.93 | 0.73 | 0.88 | 5.43 | 2.9 | 0.003 | 0.51 | 0.0 | 0.04 | 15.93 | 0.00 | 2.189 | 4.06 | 1.69 | 1.8 | 98.2 | 0.0 | 1.72 | 0.32 | 0.57 | 0.83 | 4.90 | 11360 | 1435 | 10 | 0 | 0 | 80 | 0 | logfile |
✔ | 7WA1 | 32379 | 2023-04-20 | 2021-12-11 | 2.9 | 3.13 | — | 3.1 | 0.003 | 0.58 | 0.0 | 0.04 | 11.30 | 0.01 | 2.103 | 2.47 | 1.59 | 2.8 | 97.2 | 0.0 | -3.55 | 0.68 | 0.82 | 3.80 | 3.1 | 0.003 | 0.53 | 0.0 | 0.04 | 15.28 | 0.00 | 2.187 | 7.40 | 2.31 | 2.9 | 97.1 | 0.0 | 0.48 | 1.45 | 0.66 | 0.83 | 3.37 | 6440 | 790 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7BoJ | 30130 | 2023-04-25 | 2020-03-19 | 2.5 | 2.54 | 2.42 | 2.5 | 0.007 | 0.92 | 0.0 | 0.06 | 12.86 | 0.01 | 2.271 | 3.35 | 0.00 | 2.4 | 97.6 | 0.0 | -2.48 | 0.77 | 0.86 | 4.26 | 2.5 | 0.005 | 0.67 | 0.0 | 0.05 | 15.81 | 0.00 | 2.132 | 7.61 | 2.17 | 2.2 | 97.8 | 0.0 | 1.73 | 1.86 | 0.78 | 0.88 | 4.15 | 121500 | 15900 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SCA | 25031 | 2023-04-20 | 2021-09-27 | 2.1 | 2.23 | 2.15 | 2.2 | 0.011 | 1.14 | 7.0 | 0.07 | 15.33 | 0.01 | 2.057 | 5.44 | 0.78 | 1.0 | 99.0 | 0.0 | 2.17 | 0.79 | 0.85 | 5.74 | 2.2 | 0.002 | 0.55 | 0.0 | 0.04 | 16.60 | 0.00 | 2.121 | 8.28 | 0.87 | 0.9 | 99.1 | 0.0 | 2.87 | 1.09 | 0.79 | 0.85 | 5.28 | 55437 | 6836 | 116 | 0 | 54 | 1325 | 0 | logfile |
✔ | 7XM1 | 33289 | 2023-04-21 | 2022-04-24 | 3.96 | 3.41 | 3.91 | 4.0 | 0.002 | 0.43 | 0.0 | 0.04 | 15.16 | 0.00 | 2.503 | 2.22 | 0.00 | 3.3 | 96.7 | 0.0 | 2.33 | 0.73 | 0.81 | 1.85 | 3.9 | 0.003 | 0.56 | 0.0 | 0.04 | 18.87 | 0.00 | 2.214 | 4.30 | 0.31 | 3.3 | 96.7 | 0.0 | 2.60 | 0.65 | 0.74 | 0.83 | 1.49 | 60240 | 7380 | 101 | 0 | 60 | 0 | 0 | logfile |
✔ | 7T11 | 25587 | 2023-04-20 | 2021-11-30 | 2.7 | 2.94 | — | 3.0 | 0.004 | 0.61 | 0.0 | 0.04 | 10.76 | 0.00 | 2.107 | 3.46 | 0.27 | 2.4 | 97.6 | 0.0 | 0.96 | 0.60 | 0.74 | 3.90 | 3.0 | 0.005 | 0.68 | 0.0 | 0.04 | 13.72 | 0.00 | 2.232 | 3.33 | 0.93 | 3.5 | 96.5 | 0.0 | 0.85 | 0.43 | 0.62 | 0.80 | 3.68 | 8151 | 1132 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7L86 | 23223 | 2023-04-23 | 2020-12-31 | 3.4 | 3.54 | 3.36 | 3.5 | 0.023 | 1.70 | 0.0 | 0.14 | 9.63 | 0.02 | 2.361 | 1.29 | 0.00 | 1.5 | 98.5 | 0.0 | 0.96 | 0.73 | 0.84 | 4.17 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 14.38 | 0.00 | 2.193 | 6.14 | 0.27 | 2.1 | 97.9 | 0.0 | 0.31 | 1.21 | 0.72 | 0.85 | 3.03 | 15802 | 1686 | 47 | 0 | 323 | 0 | 0 | logfile |
✔ | 7X6A | 33019 | 2023-04-29 | 2022-03-07 | 3.5 | 3.86 | — | 3.8 | 0.002 | 0.52 | 0.0 | 0.04 | 14.04 | 0.00 | 1.981 | 7.25 | 0.06 | 6.2 | 93.5 | 0.4 | -1.29 | 0.76 | 0.78 | 1.61 | 3.8 | 0.002 | 0.59 | 0.0 | 0.04 | 15.95 | 0.00 | 2.124 | 6.71 | 0.21 | 6.0 | 93.6 | 0.4 | -0.96 | 1.67 | 0.76 | 0.80 | 1.92 | 30879 | 3969 | 9 | 0 | 0 | 0 | 0 | logfile |