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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6CB1 | 7445 | 2023-08-17 | 2018-02-01 | 4.6 | 4.77 | — | 4.6 | 0.006 | 1.02 | 0.0 | 0.06 | 16.94 | 0.00 | 0.266 | 5.97 | 0.00 | 5.0 | 94.8 | 0.1 | -2.68 | 0.66 | 0.49 | — | 4.5 | 0.004 | 0.78 | 0.0 | 0.04 | 17.69 | 0.00 | 2.044 | 20.20 | 0.00 | 8.1 | 91.9 | 0.0 | -1.18 | 1.99 | 0.75 | 0.75 | — | 69945 | 6459 | 42 | 1615 | 694 | 0 | 0 | logfile |
✔ | 6RFS | 4874 | 2023-08-11 | 2019-04-16 | 4.04 | 4.52 | — | 4.1 | 0.010 | 1.26 | 0.0 | 0.94 | 10.33 | 0.01 | 2.078 | 8.88 | 0.15 | 8.3 | 91.5 | 0.2 | -4.08 | 0.83 | 0.83 | — | 4.1 | 0.008 | 1.57 | 0.0 | 0.29 | 11.95 | 0.00 | 2.089 | 15.73 | 0.00 | 5.9 | 94.1 | 0.0 | -0.68 | 1.38 | 0.83 | 0.84 | — | 60966 | 7685 | 49 | 0 | 12 | 0 | 0 | logfile |
✔ | 8B0i | 15784 | 2023-08-15 | 2022-09-07 | 4.28 | 5.23 | 4.35 | 4.5 | 0.012 | 1.98 | 1.0 | 0.11 | 22.56 | 0.01 | 1.911 | 8.92 | 0.14 | 5.1 | 94.9 | 0.0 | -1.62 | 0.77 | 0.61 | — | 4.5 | 0.002 | 0.59 | 0.0 | 0.04 | 20.65 | 0.00 | 1.974 | 14.00 | 0.00 | 5.1 | 94.9 | 0.0 | 0.38 | 1.42 | 0.80 | 0.74 | — | 17636 | 1075 | 5 | 103 | 0 | 0 | 7831 | logfile |
✔ | 7SAM | 24952 | 2023-08-09 | 2021-09-22 | 4.3 | 6.95 | 4.38 | 4.2 | 0.001 | 0.39 | 0.0 | 0.02 | 13.28 | 0.00 | 1.952 | 2.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.84 | 0.51 | — | 4.3 | 0.007 | 0.88 | 0.0 | 0.04 | 22.84 | 0.01 | 1.820 | 82.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 5.78 | 0.96 | 0.87 | — | 5399 | 0 | 1 | 169 | 0 | 0 | 1802 | logfile |
✔ | 7Q59 | 13829 | 2023-08-26 | 2021-11-03 | 4.36 | 4.89 | — | 4.4 | 0.003 | 0.63 | 0.0 | 0.04 | 10.22 | 0.00 | 1.925 | 6.09 | 0.72 | 3.6 | 96.4 | 0.0 | -0.17 | 0.79 | 0.65 | — | 4.4 | 0.003 | 0.66 | 0.0 | 0.04 | 11.81 | 0.00 | 2.036 | 13.79 | 0.00 | 3.7 | 96.3 | 0.0 | -0.11 | 1.44 | 0.90 | 0.83 | — | 47632 | 6118 | 14 | 0 | 6 | 0 | 0 | logfile |
✔ | 6GJ3 | 0010 | 2023-08-15 | 2018-05-15 | 4.3 | 4.02 | — | 3.9 | 0.008 | 1.19 | 0.0 | 0.06 | 10.34 | 0.01 | 2.248 | 5.14 | 0.37 | 13.5 | 86.2 | 0.3 | -4.76 | 0.71 | 0.78 | — | 3.9 | 0.003 | 0.73 | 0.0 | 0.04 | 12.36 | 0.01 | 2.209 | 10.28 | 0.00 | 10.8 | 89.2 | 0.0 | -1.74 | 0.76 | 0.71 | 0.78 | — | 17405 | 2194 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q8S | 13865 | 2023-08-16 | 2021-11-11 | 3.4 | 3.39 | 3.35 | 3.3 | 0.002 | 0.44 | 0.0 | 0.04 | 8.15 | 0.00 | 2.222 | 3.32 | 0.23 | 2.1 | 97.9 | 0.0 | 1.31 | 0.68 | 0.86 | 4.17 | 3.3 | 0.003 | 0.56 | 0.0 | 0.05 | 12.98 | 0.00 | 2.140 | 4.19 | 0.00 | 3.2 | 96.8 | 0.0 | 0.86 | 0.55 | 0.70 | 0.89 | 3.69 | 19665 | 2485 | 15 | 0 | 10 | 0 | 0 | logfile |
✔ | 6GCS | 4384 | 2023-08-10 | 2018-04-19 | 4.32 | 4.51 | — | 4.3 | 0.010 | 1.35 | 3.0 | 0.97 | 12.02 | 0.01 | 2.231 | 8.79 | 0.73 | 13.4 | 85.9 | 0.8 | -4.79 | 0.77 | 0.78 | — | 4.3 | 0.009 | 1.69 | 0.0 | 0.30 | 12.66 | 0.00 | 2.049 | 20.03 | 0.00 | 13.2 | 86.5 | 0.3 | -2.20 | 0.78 | 0.78 | 0.79 | — | 55137 | 6864 | 53 | 0 | 667 | 0 | 0 | logfile |
✔ | 7VAK | 31845 | 2023-08-20 | 2021-08-30 | 4.7 | 3.87 | 4.25 | 4.0 | 0.003 | 0.55 | 0.0 | 0.04 | 13.32 | 0.00 | 2.115 | 9.01 | 0.00 | 2.9 | 97.1 | 0.0 | 0.43 | 0.71 | 0.75 | — | 3.8 | 0.004 | 0.68 | 0.0 | 0.05 | 14.06 | 0.00 | 2.126 | 11.27 | 0.00 | 4.7 | 95.3 | 0.0 | -0.10 | 1.25 | 0.72 | 0.77 | — | 29462 | 3788 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K8Y | 22735 | 2023-08-19 | 2020-09-27 | 4.4 | 5.34 | — | 4.4 | 0.003 | 0.55 | 0.0 | 0.05 | 10.63 | 0.00 | 1.137 | 21.70 | 0.04 | 2.8 | 97.0 | 0.3 | -2.11 | 0.80 | 0.77 | — | 4.4 | 0.002 | 0.60 | 0.0 | 0.04 | 11.27 | 0.00 | 2.109 | 12.37 | 0.00 | 3.6 | 96.2 | 0.1 | -0.32 | 1.11 | 0.81 | 0.81 | — | 25560 | 3242 | 8 | 0 | 23 | 0 | 0 | logfile |
✔ | 7NVW | 12615 | 2023-08-17 | 2021-03-16 | 4.3 | 4.32 | 4.26 | 4.2 | 0.002 | 0.45 | 0.0 | 0.04 | 15.45 | 0.00 | 1.971 | 6.64 | 0.00 | 4.4 | 95.6 | 0.0 | 0.80 | 0.71 | 0.66 | — | 4.2 | 0.003 | 0.70 | 0.0 | 0.04 | 15.77 | 0.00 | 2.146 | 15.97 | 0.00 | 4.7 | 95.2 | 0.0 | -0.42 | 1.05 | 0.73 | 0.68 | — | 23647 | 2814 | 17 | 42 | 35 | 0 | 0 | logfile |
✔ | 8BD6 | 15976 | 2023-08-20 | 2022-10-18 | 4.1 | 5.46 | 4.05 | 4.2 | 0.009 | 1.37 | 18.0 | 0.09 | 21.21 | 0.01 | 1.062 | 17.28 | 8.81 | 2.2 | 97.8 | 0.0 | -2.08 | 0.71 | 0.61 | — | 3.7 | 0.003 | 0.72 | 0.0 | 0.04 | 18.32 | 0.00 | 1.857 | 26.12 | 0.00 | 4.7 | 95.3 | 0.0 | -1.16 | 2.03 | 0.74 | 0.63 | — | 29951 | 2900 | 24 | 313 | 18 | 0 | 0 | logfile |
✔ | 7SSV | 25414 | 2023-08-13 | 2021-11-11 | 3.39 | 3.66 | — | 3.6 | 0.018 | 1.72 | 20.0 | 0.11 | 14.84 | 0.01 | 2.215 | 4.74 | 6.26 | 6.6 | 93.4 | 0.0 | -3.22 | 0.64 | 0.81 | 2.90 | 3.7 | 0.002 | 0.61 | 0.0 | 0.04 | 15.24 | 0.00 | 2.239 | 5.42 | 0.00 | 3.9 | 96.1 | 0.1 | 0.91 | 1.10 | 0.66 | 0.85 | 1.83 | 13815 | 1874 | 8 | 0 | 3 | 0 | 0 | logfile |
✔ | 8HAK | 34594 | 2023-08-14 | 2022-10-26 | 4.5 | 4.61 | 4.45 | 3.6 | 0.003 | 0.65 | 0.0 | 0.04 | 24.84 | 0.00 | 2.214 | 12.85 | 0.00 | 2.2 | 97.8 | 0.0 | 0.55 | 0.87 | 0.75 | — | 3.6 | 0.004 | 0.67 | 0.0 | 0.04 | 26.53 | 0.00 | 2.177 | 17.46 | 0.00 | 3.3 | 96.7 | 0.0 | 0.66 | 0.82 | 0.89 | 0.81 | — | 16342 | 1285 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 7NG4 | 12307 | 2023-08-18 | 2021-02-08 | 4.4 | 5.07 | 4.36 | 3.9 | 0.010 | 1.37 | 0.0 | 0.06 | 13.12 | 0.01 | 1.977 | 6.38 | 0.12 | 7.3 | 92.7 | 0.0 | -2.19 | 0.89 | 0.78 | — | 3.9 | 0.003 | 0.57 | 0.0 | 0.04 | 12.78 | 0.00 | 1.773 | 12.19 | 0.00 | 4.7 | 95.3 | 0.0 | -0.92 | 0.97 | 0.88 | 0.79 | — | 74624 | 4656 | 13 | 0 | 31 | 0 | 37485 | logfile |
✔ | 6FU8 | 4319 | 2023-08-09 | 2018-02-26 | 3.2 | 4.43 | 2.98 | 3.8 | 0.013 | 2.11 | 2.0 | 0.10 | 20.18 | 0.02 | 2.617 | 1.47 | 2.78 | 11.2 | 86.2 | 2.5 | -3.87 | 0.17 | 0.42 | 2.23 | 4.1 | 0.004 | 0.85 | 0.0 | 0.04 | 15.02 | 0.00 | 2.243 | 16.86 | 0.00 | 11.2 | 87.5 | 1.2 | -1.85 | 3.09 | 0.23 | 0.62 | -0.89 | 1364 | 82 | 1 | 0 | 0 | 0 | 711 | logfile |
✔ | 5MS1 | 3562 | 2023-08-09 | 2016-12-29 | 4.25 | 4.22 | — | 4.2 | 0.014 | 1.51 | 0.0 | 0.07 | 9.30 | 0.01 | 2.413 | 2.10 | 0.00 | 5.5 | 93.5 | 1.1 | -0.81 | 0.37 | 0.76 | — | 4.2 | 0.003 | 0.67 | 0.0 | 0.04 | 12.79 | 0.00 | 2.136 | 9.78 | 0.00 | 2.9 | 97.1 | 0.0 | -0.39 | 1.54 | 0.46 | 0.85 | — | 4350 | 556 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SB3 | 40289 | 2023-08-24 | 2023-04-02 | 4.1 | 4.41 | 4.14 | 4.2 | 0.007 | 1.04 | 0.0 | 0.05 | 14.16 | 0.01 | 2.138 | 2.68 | 0.00 | 7.6 | 91.9 | 0.5 | -2.11 | 0.74 | 0.73 | — | 4.2 | 0.004 | 0.71 | 0.0 | 0.04 | 13.52 | 0.00 | 1.922 | 14.29 | 0.00 | 9.3 | 90.3 | 0.5 | -2.28 | 1.35 | 0.77 | 0.78 | — | 38690 | 2460 | 24 | 0 | 79 | 0 | 18600 | logfile |
✔ | 7JLX | 22383 | 2023-08-09 | 2020-07-30 | 4.6 | 3.86 | — | 3.7 | 0.001 | 0.42 | 0.0 | 0.04 | 3.80 | 0.00 | 2.240 | 2.96 | 0.00 | 6.7 | 93.3 | 0.0 | 1.23 | 0.54 | 0.51 | — | 3.8 | 0.003 | 0.75 | 0.0 | 0.04 | 7.17 | 0.00 | 2.306 | 8.03 | 0.00 | 17.7 | 82.3 | 0.0 | -2.25 | 2.42 | 0.48 | 0.53 | — | 3288 | 664 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JJJ | 22354 | 2023-08-10 | 2020-07-26 | 4.5 | 4.63 | 4.47 | 4.5 | 0.020 | 1.79 | 0.0 | 0.13 | 10.01 | 0.01 | 2.377 | 0.90 | 0.07 | 2.0 | 98.0 | 0.0 | 0.68 | 0.79 | 0.80 | — | 4.5 | 0.004 | 0.71 | 0.0 | 0.05 | 12.38 | 0.00 | 2.113 | 11.30 | 0.00 | 4.0 | 96.0 | 0.0 | -0.22 | 1.44 | 0.80 | 0.83 | — | 54614 | 6674 | 92 | 0 | 182 | 0 | 0 | logfile |