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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Z2A | 14459 | 2024-03-15 | 2022-02-26 | 4.3 | 4.49 | — | 4.3 | 0.012 | 1.59 | 2.0 | 0.09 | 14.75 | 0.01 | 0.925 | 8.38 | 0.48 | 2.8 | 97.0 | 0.2 | 0.00 | 0.80 | 0.62 | — | 4.2 | 0.003 | 0.58 | 0.0 | 0.04 | 14.31 | 0.00 | 1.816 | 56.02 | 0.00 | 4.4 | 95.6 | 0.1 | 0.33 | 1.81 | 0.90 | 0.80 | — | 12244 | 1201 | 5 | 0 | 4 | 0 | 2765 | logfile |
✔ | 7F46 | 31444 | 2024-03-11 | 2021-06-17 | 4.79 | 5.15 | — | 3.3 | 0.006 | 0.84 | 0.0 | 0.05 | 13.32 | 0.01 | 2.218 | 12.18 | 0.00 | 8.9 | 91.1 | 0.0 | -2.90 | 0.77 | 0.60 | — | 4.4 | 0.003 | 0.78 | 0.0 | 0.05 | 12.93 | 0.01 | 2.102 | 17.68 | 0.00 | 6.8 | 93.2 | 0.0 | -1.99 | 1.91 | 0.79 | 0.63 | — | 6564 | 842 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7NKi | 12440 | 2024-03-20 | 2021-02-18 | 4.67 | 4.96 | — | 4.6 | 0.004 | 0.67 | 0.0 | 0.04 | 14.26 | 0.01 | 1.908 | 8.85 | 0.00 | 4.0 | 96.0 | 0.0 | -0.64 | 0.67 | 0.41 | — | 4.6 | 0.004 | 0.69 | 0.0 | 0.04 | 14.72 | 0.01 | 1.866 | 21.82 | 0.00 | 6.4 | 93.6 | 0.0 | -1.05 | 2.35 | 0.80 | 0.65 | — | 28775 | 1794 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 7NK2 | 12429 | 2024-03-20 | 2021-02-17 | 4.84 | 4.93 | — | 4.8 | 0.004 | 0.73 | 2.0 | 0.05 | 14.37 | 0.01 | 1.907 | 8.81 | 0.32 | 4.3 | 95.7 | 0.0 | -0.71 | 0.61 | 0.43 | — | 4.8 | 0.004 | 0.69 | 0.0 | 0.04 | 14.51 | 0.00 | 1.824 | 19.86 | 0.00 | 6.7 | 93.3 | 0.0 | -1.01 | 4.60 | 0.73 | 0.67 | — | 28776 | 1794 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 7NJ7 | 12375 | 2024-03-20 | 2021-02-16 | 4.82 | 5.23 | — | 4.8 | 0.004 | 0.73 | 1.0 | 0.04 | 14.45 | 0.01 | 1.907 | 8.72 | 0.19 | 4.3 | 95.7 | 0.0 | -0.72 | 0.74 | 0.46 | — | 4.9 | 0.002 | 0.60 | 0.0 | 0.04 | 14.23 | 0.00 | 1.874 | 16.32 | 0.00 | 4.0 | 96.0 | 0.0 | -0.47 | 2.33 | 0.82 | 0.63 | — | 28818 | 1797 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 5LiJ | 4054 | 2024-03-10 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.64 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.005 | 1.17 | 0.0 | 0.04 | 10.44 | 0.00 | 2.149 | 15.78 | 0.00 | 35.3 | 64.7 | 0.0 | -5.53 | 1.48 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8RBX | 19038 | 2024-03-16 | 2023-12-05 | 4.1 | 4.04 | 3.99 | 7.7 | 0.007 | 0.91 | 2.0 | 0.07 | 18.74 | 0.01 | 2.138 | 5.09 | 0.56 | 4.8 | 95.2 | 0.0 | -0.02 | 0.71 | 0.32 | — | 3.0 | 0.010 | 1.06 | 1.0 | 0.05 | 16.40 | 0.01 | 1.822 | 33.06 | 0.00 | 6.7 | 93.1 | 0.2 | -0.59 | 1.81 | 0.77 | 0.55 | — | 129226 | 16906 | 56 | 326 | 76 | 0 | 0 | logfile |
✔ | 8U1D | 41810 | 2024-03-10 | 2023-08-31 | 4.25 | 4.46 | 4.28 | 4.4 | 0.006 | 1.05 | 0.0 | 0.06 | 13.61 | 0.01 | 2.280 | 9.04 | 0.52 | 7.9 | 91.7 | 0.3 | -2.32 | 0.68 | 0.73 | — | 4.4 | 0.003 | 0.66 | 0.0 | 0.04 | 13.55 | 0.00 | 2.153 | 11.43 | 0.00 | 7.0 | 92.8 | 0.2 | -1.26 | 1.62 | 0.71 | 0.75 | — | 5109 | 650 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 6R23 | 4708 | 2024-03-10 | 2019-03-15 | 4.9 | 4.57 | — | 4.6 | 0.006 | 1.07 | 0.0 | 0.05 | 16.56 | 0.01 | 2.332 | 7.52 | 0.00 | 7.9 | 92.1 | 0.0 | -4.61 | 0.60 | 0.75 | — | 4.6 | 0.003 | 0.65 | 0.0 | 0.03 | 16.46 | 0.00 | 2.358 | 8.83 | 0.00 | 6.7 | 93.3 | 0.0 | 0.64 | 3.59 | 0.60 | 0.73 | — | 1518 | 182 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8C89 | 16473 | 2024-03-10 | 2023-01-19 | 4.41 | 3.51 | 3.83 | 2.2 | 0.007 | 1.10 | 0.0 | 0.09 | 14.36 | 0.01 | 2.149 | 25.75 | 0.71 | 10.4 | 89.3 | 0.3 | -2.47 | 0.75 | 0.77 | — | 2.1 | 0.005 | 0.84 | 0.0 | 0.05 | 13.56 | 0.01 | 2.119 | 33.70 | 0.00 | 13.8 | 86.1 | 0.2 | -2.03 | 0.59 | 0.70 | 0.65 | — | 5106 | 652 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 8FL8 | 29270 | 2024-03-23 | 2022-12-21 | 4.2 | 4.73 | 3.73 | 4.0 | 0.003 | 0.72 | 0.0 | 0.04 | 14.24 | 0.00 | 1.962 | 16.11 | 0.05 | 5.7 | 94.1 | 0.2 | -0.48 | 0.84 | 0.76 | — | 4.1 | 0.005 | 0.73 | 0.0 | 0.04 | 14.23 | 0.00 | 1.809 | 21.98 | 0.00 | 6.9 | 92.9 | 0.2 | -0.38 | 1.23 | 0.87 | 0.85 | — | 38784 | 5098 | 32 | 0 | 10 | 0 | 0 | logfile |
✔ | 8T53 | 41042 | 2024-03-11 | 2023-06-12 | 4.1 | 4.29 | 4.68 | 4.1 | 0.002 | 0.59 | 0.0 | 0.04 | 12.60 | 0.00 | 2.201 | 11.96 | 0.00 | 1.8 | 98.2 | 0.0 | 0.81 | 0.45 | 0.45 | — | 4.1 | 0.002 | 0.60 | 0.0 | 0.04 | 13.37 | 0.00 | 2.225 | 11.66 | 0.00 | 2.3 | 97.7 | 0.0 | 1.65 | 0.60 | 0.46 | 0.47 | — | 6660 | 796 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q72 | 18201 | 2024-03-18 | 2023-08-15 | 4.17 | 4.49 | 4.20 | 4.2 | 0.004 | 0.65 | 0.0 | 0.04 | 18.07 | 0.00 | 1.906 | 6.35 | 0.00 | 3.5 | 96.4 | 0.0 | -0.10 | 0.82 | 0.74 | — | 4.2 | 0.004 | 0.58 | 0.0 | 0.04 | 17.54 | 0.00 | 1.847 | 10.36 | 0.00 | 6.8 | 93.2 | 0.0 | -0.44 | 0.39 | 0.83 | 0.78 | — | 84342 | 4946 | 20 | 160 | 4 | 0 | 41352 | logfile |
✔ | 8TVQ | 41648 | 2024-03-11 | 2023-08-18 | 4.6 | 5.27 | 4.92 | 4.7 | 0.004 | 0.74 | 0.0 | 0.04 | 15.49 | 0.01 | 1.187 | 17.40 | 0.00 | 6.4 | 93.6 | 0.1 | -1.44 | 0.84 | 0.74 | — | 4.7 | 0.003 | 0.61 | 0.0 | 0.04 | 15.83 | 0.00 | 1.839 | 17.80 | 0.00 | 6.8 | 93.1 | 0.1 | -1.05 | 0.54 | 0.84 | 0.75 | — | 57710 | 3424 | 20 | 100 | 443 | 0 | 26856 | logfile |
✔ | 8TVS | 41650 | 2024-03-11 | 2023-08-18 | 4.4 | 4.59 | 4.48 | 4.1 | 0.004 | 0.77 | 0.0 | 0.05 | 15.19 | 0.00 | 1.713 | 10.23 | 0.00 | 4.5 | 95.5 | 0.1 | -0.62 | 0.83 | 0.76 | — | 4.1 | 0.003 | 0.51 | 0.0 | 0.04 | 15.41 | 0.00 | 1.893 | 12.80 | 0.00 | 5.7 | 94.2 | 0.1 | 0.02 | 0.47 | 0.84 | 0.77 | — | 56913 | 3697 | 22 | 104 | 443 | 0 | 24971 | logfile |
✔ | 8AKT | 15492 | 2024-03-10 | 2022-07-31 | 4.4 | 5.10 | 4.49 | 4.5 | 0.004 | 0.61 | 0.0 | 0.03 | 14.81 | 0.00 | 2.020 | 11.71 | 0.00 | 1.5 | 98.5 | 0.0 | 0.62 | 0.90 | 0.85 | — | 4.5 | 0.002 | 0.57 | 0.0 | 0.03 | 14.59 | 0.00 | 1.819 | 47.84 | 0.00 | 1.5 | 98.5 | 0.0 | 4.92 | 2.08 | 0.90 | 0.86 | — | 107640 | 11760 | 120 | 0 | 60 | 0 | 11400 | logfile |
✔ | 8G7C | 29806 | 2024-03-17 | 2023-02-16 | 4.1 | 4.39 | 4.21 | 4.2 | 0.004 | 0.73 | 0.0 | 0.05 | 12.95 | 0.01 | 2.076 | 15.52 | 0.10 | 4.8 | 95.1 | 0.1 | -1.27 | 0.68 | 0.62 | — | 4.2 | 0.004 | 0.73 | 0.0 | 0.05 | 13.08 | 0.00 | 2.089 | 15.44 | 0.00 | 7.5 | 92.4 | 0.1 | -1.61 | 0.85 | 0.73 | 0.73 | — | 17466 | 2193 | 9 | 0 | 12 | 0 | 0 | logfile |
✔ | 8UPT | 42455 | 2024-03-10 | 2023-10-23 | 2.8 | 3.38 | 2.84 | 2.9 | 0.016 | 2.20 | 0.0 | 0.16 | 30.45 | 0.01 | 1.072 | 99.56 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.23 | 0.59 | — | 2.9 | 0.005 | 0.73 | 0.0 | 0.04 | 27.91 | 0.01 | 2.113 | 22.27 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.95 | 0.28 | 0.87 | — | 1518 | 0 | 1 | 71 | 0 | 0 | 0 | logfile |
✔ | 6SHS | 10204 | 2024-03-11 | 2019-08-08 | 4.4 | 4.36 | — | 4.3 | 0.009 | 1.02 | 0.0 | 0.06 | 12.04 | 0.00 | 2.341 | 25.68 | 0.00 | 21.1 | 78.9 | 0.0 | -5.87 | 0.69 | 0.62 | — | 4.3 | 0.003 | 0.68 | 0.0 | 0.05 | 12.88 | 0.00 | 2.263 | 7.54 | 0.00 | 16.2 | 83.8 | 0.0 | -5.34 | 1.15 | 0.72 | 0.70 | — | 7068 | 480 | 12 | 0 | 0 | 0 | 3408 | logfile |
✔ | 7NJ5 | 12373 | 2024-03-20 | 2021-02-16 | 4.63 | 4.97 | — | 4.6 | 0.004 | 0.73 | 1.0 | 0.05 | 14.35 | 0.01 | 1.907 | 8.73 | 0.32 | 4.3 | 95.7 | 0.0 | -0.71 | 0.75 | 0.49 | — | 4.7 | 0.003 | 0.62 | 0.0 | 0.04 | 14.70 | 0.00 | 1.988 | 17.15 | 0.00 | 3.8 | 96.2 | 0.0 | -0.57 | 2.35 | 0.83 | 0.67 | — | 28806 | 1800 | 6 | 23 | 0 | 0 | 13868 | logfile |