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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7SQV | 25396 | 2023-02-17 | 2021-11-06 | 2.3 | 2.95 | 2.29 | 2.8 | 0.001 | 0.38 | 0.0 | 0.04 | 16.08 | 0.00 | 2.314 | 1.47 | 0.63 | 0.7 | 99.3 | 0.0 | 1.86 | 0.76 | 0.88 | 3.59 | 2.8 | 0.003 | 0.47 | 0.0 | 0.04 | 16.30 | 0.00 | 2.295 | 1.36 | 1.67 | 1.1 | 98.9 | 0.0 | 1.71 | 1.99 | 0.77 | 0.90 | 3.84 | 4471 | 573 | 5 | 0 | 0 | 7 | 0 | logfile |
✔ | 7M30 | 23640 | 2023-02-19 | 2021-03-17 | 3.81 | 2.76 | 3.80 | 2.1 | 0.005 | 1.15 | 0.0 | 0.07 | 13.59 | 0.01 | 1.711 | 9.02 | 0.89 | 5.3 | 94.7 | 0.0 | -0.94 | 0.68 | 0.56 | 1.80 | 2.2 | 0.004 | 1.02 | 0.0 | 0.05 | 17.24 | 0.01 | 2.036 | 26.35 | 1.09 | 6.3 | 93.7 | 0.0 | -0.68 | 3.36 | 0.75 | 0.72 | 1.14 | 9191 | 1167 | 12 | 0 | 2 | 0 | 0 | logfile |
✔ | 7UY7 | 26866 | 2023-02-21 | 2022-05-06 | 4.2 | 4.18 | 4.04 | 3.2 | 0.002 | 0.56 | 1.0 | 0.04 | 15.12 | 0.00 | 2.203 | 13.96 | 0.18 | 3.8 | 96.2 | 0.0 | -0.53 | 0.73 | 0.74 | — | 3.1 | 0.003 | 0.60 | 0.0 | 0.04 | 15.60 | 0.00 | 2.193 | 13.43 | 0.00 | 5.1 | 94.9 | 0.0 | -0.61 | 1.23 | 0.73 | 0.76 | — | 15161 | 1808 | 7 | 10 | 1 | 0 | 0 | logfile |
✔ | 7VAU | 31864 | 2023-02-27 | 2021-08-30 | 3.3 | 2.83 | 3.35 | 3.2 | 0.007 | 0.69 | 0.0 | 0.05 | 13.63 | 0.00 | 1.966 | 5.17 | 0.00 | 2.6 | 97.4 | 0.0 | 0.84 | 0.60 | 0.81 | 2.86 | 3.1 | 0.004 | 0.59 | 0.0 | 0.04 | 16.36 | 0.00 | 1.965 | 6.66 | 0.52 | 2.8 | 97.2 | 0.0 | 0.21 | 1.12 | 0.63 | 0.85 | 2.44 | 29513 | 3787 | 14 | 0 | 4 | 0 | 0 | logfile |
✔ | 7B6D | 12052 | 2023-02-19 | 2020-12-07 | 4.27 | 2.60 | — | 2.5 | 0.005 | 0.87 | 0.0 | 0.05 | 14.40 | 0.01 | 2.049 | 32.99 | 0.43 | 10.2 | 89.7 | 0.1 | -2.46 | 0.78 | 0.74 | — | 2.5 | 0.003 | 0.72 | 0.0 | 0.05 | 14.41 | 0.00 | 2.080 | 23.40 | 0.00 | 9.1 | 90.9 | 0.0 | -1.38 | 1.33 | 0.78 | 0.75 | — | 10470 | 1290 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FiS | 29209 | 2023-02-23 | 2022-12-16 | 3.18 | 3.36 | 3.47 | 3.5 | 0.004 | 0.62 | 1.0 | 0.05 | 14.61 | 0.00 | 2.110 | 3.15 | 0.25 | 5.5 | 94.5 | 0.0 | -0.93 | 0.80 | 0.80 | 2.46 | 3.5 | 0.003 | 0.58 | 0.0 | 0.04 | 15.32 | 0.00 | 2.064 | 6.83 | 0.20 | 5.3 | 94.6 | 0.0 | -0.27 | 0.61 | 0.80 | 0.84 | 2.16 | 20356 | 2357 | 57 | 0 | 142 | 0 | 0 | logfile |
✔ | 7V24 | 31636 | 2023-02-17 | 2021-08-07 | 3.29 | 3.50 | — | 3.4 | 0.006 | 0.80 | 0.0 | 0.05 | 13.64 | 0.00 | 2.164 | 11.90 | 0.24 | 11.3 | 88.7 | 0.0 | -1.86 | 0.67 | 0.83 | 3.60 | 3.4 | 0.005 | 0.69 | 0.0 | 0.04 | 15.40 | 0.00 | 2.137 | 10.96 | 0.00 | 10.4 | 89.6 | 0.0 | -1.14 | 0.40 | 0.66 | 0.84 | 3.54 | 3814 | 487 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Q9D | 4480 | 2023-02-26 | 2018-12-18 | 3.8 | 3.99 | — | 3.9 | 0.007 | 1.15 | 0.0 | 1.60 | 10.39 | 0.01 | 2.107 | 6.41 | 0.24 | 10.8 | 89.0 | 0.2 | -4.23 | 0.74 | 0.82 | 2.23 | 3.9 | 0.012 | 2.41 | 0.0 | 0.48 | 15.95 | 0.00 | 2.100 | 13.81 | 0.27 | 9.4 | 90.6 | 0.0 | -1.43 | 2.17 | 0.74 | 0.83 | 1.66 | 27662 | 3463 | 26 | 0 | 12 | 0 | 0 | logfile |
✔ | 7VAY | 31871 | 2023-02-27 | 2021-08-30 | 3.3 | 2.93 | 3.28 | 3.2 | 0.005 | 0.59 | 0.0 | 0.04 | 13.52 | 0.00 | 1.949 | 6.21 | 0.00 | 2.6 | 97.4 | 0.0 | 1.07 | 0.63 | 0.77 | 3.23 | 3.1 | 0.006 | 0.65 | 0.0 | 0.05 | 16.18 | 0.01 | 1.933 | 8.94 | 0.32 | 2.9 | 97.1 | 0.0 | 0.22 | 1.06 | 0.72 | 0.86 | 3.30 | 29553 | 3788 | 16 | 0 | 5 | 0 | 0 | logfile |
✔ | 7ZF2 | 14696 | 2023-02-24 | 2022-03-31 | 3.86 | 3.97 | 3.73 | 3.9 | 0.007 | 0.62 | 0.0 | 0.04 | 13.32 | 0.00 | 2.162 | 10.43 | 5.77 | 5.7 | 94.3 | 0.0 | 0.01 | 0.78 | 0.86 | 1.96 | 3.9 | 0.003 | 0.62 | 0.0 | 0.04 | 15.06 | 0.00 | 2.212 | 9.61 | 0.43 | 3.7 | 96.3 | 0.0 | 0.47 | 0.39 | 0.78 | 0.85 | 1.40 | 23822 | 3068 | 7 | 0 | 3 | 0 | 0 | logfile |
✔ | 7CWM | 30483 | 2023-02-27 | 2020-08-29 | 3.6 | 4.19 | — | 3.6 | 0.008 | 1.04 | 2.0 | 0.07 | 9.90 | 0.01 | 1.512 | 22.14 | 0.54 | 7.7 | 92.3 | 0.1 | -3.56 | 0.73 | 0.65 | 1.87 | 3.6 | 0.003 | 0.63 | 0.0 | 0.04 | 12.51 | 0.00 | 2.218 | 11.92 | 0.09 | 5.1 | 94.9 | 0.0 | -1.05 | 0.78 | 0.83 | 0.79 | 1.63 | 30772 | 3883 | 26 | 0 | 44 | 0 | 0 | logfile |
✔ | 6VRL | 21370 | 2023-02-17 | 2020-02-07 | 3.8 | 3.98 | 4.22 | 3.9 | 0.002 | 0.56 | 0.0 | 0.04 | 14.02 | 0.00 | 2.159 | 10.57 | 0.00 | 4.9 | 95.1 | 0.0 | -3.12 | 0.49 | 0.69 | 1.43 | 3.9 | 0.003 | 0.71 | 0.0 | 0.04 | 16.18 | 0.00 | 2.038 | 17.54 | 0.46 | 6.6 | 93.4 | 0.0 | -1.10 | 0.78 | 0.50 | 0.70 | 1.42 | 6141 | 764 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7T3o | 25666 | 2023-02-17 | 2021-12-08 | 3.3 | 3.72 | — | 3.7 | 0.006 | 0.68 | 0.0 | 0.05 | 13.49 | 0.00 | 2.284 | 3.91 | 0.29 | 7.1 | 92.9 | 0.0 | -3.36 | 0.49 | 0.86 | 1.84 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 16.17 | 0.00 | 2.229 | 6.17 | 0.00 | 3.6 | 96.4 | 0.0 | 0.21 | 0.58 | 0.48 | 0.84 | 1.64 | 3410 | 452 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MiS | 23863 | 2023-02-25 | 2021-04-17 | 2.8 | 2.48 | — | 2.8 | 0.003 | 0.50 | 0.0 | 0.04 | 14.51 | 0.00 | 1.917 | 3.78 | 0.00 | 3.8 | 96.2 | 0.0 | 0.91 | 0.69 | 0.80 | 3.35 | 2.8 | 0.003 | 0.49 | 0.0 | 0.04 | 16.11 | 0.00 | 1.856 | 4.05 | 0.63 | 3.8 | 96.2 | 0.0 | 1.04 | 0.35 | 0.70 | 0.82 | 3.05 | 25893 | 1616 | 6 | 0 | 6 | 0 | 12854 | logfile |
✔ | 7Li8 | 23363 | 2023-02-17 | 2021-01-26 | 3.9 | 4.37 | — | 4.3 | 0.002 | 0.60 | 0.0 | 0.04 | 10.77 | 0.00 | 2.230 | 6.84 | 0.00 | 5.3 | 94.7 | 0.0 | -3.23 | 0.62 | 0.72 | 1.26 | 4.3 | 0.003 | 0.71 | 0.0 | 0.04 | 14.24 | 0.00 | 2.202 | 10.39 | 0.16 | 7.1 | 92.9 | 0.0 | -1.27 | 2.18 | 0.64 | 0.76 | 1.67 | 6181 | 767 | 5 | 0 | 14 | 0 | 0 | logfile |
✔ | 7N65 | 24195 | 2023-02-23 | 2021-06-07 | 4.15 | 4.35 | — | 4.2 | 0.011 | 1.18 | 0.0 | 0.06 | 14.11 | 0.01 | 1.935 | 35.99 | 4.29 | 15.2 | 84.6 | 0.2 | -4.44 | 0.78 | 0.77 | — | 4.2 | 0.005 | 0.85 | 0.0 | 0.05 | 12.89 | 0.00 | 2.103 | 22.87 | 0.05 | 12.1 | 87.9 | 0.0 | -3.06 | 0.72 | 0.77 | 0.76 | — | 21525 | 2454 | 72 | 0 | 189 | 0 | 0 | logfile |
✔ | 7QUQ | 14151 | 2023-02-23 | 2022-01-18 | 2.6 | 2.44 | — | 2.8 | 0.009 | 0.94 | 0.0 | 0.05 | 12.93 | 0.01 | 2.144 | 15.78 | 0.10 | 4.7 | 95.3 | 0.0 | -1.38 | 0.64 | 0.65 | 1.63 | 2.8 | 0.003 | 0.71 | 0.0 | 0.05 | 16.43 | 0.00 | 2.097 | 20.72 | 2.08 | 4.9 | 95.1 | 0.0 | -0.87 | 1.61 | 0.67 | 0.70 | 1.59 | 19095 | 2457 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 6R4o | 4721 | 2023-02-19 | 2019-03-22 | 4.2 | 4.81 | — | 4.6 | 0.006 | 1.21 | 0.0 | 0.06 | 12.61 | 0.01 | 1.774 | 10.02 | 0.48 | 8.2 | 91.8 | 0.0 | -4.45 | 0.64 | 0.71 | — | 4.6 | 0.003 | 0.72 | 0.0 | 0.04 | 13.28 | 0.00 | 2.001 | 14.04 | 0.10 | 5.8 | 94.2 | 0.0 | 0.01 | 1.02 | 0.64 | 0.72 | — | 9602 | 1182 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 7VAX | 31869 | 2023-02-27 | 2021-08-30 | 2.9 | 2.65 | 2.96 | 2.8 | 0.003 | 0.51 | 0.0 | 0.04 | 13.46 | 0.00 | 2.017 | 4.97 | 0.03 | 2.0 | 98.0 | 0.0 | 1.44 | 0.60 | 0.81 | 3.35 | 2.7 | 0.003 | 0.58 | 0.0 | 0.04 | 16.92 | 0.00 | 1.970 | 8.02 | 2.17 | 2.1 | 97.9 | 0.0 | 0.57 | 0.55 | 0.67 | 0.86 | 3.10 | 29553 | 3788 | 15 | 0 | 5 | 0 | 0 | logfile |
✔ | 7TRJ | 26098 | 2023-02-25 | 2022-01-29 | 2.8 | 3.41 | — | 3.3 | 0.003 | 0.84 | 0.0 | 0.05 | 16.16 | 0.00 | 2.080 | 9.67 | 6.92 | 3.6 | 96.3 | 0.1 | -1.80 | 0.78 | 0.82 | 2.52 | 3.3 | 0.004 | 0.64 | 0.0 | 0.04 | 16.60 | 0.00 | 2.120 | 7.40 | 3.64 | 4.1 | 95.9 | 0.0 | 1.01 | 0.70 | 0.79 | 0.85 | 2.99 | 25190 | 3234 | 10 | 0 | 0 | 0 | 0 | logfile |