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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8FU6 | 29453 | 2023-12-08 | 2023-01-16 | 2.9 | 3.13 | 2.94 | 3.2 | 0.002 | 0.60 | 0.0 | 0.04 | 12.46 | 0.00 | 2.199 | 3.83 | 0.00 | 2.6 | 97.4 | 0.0 | 0.07 | 0.58 | 0.80 | 3.34 | 3.2 | 0.002 | 0.47 | 0.0 | 0.04 | 15.19 | 0.00 | 2.200 | 4.35 | 1.16 | 1.9 | 98.1 | 0.0 | 1.22 | 0.39 | 0.59 | 0.81 | 2.58 | 8834 | 1112 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YKD | 33891 | 2023-12-08 | 2022-07-22 | 2.81 | 3.29 | 2.94 | 3.2 | 0.009 | 0.86 | 0.0 | 0.06 | 14.19 | 0.00 | 2.118 | 15.46 | 0.10 | 5.0 | 95.0 | 0.0 | -0.18 | 0.70 | 0.83 | 4.27 | 3.2 | 0.003 | 0.66 | 0.0 | 0.04 | 15.06 | 0.00 | 2.084 | 9.83 | 1.56 | 3.3 | 96.6 | 0.1 | 0.57 | 0.93 | 0.63 | 0.81 | 3.11 | 8965 | 1133 | 7 | 0 | 5 | 0 | 0 | logfile |
✔ | 7SoD | 25267 | 2023-12-07 | 2021-10-29 | 3.2 | 3.43 | 3.21 | 3.4 | 0.011 | 1.24 | 0.0 | 0.08 | 9.17 | 0.01 | 2.129 | 0.40 | 0.49 | 2.4 | 97.6 | 0.0 | 1.01 | 0.70 | 0.86 | 5.20 | 3.4 | 0.004 | 0.57 | 0.0 | 0.04 | 12.35 | 0.00 | 2.285 | 4.00 | 0.25 | 3.3 | 96.7 | 0.0 | 1.02 | 1.29 | 0.69 | 0.91 | 5.44 | 3830 | 473 | 5 | 0 | 7 | 0 | 0 | logfile |
✔ | 7XCi | 33121 | 2023-12-10 | 2022-03-24 | 3.2 | 3.43 | 3.23 | 3.5 | 0.009 | 0.75 | 0.0 | 0.04 | 13.67 | 0.01 | 2.000 | 6.88 | 0.14 | 3.3 | 96.4 | 0.3 | 0.57 | 0.68 | 0.81 | 2.87 | 3.4 | 0.004 | 0.58 | 0.0 | 0.04 | 14.83 | 0.00 | 2.086 | 6.34 | 0.57 | 3.9 | 95.9 | 0.1 | 0.90 | 1.02 | 0.68 | 0.84 | 2.76 | 6547 | 791 | 5 | 0 | 9 | 0 | 0 | logfile |
✔ | 7TPK | 26058 | 2023-12-07 | 2022-01-25 | 3.4 | 3.41 | — | 3.4 | 0.011 | 1.40 | 1.0 | 0.08 | 9.83 | 0.01 | 2.528 | 2.12 | 0.00 | 4.7 | 95.3 | 0.0 | -0.98 | 0.60 | 0.72 | 4.39 | 3.4 | 0.004 | 0.61 | 0.0 | 0.04 | 14.41 | 0.00 | 2.320 | 4.24 | 0.00 | 3.6 | 96.4 | 0.0 | -1.50 | 1.24 | 0.65 | 0.81 | 3.33 | 1484 | 194 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7WS7 | 32749 | 2023-12-07 | 2022-01-28 | 3.4 | 3.83 | — | 3.7 | 0.005 | 0.71 | 0.0 | 0.05 | 14.98 | 0.00 | 1.820 | 9.34 | 0.00 | 5.1 | 94.9 | 0.0 | -1.78 | 0.71 | 0.84 | 3.63 | 3.7 | 0.003 | 0.64 | 0.0 | 0.04 | 15.65 | 0.00 | 2.115 | 10.23 | 0.18 | 4.1 | 95.9 | 0.0 | -1.24 | 0.95 | 0.70 | 0.87 | 3.17 | 5209 | 671 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7CG4 | 30350 | 2023-12-09 | 2020-06-30 | 3.6 | 4.04 | — | 3.9 | 0.003 | 0.69 | 0.0 | 0.04 | 14.90 | 0.00 | 2.192 | 7.47 | 0.34 | 5.1 | 94.9 | 0.0 | -2.88 | 0.49 | 0.77 | 0.53 | 4.0 | 0.004 | 0.88 | 0.0 | 0.04 | 17.36 | 0.00 | 2.148 | 10.42 | 0.51 | 5.3 | 94.7 | 0.1 | 1.07 | 1.96 | 0.45 | 0.76 | 0.41 | 10943 | 1419 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RFS | 4874 | 2023-12-09 | 2019-04-16 | 4.04 | 4.52 | — | 4.1 | 0.010 | 1.26 | 0.0 | 0.94 | 10.33 | 0.01 | 2.078 | 8.88 | 0.15 | 8.3 | 91.5 | 0.2 | -4.08 | 0.83 | 0.83 | — | 4.1 | 0.008 | 1.57 | 0.0 | 0.29 | 11.95 | 0.00 | 2.089 | 15.73 | 0.00 | 5.9 | 94.1 | 0.0 | -0.68 | 1.38 | 0.83 | 0.84 | — | 60966 | 7685 | 49 | 0 | 12 | 0 | 0 | logfile |
✔ | 6X62 | 22068 | 2023-12-08 | 2020-05-27 | 3.5 | 3.69 | — | 3.7 | 0.014 | 1.87 | 45.0 | 0.09 | 15.63 | 0.01 | 2.185 | 6.98 | 4.90 | 8.5 | 91.5 | 0.0 | -3.87 | 0.65 | 0.64 | 0.52 | 3.6 | 0.004 | 0.87 | 0.0 | 0.05 | 16.24 | 0.00 | 1.996 | 20.45 | 0.90 | 6.4 | 93.6 | 0.0 | -1.71 | 1.27 | 0.74 | 0.82 | 1.24 | 109070 | 15548 | 117 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XJY | 33237 | 2023-12-09 | 2022-04-19 | 3.6 | 3.59 | 3.48 | 3.7 | 0.007 | 0.94 | 3.0 | 0.06 | 14.44 | 0.01 | 2.197 | 9.77 | 7.59 | 4.2 | 95.5 | 0.3 | -0.02 | 0.64 | 0.71 | 1.97 | 3.6 | 0.003 | 0.62 | 0.0 | 0.04 | 16.21 | 0.00 | 2.182 | 8.07 | 0.30 | 3.4 | 96.5 | 0.1 | 0.87 | 1.37 | 0.66 | 0.75 | 2.11 | 12070 | 1526 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7B5i | 12034 | 2023-12-09 | 2020-12-03 | 2.8 | 2.89 | 2.91 | 2.8 | 0.006 | 0.81 | 0.0 | 0.05 | 13.15 | 0.01 | 2.309 | 4.79 | 0.26 | 3.7 | 96.3 | 0.0 | -1.72 | 0.64 | 0.84 | 3.97 | 2.8 | 0.004 | 0.61 | 0.0 | 0.04 | 15.66 | 0.00 | 2.164 | 3.43 | 1.68 | 3.0 | 97.0 | 0.0 | -0.63 | 4.58 | 0.67 | 0.87 | 3.93 | 64458 | 8100 | 30 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SoC | 25266 | 2023-12-07 | 2021-10-29 | 3.3 | 3.48 | 3.25 | 3.5 | 0.011 | 1.22 | 0.0 | 0.07 | 10.59 | 0.00 | 2.526 | 0.89 | 0.00 | 1.9 | 98.1 | 0.0 | 0.30 | 0.70 | 0.86 | 4.49 | 3.5 | 0.006 | 0.62 | 0.0 | 0.05 | 13.23 | 0.00 | 2.154 | 4.31 | 0.28 | 3.0 | 97.0 | 0.0 | -0.23 | 0.51 | 0.68 | 0.90 | 4.20 | 3448 | 433 | 5 | 0 | 7 | 0 | 0 | logfile |
✔ | 7UKH | 26581 | 2023-12-09 | 2022-04-01 | 2.33 | 2.55 | 2.38 | 2.5 | 0.004 | 0.61 | 0.0 | 0.04 | 17.88 | 0.00 | 2.035 | 7.98 | 1.80 | 2.9 | 97.1 | 0.0 | 0.99 | 0.77 | 0.85 | 3.75 | 2.5 | 0.003 | 0.54 | 0.0 | 0.04 | 18.19 | 0.00 | 2.189 | 7.26 | 1.41 | 2.6 | 97.4 | 0.0 | 1.49 | 0.29 | 0.75 | 0.86 | 3.77 | 12340 | 1536 | 16 | 0 | 16 | 0 | 0 | logfile |
✔ | 8FDU | 29014 | 2023-12-10 | 2022-12-04 | 3.3 | 3.75 | 3.30 | 3.6 | 0.005 | 0.83 | 0.0 | 0.05 | 13.46 | 0.00 | 2.212 | 12.19 | 0.21 | 4.1 | 95.9 | 0.1 | -0.29 | 0.66 | 0.78 | 1.76 | 3.6 | 0.003 | 0.65 | 0.0 | 0.04 | 15.52 | 0.00 | 2.143 | 11.88 | 0.27 | 4.2 | 95.8 | 0.0 | 0.15 | 1.68 | 0.66 | 0.79 | 1.84 | 13193 | 1633 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7MKG | 23890 | 2023-12-09 | 2021-04-23 | 3.07 | 3.13 | — | 4.0 | 0.023 | 1.98 | 0.0 | 0.10 | 10.38 | 0.01 | 2.409 | 0.44 | 0.00 | 5.6 | 94.4 | 0.0 | -1.46 | 0.47 | 0.65 | 2.63 | 4.1 | 0.004 | 0.68 | 0.0 | 0.05 | 13.47 | 0.00 | 2.171 | 19.98 | 0.16 | 6.9 | 93.1 | 0.0 | -2.66 | 1.99 | 0.47 | 0.70 | 2.73 | 11370 | 730 | 10 | 0 | 0 | 0 | 5800 | logfile |
✔ | 7SoF | 25269 | 2023-12-07 | 2021-10-29 | 3.6 | 3.79 | 3.59 | 3.8 | 0.010 | 1.31 | 1.0 | 0.08 | 8.43 | 0.01 | 2.563 | 1.12 | 0.00 | 3.4 | 96.6 | 0.0 | 0.64 | 0.67 | 0.78 | 4.10 | 3.8 | 0.004 | 0.67 | 0.0 | 0.05 | 12.74 | 0.00 | 2.156 | 6.31 | 0.29 | 4.4 | 95.6 | 0.0 | -0.16 | 1.38 | 0.69 | 0.82 | 3.69 | 3735 | 488 | 5 | 0 | 9 | 0 | 0 | logfile |
✔ | 7E81 | 31007 | 2023-12-08 | 2021-02-28 | 4.5 | 6.05 | — | 4.7 | 0.007 | 0.83 | 12.0 | 0.05 | 13.14 | 0.00 | 2.027 | 10.57 | 2.21 | 6.7 | 92.7 | 0.6 | -3.63 | 0.65 | 0.66 | — | 4.6 | 0.004 | 0.75 | 0.0 | 0.04 | 12.93 | 0.00 | 2.061 | 26.17 | 0.03 | 3.2 | 96.8 | 0.0 | -0.56 | 1.88 | 0.71 | 0.84 | — | 57178 | 7397 | 68 | 0 | 154 | 0 | 0 | logfile |
✔ | 8iP4 | 35631 | 2023-12-10 | 2023-03-14 | 2.7 | 3.34 | 2.82 | 3.1 | 0.002 | 0.44 | 0.0 | 0.04 | 12.81 | 0.00 | 2.319 | 4.04 | 0.00 | 1.6 | 98.4 | 0.0 | 3.99 | 0.73 | 0.82 | 2.85 | 3.1 | 0.003 | 0.54 | 0.0 | 0.04 | 15.58 | 0.00 | 2.266 | 7.93 | 0.91 | 1.7 | 98.3 | 0.0 | 3.54 | 1.11 | 0.73 | 0.82 | 3.23 | 12933 | 1600 | 12 | 0 | 3 | 5 | 0 | logfile |
✔ | 7Y36 | 33590 | 2023-12-08 | 2022-06-10 | 2.8 | 3.76 | 2.72 | 3.7 | 0.007 | 0.73 | 0.0 | 0.05 | 12.89 | 0.00 | 2.152 | 7.06 | 0.00 | 4.2 | 95.8 | 0.0 | -1.26 | 0.57 | 0.54 | 0.34 | 3.6 | 0.003 | 0.75 | 0.0 | 0.04 | 16.83 | 0.00 | 0.249 | 10.79 | 3.23 | 3.9 | 96.1 | 0.0 | 0.37 | 1.49 | 0.63 | 0.77 | 2.04 | 9206 | 1151 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 7WAH | 32385 | 2023-12-10 | 2021-12-14 | 2.45 | 2.65 | — | 2.8 | 0.002 | 0.51 | 0.0 | 0.04 | 13.58 | 0.00 | 2.239 | 7.07 | 0.55 | 1.7 | 98.3 | 0.0 | 0.28 | 0.64 | 0.80 | 3.72 | 2.8 | 0.003 | 0.55 | 0.0 | 0.04 | 16.95 | 0.00 | 2.072 | 7.77 | 1.72 | 2.5 | 97.5 | 0.0 | 0.60 | 1.00 | 0.63 | 0.80 | 3.35 | 13217 | 1473 | 3 | 62 | 4 | 0 | 0 | logfile |