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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6o1o | 0454 | 2023-11-16 | 2019-02-21 | 3.8 | 4.00 | — | 3.6 | 0.008 | 1.55 | 0.0 | 0.07 | 15.00 | 0.01 | 2.295 | 4.58 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.72 | 0.70 | — | 3.6 | 0.013 | 1.78 | 0.0 | 0.07 | 13.81 | 0.00 | 1.989 | 32.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.70 | 0.78 | 0.76 | — | 15193 | 0 | 14 | 66 | 2757 | 0 | 0 | logfile |
✔ | 7YGD | 33816 | 2023-11-14 | 2022-07-11 | 3.41 | 4.13 | 3.42 | 3.3 | 0.002 | 0.49 | 0.0 | 0.03 | 15.33 | 0.00 | 2.100 | 14.25 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.81 | — | 3.3 | 0.007 | 0.75 | 0.0 | 0.04 | 17.32 | 0.01 | 1.825 | 32.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.50 | 0.91 | 0.88 | — | 8313 | 0 | 3 | 389 | 6 | 0 | 0 | logfile |
✔ | 7XD3 | 33134 | 2023-11-14 | 2022-03-26 | 4.05 | 4.16 | — | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 16.04 | 0.00 | 1.960 | 1.21 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.85 | 0.74 | — | 3.9 | 0.007 | 0.80 | 0.0 | 0.04 | 17.33 | 0.01 | 1.680 | 17.06 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.79 | 0.87 | 0.82 | — | 9062 | 0 | 1 | 423 | 28 | 0 | 0 | logfile |
✔ | 7YGC | 33815 | 2023-11-14 | 2022-07-11 | 2.65 | 3.28 | 2.77 | 2.9 | 0.007 | 0.50 | 0.0 | 0.03 | 14.78 | 0.00 | 1.778 | 12.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.83 | — | 2.9 | 0.004 | 0.55 | 0.0 | 0.03 | 15.37 | 0.00 | 1.949 | 13.78 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.47 | 0.92 | 0.91 | — | 8690 | 0 | 3 | 407 | 6 | 0 | 0 | logfile |
✔ | 7YG8 | 33811 | 2023-11-14 | 2022-07-11 | 2.97 | 3.59 | 3.04 | 3.0 | 0.002 | 0.48 | 0.0 | 0.03 | 14.91 | 0.00 | 2.042 | 13.48 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.89 | 0.82 | — | 3.0 | 0.006 | 0.65 | 0.0 | 0.04 | 16.08 | 0.00 | 1.846 | 19.87 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.38 | 0.91 | 0.89 | — | 8440 | 0 | 3 | 395 | 5 | 0 | 0 | logfile |
✔ | 7ZFW | 14704 | 2023-11-15 | 2022-04-01 | 3.8 | 4.62 | 3.46 | 3.0 | 0.006 | 0.83 | 0.0 | 0.05 | 17.97 | 0.03 | 2.266 | 2.77 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.32 | 0.81 | — | 3.0 | 0.008 | 0.86 | 0.0 | 0.04 | 20.23 | 0.01 | 1.951 | 37.51 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.54 | 0.33 | 0.85 | — | 13188 | 0 | 1 | 615 | 0 | 0 | 0 | logfile |
✔ | 7YGA | 33813 | 2023-11-14 | 2022-07-11 | 2.35 | 3.08 | 2.44 | 2.8 | 0.008 | 0.62 | 0.0 | 0.04 | 15.27 | 0.01 | 1.779 | 10.87 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.89 | 0.87 | — | 2.8 | 0.007 | 0.60 | 0.0 | 0.04 | 15.40 | 0.00 | 1.828 | 12.41 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.16 | 0.89 | 0.88 | — | 8692 | 0 | 3 | 407 | 8 | 0 | 0 | logfile |
✔ | 7YCG | 33738 | 2023-11-14 | 2022-07-01 | 3.18 | 4.71 | 3.37 | 3.5 | 0.002 | 0.50 | 0.0 | 0.03 | 14.85 | 0.00 | 1.893 | 15.83 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.94 | 0.84 | — | 3.5 | 0.007 | 0.67 | 0.0 | 0.04 | 15.91 | 0.00 | 1.847 | 33.58 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.32 | 0.95 | 0.90 | — | 8661 | 0 | 2 | 404 | 4 | 0 | 0 | logfile |
✔ | 7YGB | 33814 | 2023-11-14 | 2022-07-11 | 2.62 | 3.15 | 2.70 | 2.9 | 0.007 | 0.52 | 0.0 | 0.03 | 14.47 | 0.00 | 2.079 | 13.50 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.84 | — | 2.9 | 0.007 | 0.64 | 0.0 | 0.04 | 15.02 | 0.00 | 1.838 | 13.89 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.90 | 0.91 | — | 8738 | 0 | 5 | 407 | 54 | 0 | 0 | logfile |
✔ | 7XD5 | 33136 | 2023-11-14 | 2022-03-26 | 2.84 | 3.32 | 2.81 | 3.1 | 0.003 | 0.58 | 0.0 | 0.03 | 13.91 | 0.00 | 1.864 | 0.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.86 | — | 3.1 | 0.004 | 0.64 | 0.0 | 0.04 | 15.34 | 0.00 | 1.950 | 6.11 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.39 | 0.89 | 0.90 | — | 8714 | 0 | 3 | 406 | 30 | 0 | 0 | logfile |
✔ | 4UQ8 | 2676 | 2023-11-20 | 2014-06-21 | 4.95 | 5.05 | 4.64 | 4.9 | 0.012 | 2.07 | 23.0 | 1.38 | 6.71 | 0.01 | 1.032 | 64.12 | 25.00 | 0.0 | 0.0 | 0.0 | — | 0.57 | 0.75 | — | 4.9 | 0.013 | 2.54 | 0.0 | 0.41 | 5.47 | 0.00 | 2.110 | 23.19 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.11 | 0.61 | 0.83 | — | 28647 | 33 | 54 | 0 | 5686 | 0 | 0 | logfile |
✔ | 7EZ2 | 31386 | 2023-11-14 | 2021-06-01 | 3.05 | 2.80 | — | 3.0 | 0.005 | 0.56 | 0.0 | 0.03 | 13.94 | 0.00 | 1.809 | 0.92 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.69 | 0.81 | — | 3.0 | 0.007 | 0.85 | 0.0 | 0.05 | 15.80 | 0.01 | 1.484 | 7.35 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.04 | 0.73 | 0.89 | — | 8698 | 0 | 3 | 406 | 31 | 0 | 0 | logfile |
✔ | 7PTL | 13630 | 2023-11-18 | 2021-09-27 | 4.9 | 10.06 | 4.95 | — | 0.005 | 1.01 | 0.0 | 0.06 | 16.11 | 0.01 | 2.401 | 0.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.79 | — | — | 0.007 | 0.89 | 0.0 | 0.04 | 21.14 | 0.01 | 1.735 | 83.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.49 | 0.92 | 0.92 | — | 23080 | 0 | 1 | 720 | 0 | 0 | 7743 | logfile |
✔ | 7XD6 | 33137 | 2023-11-14 | 2022-03-26 | 2.84 | 3.25 | 2.83 | 3.0 | 0.005 | 0.74 | 0.0 | 0.04 | 15.28 | 0.00 | 1.975 | 1.30 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.86 | — | 3.0 | 0.005 | 0.67 | 0.0 | 0.04 | 16.16 | 0.00 | 1.876 | 7.55 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.32 | 0.88 | 0.89 | — | 9843 | 0 | 3 | 459 | 29 | 0 | 0 | logfile |
✔ | 7XD7 | 33138 | 2023-11-14 | 2022-03-26 | 3.02 | 3.40 | — | 3.1 | 0.003 | 0.61 | 0.0 | 0.04 | 14.03 | 0.00 | 1.736 | 0.77 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.86 | — | 3.1 | 0.007 | 0.67 | 0.0 | 0.04 | 15.11 | 0.00 | 1.866 | 7.88 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.19 | 0.92 | 0.92 | — | 8693 | 0 | 1 | 405 | 30 | 0 | 0 | logfile |
✔ | 7UVT | 26816 | 2023-11-15 | 2022-05-02 | 3.9 | 4.17 | 4.00 | 4.1 | 0.001 | 0.41 | 0.0 | 0.02 | 16.13 | 0.00 | 1.897 | 6.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.76 | 0.74 | — | 4.1 | 0.006 | 0.72 | 0.0 | 0.04 | 18.00 | 0.01 | 1.911 | 21.68 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.46 | 0.77 | 0.77 | — | 12409 | 0 | 1 | 386 | 0 | 0 | 4149 | logfile |
✔ | 8HD7 | 34671 | 2023-11-14 | 2022-11-03 | 3.52 | 3.99 | 3.58 | 3.3 | 0.003 | 0.60 | 0.0 | 0.03 | 14.67 | 0.00 | 1.927 | 2.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.89 | 0.77 | — | 3.3 | 0.008 | 0.83 | 0.0 | 0.05 | 16.67 | 0.01 | 1.800 | 17.97 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.13 | 0.90 | 0.82 | — | 8983 | 0 | 1 | 419 | 28 | 0 | 0 | logfile |
✔ | 7XD4 | 33135 | 2023-11-14 | 2022-03-26 | 3.89 | 4.13 | — | 3.8 | 0.003 | 0.59 | 0.0 | 0.03 | 15.73 | 0.00 | 1.880 | 1.73 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.85 | 0.73 | — | 3.8 | 0.007 | 0.78 | 0.0 | 0.04 | 17.52 | 0.01 | 1.755 | 18.36 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.84 | 0.87 | 0.78 | — | 9062 | 0 | 1 | 423 | 28 | 0 | 0 | logfile |
✔ | 7URM | 26714 | 2023-11-13 | 2022-04-22 | 3.0 | 3.11 | 3.56 | 2.9 | 0.009 | 1.41 | 0.0 | 0.11 | 23.67 | 0.01 | 2.440 | 0.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.14 | 0.53 | — | 3.0 | 0.007 | 1.16 | 0.0 | 0.05 | 22.80 | 0.01 | 1.988 | 29.25 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.68 | 0.15 | 0.54 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7URi | 26713 | 2023-11-13 | 2022-04-22 | 2.6 | 2.67 | 2.95 | 2.6 | 0.009 | 1.37 | 0.0 | 0.12 | 25.77 | 0.01 | 2.201 | 7.31 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.34 | — | 2.6 | 0.008 | 1.44 | 0.0 | 0.07 | 24.06 | 0.01 | 2.073 | 23.33 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.06 | 0.08 | 0.38 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |