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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6LHW | 0901 | 2023-02-21 | 2019-12-10 | 4.84 | 5.29 | — | 4.6 | 0.008 | 1.37 | 1.0 | 0.05 | 5.28 | 0.00 | 1.530 | 14.43 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.64 | 0.56 | — | 4.6 | 0.008 | 1.29 | 0.0 | 0.04 | 6.56 | 0.00 | 2.027 | 44.00 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.20 | 0.83 | 0.64 | — | 7644 | 0 | 3 | 0 | 1541 | 0 | 0 | logfile |
✔ | 6B5V | 7058 | 2023-02-23 | 2017-09-29 | 4.8 | 4.85 | — | 4.8 | 0.008 | 1.23 | 0.0 | 0.06 | 13.98 | 0.01 | 2.333 | 9.06 | 3.55 | 5.9 | 94.1 | 0.0 | -4.79 | 0.61 | 0.72 | — | 4.8 | 0.003 | 0.80 | 0.0 | 0.04 | 13.10 | 0.00 | 2.149 | 12.86 | 0.00 | 6.5 | 93.5 | 0.0 | -1.76 | 0.89 | 0.70 | 0.81 | — | 18933 | 2356 | 8 | 0 | 5 | 0 | 0 | logfile |
✔ | 5LJo | 4061 | 2023-02-25 | 2016-07-19 | 4.9 | 7.28 | — | 5.9 | 0.014 | 1.69 | 1.0 | 0.08 | 11.01 | 0.01 | 2.147 | 5.45 | 0.15 | 9.4 | 86.8 | 3.8 | -2.52 | 0.69 | 0.58 | — | 5.9 | 0.003 | 0.67 | 0.0 | 0.04 | 12.72 | 0.00 | 1.935 | 15.16 | 0.00 | 10.8 | 88.9 | 0.3 | -2.08 | 1.31 | 0.79 | 0.79 | — | 24947 | 1624 | 5 | 0 | 0 | 0 | 12255 | logfile |
✔ | 6T8G | 10400 | 2023-02-22 | 2019-10-24 | 4.34 | 4.41 | — | 4.3 | 0.008 | 1.12 | 0.0 | 0.06 | 13.12 | 0.01 | 2.228 | 7.19 | 0.15 | 10.2 | 89.8 | 0.0 | -4.29 | 0.81 | 0.83 | — | 4.3 | 0.004 | 0.81 | 0.0 | 0.05 | 14.28 | 0.00 | 2.106 | 16.21 | 0.00 | 6.7 | 93.3 | 0.0 | -0.84 | 1.37 | 0.82 | 0.83 | — | 18875 | 2367 | 14 | 32 | 6 | 0 | 0 | logfile |
✔ | 6PoM | 20416 | 2023-02-17 | 2019-07-04 | 4.9 | 5.01 | — | 5.0 | 0.003 | 0.64 | 0.0 | 0.03 | 17.29 | 0.00 | 2.075 | 3.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.61 | 0.64 | — | 5.0 | 0.010 | 1.28 | 0.0 | 0.06 | 21.46 | 0.01 | 1.930 | 61.80 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.76 | 0.75 | 0.80 | — | 4937 | 0 | 2 | 230 | 0 | 0 | 0 | logfile |
✔ | 7WB1 | 32392 | 2023-02-20 | 2021-12-15 | 3.7 | 3.09 | — | 3.0 | 0.003 | 0.59 | 0.0 | 0.04 | 19.51 | 0.00 | 2.046 | 11.12 | 0.00 | 4.7 | 95.2 | 0.1 | 0.55 | 0.83 | 0.75 | 0.94 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 20.37 | 0.00 | 2.084 | 14.67 | 0.00 | 5.2 | 94.8 | 0.0 | 0.33 | 1.01 | 0.83 | 0.76 | 1.29 | 11524 | 960 | 4 | 178 | 0 | 0 | 0 | logfile |
✔ | 7XZX | 33533 | 2023-02-23 | 2022-06-03 | 4.53 | 5.42 | 4.49 | 4.5 | 0.006 | 0.99 | 0.0 | 0.06 | 25.64 | 0.00 | 1.688 | 10.77 | 0.15 | 1.7 | 98.3 | 0.0 | 0.69 | 0.69 | 0.37 | — | 4.4 | 0.004 | 0.65 | 0.0 | 0.04 | 25.63 | 0.00 | 2.095 | 14.00 | 0.00 | 2.6 | 97.4 | 0.0 | 1.09 | 1.71 | 0.90 | 0.82 | — | 19270 | 1554 | 14 | 342 | 0 | 0 | 0 | logfile |
✔ | 6HiS | 0228 | 2023-02-22 | 2018-08-30 | 4.5 | 4.60 | — | 4.5 | 0.010 | 1.55 | 0.0 | 0.08 | 11.89 | 0.01 | 2.228 | 16.64 | 0.29 | 4.9 | 95.1 | 0.0 | -2.60 | 0.76 | 0.77 | — | 4.5 | 0.003 | 0.77 | 0.0 | 0.05 | 13.36 | 0.00 | 2.228 | 13.02 | 0.00 | 7.8 | 92.2 | 0.0 | -1.77 | 0.93 | 0.76 | 0.77 | — | 16240 | 1935 | 25 | 0 | 40 | 0 | 0 | logfile |
✔ | 7SWo | 25477 | 2023-02-17 | 2021-11-20 | 4.1 | 3.78 | — | 3.8 | 0.007 | 0.89 | 0.0 | 0.05 | 14.43 | 0.01 | 2.215 | 26.02 | 0.19 | 10.0 | 90.0 | 0.0 | -2.59 | 0.65 | 0.76 | — | 3.8 | 0.003 | 0.72 | 0.0 | 0.05 | 13.81 | 0.01 | 2.118 | 18.05 | 0.00 | 6.0 | 94.0 | 0.0 | -1.25 | 0.53 | 0.64 | 0.74 | — | 4784 | 627 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oAA | 0666 | 2023-02-23 | 2019-03-15 | 4.1 | 4.22 | 4.19 | 4.2 | 0.006 | 1.06 | 1.0 | 0.05 | 16.65 | 0.01 | 1.317 | 13.46 | 0.34 | 8.3 | 91.5 | 0.3 | -5.52 | 0.63 | 0.70 | — | 4.2 | 0.003 | 0.83 | 0.0 | 0.05 | 15.51 | 0.00 | 1.082 | 14.28 | 0.00 | 9.7 | 90.2 | 0.1 | -2.15 | 0.88 | 0.66 | 0.75 | — | 19546 | 2494 | 10 | 0 | 14 | 0 | 0 | logfile |
✔ | 6K9L | 9950 | 2023-02-27 | 2019-06-16 | 4.27 | 4.50 | — | 4.2 | 0.001 | 0.49 | 0.0 | 0.04 | 9.31 | 0.00 | 2.240 | 4.75 | 4.95 | 4.6 | 95.4 | 0.0 | -3.11 | 0.84 | 0.71 | — | 4.2 | 0.002 | 0.68 | 0.0 | 0.04 | 9.69 | 0.00 | 2.113 | 12.20 | 0.00 | 7.1 | 92.9 | 0.0 | 0.72 | 1.80 | 0.85 | 0.75 | — | 30601 | 5103 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VPZ | 32077 | 2023-02-27 | 2021-10-18 | 4.14 | 4.38 | 4.16 | 4.1 | 0.005 | 0.79 | 1.0 | 0.05 | 18.57 | 0.00 | 1.887 | 6.54 | 0.52 | 3.6 | 96.3 | 0.0 | -0.02 | 0.81 | 0.71 | — | 4.2 | 0.003 | 0.69 | 0.0 | 0.04 | 18.61 | 0.00 | 1.968 | 17.15 | 0.00 | 3.2 | 96.8 | 0.0 | -0.08 | 0.71 | 0.83 | 0.75 | — | 30593 | 3474 | 14 | 173 | 9 | 0 | 0 | logfile |
✔ | 5YYS | 6859 | 2023-02-24 | 2017-12-11 | 4.2 | 4.57 | — | 4.1 | 0.016 | 2.26 | 0.0 | 0.10 | 15.30 | 0.01 | 2.201 | 22.76 | 2.34 | 27.3 | 70.1 | 2.6 | -5.98 | 0.85 | 0.71 | — | 4.1 | 0.005 | 1.30 | 0.0 | 0.06 | 12.76 | 0.01 | 2.047 | 36.43 | 0.00 | 24.1 | 75.3 | 0.6 | -3.96 | 1.66 | 0.87 | 0.73 | — | 24044 | 3244 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UA2 | 20704 | 2023-02-28 | 2019-09-10 | 4.2 | 4.44 | 4.05 | 4.4 | 0.017 | 1.74 | 0.0 | 0.08 | 16.71 | 0.01 | 2.191 | 14.11 | 4.10 | 11.3 | 88.7 | 0.1 | -4.76 | 0.65 | 0.78 | — | 4.4 | 0.003 | 0.92 | 0.0 | 0.05 | 14.43 | 0.01 | 2.104 | 22.04 | 0.00 | 8.5 | 91.4 | 0.0 | -2.75 | 1.68 | 0.64 | 0.76 | — | 31660 | 4016 | 24 | 0 | 36 | 0 | 0 | logfile |
✔ | 6PEK | 20327 | 2023-02-20 | 2019-06-20 | 4.2 | 4.25 | — | 4.2 | 0.005 | 0.73 | 0.0 | 0.03 | 13.79 | 0.00 | 1.913 | 4.42 | 0.00 | 0.8 | 99.2 | 0.0 | -2.47 | 0.70 | 0.74 | — | 4.2 | 0.003 | 0.74 | 0.0 | 0.04 | 14.87 | 0.00 | 1.129 | 14.37 | 0.00 | 3.0 | 97.0 | 0.0 | -0.34 | 0.99 | 0.71 | 0.77 | — | 11106 | 1405 | 11 | 0 | 13 | 0 | 0 | logfile |
✔ | 8AUR | 15673 | 2023-02-17 | 2022-08-25 | 3.47 | 3.44 | 3.63 | 3.6 | 0.002 | 0.54 | 0.0 | 0.04 | 13.41 | 0.00 | 2.350 | 6.62 | 0.00 | 5.6 | 94.4 | 0.0 | -1.30 | 0.72 | 0.82 | 2.41 | 3.5 | 0.004 | 0.66 | 0.0 | 0.04 | 16.10 | 0.00 | 2.233 | 7.09 | 0.00 | 9.4 | 90.5 | 0.1 | -1.38 | 1.66 | 0.71 | 0.83 | 2.56 | 5409 | 699 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 5L08 | 8300 | 2023-02-21 | 2016-07-26 | 4.6 | 3.95 | — | 4.3 | 0.011 | 1.03 | 0.0 | 0.05 | 11.66 | 0.00 | 2.041 | 6.99 | 0.00 | 3.0 | 96.8 | 0.2 | -0.41 | 0.34 | 0.71 | — | 4.5 | 0.006 | 1.23 | 0.0 | 0.06 | 14.56 | 0.01 | 1.854 | 41.71 | 0.00 | 6.7 | 93.3 | 0.0 | -3.29 | 3.82 | 0.26 | 0.71 | — | 13617 | 1629 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N7S | 0362 | 2023-02-20 | 2018-11-28 | 4.6 | 4.47 | — | 4.4 | 0.008 | 1.20 | 0.0 | 0.07 | 14.87 | 0.01 | 1.812 | 8.33 | 1.04 | 12.5 | 87.5 | 0.0 | -5.07 | 0.69 | 0.54 | — | 4.3 | 0.003 | 0.71 | 0.0 | 0.04 | 14.71 | 0.00 | 1.879 | 15.87 | 0.00 | 5.3 | 94.7 | 0.0 | -2.15 | 1.90 | 0.71 | 0.59 | — | 12783 | 1607 | 11 | 13 | 8 | 0 | 0 | logfile |
✔ | 6ZY4 | 11549 | 2023-02-21 | 2020-07-30 | 4.1 | 4.37 | — | 4.1 | 0.003 | 0.80 | 0.0 | 0.05 | 13.50 | 0.01 | 2.314 | 3.85 | 0.00 | 4.9 | 95.1 | 0.0 | -5.91 | 0.73 | 0.74 | — | 4.1 | 0.003 | 0.77 | 0.0 | 0.04 | 12.71 | 0.00 | 1.965 | 11.98 | 0.00 | 5.4 | 94.6 | 0.0 | -1.71 | 2.49 | 0.76 | 0.79 | — | 14902 | 1978 | 14 | 0 | 4 | 0 | 0 | logfile |
✔ | 7RZQ | 24774 | 2023-02-16 | 2021-08-27 | 2.09 | 2.26 | — | 2.7 | 0.006 | 0.40 | 0.0 | 0.03 | 14.23 | 0.00 | 2.339 | 4.69 | 0.00 | 1.9 | 98.1 | 0.0 | 2.15 | 0.78 | 0.79 | 1.56 | 2.0 | 0.003 | 0.31 | 0.0 | 0.03 | 15.07 | 0.00 | 2.343 | 5.71 | 0.00 | 0.0 | 100.0 | 0.0 | 5.84 | 0.30 | 0.82 | 0.82 | 2.01 | 2421 | 322 | 6 | 0 | 0 | 0 | 0 | logfile |