The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6XHJ | 22187 | 2023-09-30 | 2020-06-18 | 3.62 | 4.10 | — | 4.0 | 0.014 | 1.38 | 18.0 | 0.08 | 13.47 | 0.01 | 2.225 | 3.12 | 0.00 | 3.5 | 96.5 | 0.0 | -2.59 | 0.61 | 0.53 | 0.86 | 4.0 | 0.002 | 0.63 | 0.0 | 0.04 | 15.79 | 0.00 | 2.079 | 4.93 | 0.20 | 1.4 | 98.6 | 0.0 | 0.51 | 2.45 | 0.75 | 0.75 | 1.05 | 60624 | 8514 | 18 | 0 | 36 | 0 | 0 | logfile |
✔ | 8D8R | 27255 | 2023-09-27 | 2022-06-08 | 4.1 | 4.18 | 1.95 | 4.1 | 0.011 | 1.25 | 0.0 | 0.06 | 11.00 | 0.01 | 2.512 | 1.08 | 0.00 | 2.1 | 97.9 | 0.0 | 1.96 | 0.59 | 0.61 | — | 4.1 | 0.003 | 0.75 | 0.0 | 0.05 | 12.45 | 0.01 | 2.191 | 14.44 | 0.00 | 6.7 | 93.3 | 0.0 | -0.58 | 1.90 | 0.62 | 0.66 | — | 3323 | 425 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8BDZ | 15995 | 2023-09-27 | 2022-10-20 | 3.13 | 3.37 | 1.52 | 3.1 | 0.002 | 0.52 | 0.0 | 0.04 | 12.41 | 0.00 | 2.264 | 6.23 | 0.00 | 3.0 | 97.0 | 0.0 | 2.26 | 0.48 | 0.84 | 2.77 | 3.1 | 0.004 | 0.58 | 0.0 | 0.04 | 14.08 | 0.00 | 2.208 | 9.58 | 0.27 | 1.7 | 98.3 | 0.0 | 3.07 | 0.44 | 0.49 | 0.86 | 2.82 | 3309 | 414 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M8J | 23717 | 2023-09-28 | 2021-03-29 | 3.48 | 3.83 | 3.41 | 3.7 | 0.006 | 0.96 | 0.0 | 0.05 | 14.72 | 0.00 | 1.837 | 12.31 | 0.00 | 6.8 | 93.2 | 0.0 | -0.32 | 0.69 | 0.80 | 2.61 | 3.7 | 0.004 | 0.64 | 0.0 | 0.04 | 15.29 | 0.00 | 2.090 | 7.53 | 0.52 | 7.4 | 92.6 | 0.0 | -0.57 | 0.47 | 0.69 | 0.81 | 2.81 | 6915 | 453 | 3 | 0 | 0 | 0 | 3398 | logfile |
✔ | 7PY4 | 13711 | 2023-09-30 | 2021-10-08 | 3.1 | 3.52 | 3.18 | 3.5 | 0.004 | 0.59 | 0.0 | 0.05 | 12.30 | 0.00 | 1.650 | 4.90 | 0.08 | 3.1 | 96.9 | 0.0 | 0.83 | 0.65 | 0.82 | 3.46 | 3.5 | 0.003 | 0.53 | 0.0 | 0.04 | 14.56 | 0.00 | 2.028 | 5.45 | 0.00 | 3.2 | 96.8 | 0.0 | 0.96 | 0.74 | 0.67 | 0.85 | 2.34 | 11835 | 1439 | 5 | 0 | 11 | 0 | 0 | logfile |
✔ | 8A1R | 15084 | 2023-09-29 | 2022-06-01 | 3.6 | 5.63 | 3.62 | 3.4 | 0.014 | 1.35 | 0.0 | 0.05 | 15.14 | 0.00 | 2.097 | 11.72 | 0.00 | 5.2 | 94.8 | 0.0 | -0.06 | 0.91 | 0.75 | -0.28 | 3.5 | 0.003 | 0.77 | 1.0 | 0.05 | 16.10 | 0.00 | 2.170 | 19.32 | 0.41 | 5.9 | 94.1 | 0.0 | -0.55 | 0.61 | 0.95 | 0.86 | -0.05 | 9286 | 1186 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7ZKi | 14763 | 2023-09-28 | 2022-04-13 | 3.6 | 3.32 | 3.71 | 3.1 | 0.011 | 0.83 | 0.0 | 0.05 | 13.82 | 0.04 | 1.408 | 9.61 | 0.17 | 2.2 | 97.8 | 0.0 | -0.08 | 0.57 | 0.73 | 1.30 | 3.2 | 0.002 | 0.90 | 0.0 | 0.04 | 15.37 | 0.01 | 1.992 | 8.66 | 0.00 | 3.4 | 96.6 | 0.0 | -0.17 | 0.43 | 0.57 | 0.74 | 1.24 | 7120 | 688 | 5 | 77 | 2 | 0 | 0 | logfile |
✔ | 7BJ2 | 12193 | 2023-09-29 | 2021-01-13 | 3.0 | 3.64 | 3.01 | 3.2 | 0.003 | 0.62 | 0.0 | 0.04 | 14.87 | 0.00 | 2.246 | 12.91 | 0.00 | 4.0 | 96.0 | 0.0 | 0.20 | 0.72 | 0.80 | 2.36 | 3.2 | 0.007 | 0.70 | 0.0 | 0.04 | 16.76 | 0.00 | 2.230 | 13.68 | 1.03 | 5.9 | 94.1 | 0.0 | -0.07 | 0.53 | 0.74 | 0.91 | 2.91 | 58552 | 7956 | 26 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YQ4 | 34019 | 2023-09-30 | 2022-08-05 | 3.95 | 4.36 | 4.08 | 4.3 | 0.016 | 1.30 | 0.0 | 0.07 | 17.82 | 0.02 | 2.256 | 4.50 | 0.53 | 9.0 | 91.0 | 0.0 | -4.40 | 0.72 | 0.74 | 1.65 | 4.3 | 0.004 | 0.95 | 0.0 | 0.05 | 18.94 | 0.01 | 2.113 | 10.94 | 0.79 | 9.1 | 90.9 | 0.0 | -2.93 | 1.12 | 0.74 | 0.80 | 1.46 | 10618 | 1243 | 5 | 24 | 0 | 0 | 0 | logfile |
✔ | 7ZDT | 14669 | 2023-09-29 | 2022-03-29 | 2.71 | 2.89 | 2.68 | 2.9 | 0.005 | 0.66 | 0.0 | 0.04 | 13.49 | 0.00 | 1.945 | 6.38 | 0.00 | 1.3 | 98.7 | 0.0 | -0.81 | 0.76 | 0.90 | 3.85 | 2.9 | 0.004 | 0.55 | 0.0 | 0.04 | 15.76 | 0.00 | 1.944 | 5.22 | 1.28 | 1.7 | 98.3 | 0.0 | 2.14 | 0.34 | 0.74 | 0.91 | 3.63 | 9003 | 1155 | 3 | 0 | 2 | 0 | 0 | logfile |
✔ | 7NPW | 12524 | 2023-09-30 | 2021-02-28 | 3.99 | 4.53 | — | 4.3 | 0.003 | 0.67 | 0.0 | 0.04 | 13.77 | 0.00 | 2.290 | 12.91 | 0.00 | 3.3 | 96.7 | 0.0 | 0.92 | 0.52 | 0.76 | 1.58 | 4.3 | 0.003 | 0.78 | 0.0 | 0.05 | 16.19 | 0.00 | 2.160 | 16.52 | 0.66 | 4.0 | 96.0 | 0.0 | 0.75 | 0.62 | 0.56 | 0.81 | 1.26 | 9723 | 1278 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8D48 | 27177 | 2023-09-28 | 2022-06-01 | 3.7 | 3.91 | 3.59 | 3.9 | 0.005 | 0.81 | 1.0 | 0.05 | 15.51 | 0.01 | 1.565 | 11.86 | 0.00 | 7.2 | 92.8 | 0.0 | -1.11 | 0.72 | 0.79 | 2.07 | 3.9 | 0.003 | 0.69 | 0.0 | 0.05 | 15.92 | 0.00 | 2.223 | 8.73 | 0.16 | 5.9 | 94.1 | 0.0 | -0.65 | 0.98 | 0.72 | 0.80 | 1.97 | 5545 | 714 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7oZN | 13129 | 2023-09-28 | 2021-06-28 | 3.5 | 3.79 | 3.49 | 3.7 | 0.002 | 0.42 | 0.0 | 0.04 | 14.10 | 0.00 | 2.073 | 4.61 | 0.00 | 2.0 | 98.0 | 0.0 | 1.13 | 0.77 | 0.72 | 1.17 | 3.7 | 0.004 | 0.69 | 0.0 | 0.05 | 16.69 | 0.00 | 2.069 | 15.15 | 0.51 | 3.5 | 96.5 | 0.0 | -0.01 | 0.84 | 0.80 | 0.78 | 1.48 | 54330 | 6774 | 32 | 0 | 10 | 0 | 0 | logfile |
✔ | 7MTR | 23995 | 2023-09-30 | 2021-05-13 | 3.3 | 2.40 | — | 2.1 | 0.006 | 0.93 | 1.0 | 0.05 | 13.82 | 0.01 | 2.236 | 7.85 | 1.25 | 4.1 | 95.9 | 0.0 | -0.18 | 0.78 | 0.75 | 2.62 | 2.1 | 0.004 | 0.63 | 0.0 | 0.04 | 14.93 | 0.01 | 2.122 | 4.80 | 0.21 | 3.5 | 96.5 | 0.0 | 0.08 | 0.52 | 0.80 | 0.80 | 2.26 | 10933 | 1526 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 7ZDK | 14652 | 2023-09-29 | 2022-03-29 | 3.01 | 3.14 | 2.96 | 3.1 | 0.007 | 0.78 | 0.0 | 0.05 | 14.26 | 0.00 | 2.219 | 7.96 | 0.00 | 1.6 | 98.4 | 0.0 | -1.50 | 0.76 | 0.89 | 3.46 | 3.1 | 0.002 | 0.51 | 0.0 | 0.04 | 15.53 | 0.00 | 1.980 | 6.33 | 0.11 | 1.9 | 98.1 | 0.0 | 1.56 | 0.33 | 0.72 | 0.90 | 2.61 | 9089 | 1161 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8EiQ | 28161 | 2023-09-29 | 2022-09-15 | 3.0 | 2.87 | 3.05 | 3.2 | 0.006 | 1.11 | 0.0 | 0.05 | 12.35 | 0.01 | 1.936 | 1.35 | 1.78 | 1.3 | 98.7 | 0.0 | -1.39 | 0.65 | 0.87 | 3.70 | 3.1 | 0.003 | 0.53 | 0.0 | 0.04 | 16.00 | 0.00 | 1.962 | 3.37 | 1.68 | 2.2 | 97.8 | 0.0 | 0.72 | 1.61 | 0.66 | 0.87 | 2.53 | 9578 | 1162 | 3 | 0 | 25 | 0 | 0 | logfile |
✔ | 8B0F | 15779 | 2023-09-29 | 2022-09-07 | 3.0 | 3.33 | 3.08 | 3.1 | 0.004 | 0.75 | 0.0 | 0.05 | 14.65 | 0.01 | 2.067 | 4.43 | 1.40 | 7.8 | 92.2 | 0.0 | -1.39 | 0.81 | 0.81 | 3.23 | 3.1 | 0.004 | 0.65 | 0.0 | 0.04 | 15.05 | 0.00 | 1.918 | 6.32 | 0.91 | 5.0 | 95.0 | 0.0 | -0.12 | 1.37 | 0.81 | 0.82 | 2.96 | 60654 | 3910 | 12 | 0 | 9 | 0 | 29718 | logfile |
✔ | 6S6L | 10103 | 2023-09-30 | 2019-07-03 | 3.1 | 2.99 | 2.95 | 2.9 | 0.014 | 1.12 | 0.0 | 0.07 | 9.31 | 0.01 | 2.263 | 5.39 | 0.16 | 5.3 | 94.7 | 0.0 | -2.85 | 0.39 | 0.65 | 3.67 | 2.9 | 0.002 | 0.59 | 0.0 | 0.04 | 12.12 | 0.01 | 2.158 | 8.90 | 0.24 | 3.5 | 96.5 | 0.0 | -0.82 | 0.55 | 0.40 | 0.66 | 2.99 | 11587 | 1510 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Z0o | 14428 | 2023-09-30 | 2022-02-23 | 2.8 | 1.99 | 2.70 | 1.8 | 0.004 | 0.66 | 0.0 | 0.04 | 19.63 | 0.00 | 2.189 | 6.20 | 1.42 | 1.7 | 98.3 | 0.0 | 1.08 | 0.68 | 0.73 | 3.27 | 1.7 | 0.004 | 0.59 | 0.0 | 0.04 | 21.28 | 0.00 | 2.134 | 9.34 | 3.46 | 2.5 | 97.5 | 0.0 | 1.84 | 0.50 | 0.77 | 0.79 | 3.27 | 11864 | 1256 | 10 | 78 | 0 | 0 | 0 | logfile |
✔ | 6X0L | 21978 | 2023-09-28 | 2020-05-16 | 3.9 | 3.69 | — | 3.6 | 0.005 | 0.85 | 0.0 | 0.05 | 18.72 | 0.00 | 2.067 | 21.30 | 0.13 | 5.0 | 95.0 | 0.0 | -1.57 | 0.59 | 0.67 | 1.05 | 3.5 | 0.003 | 0.78 | 0.0 | 0.04 | 20.20 | 0.00 | 2.182 | 19.25 | 0.77 | 5.0 | 95.0 | 0.0 | 0.15 | 0.68 | 0.60 | 0.68 | 1.31 | 8037 | 894 | 7 | 40 | 0 | 0 | 0 | logfile |