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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8CYV | 27085 | 2023-12-08 | 2022-05-24 | 3.5 | 3.17 | 3.47 | 3.7 | 0.003 | 0.61 | 0.0 | 0.05 | 10.01 | 0.00 | 2.423 | 5.36 | 0.00 | 5.9 | 94.1 | 0.0 | -4.11 | 0.58 | 0.72 | 2.74 | 3.4 | 0.004 | 0.75 | 0.0 | 0.05 | 16.08 | 0.00 | 2.184 | 9.50 | 2.17 | 7.0 | 92.4 | 0.6 | -4.20 | 1.35 | 0.59 | 0.75 | 2.25 | 5964 | 864 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 5XLP | 6731 | 2023-12-09 | 2017-05-11 | 4.2 | 4.23 | — | 4.2 | 0.009 | 1.36 | 0.0 | 0.06 | 15.79 | 0.01 | 2.194 | 12.48 | 0.57 | 18.2 | 81.4 | 0.5 | -5.53 | 0.62 | 0.58 | — | 4.1 | 0.005 | 1.00 | 0.0 | 0.05 | 17.12 | 0.01 | 1.979 | 25.70 | 0.00 | 20.2 | 79.5 | 0.3 | -4.19 | 2.42 | 0.66 | 0.65 | — | 9952 | 1343 | 6 | 24 | 0 | 0 | 0 | logfile |
✔ | 7QiG | 13989 | 2023-12-07 | 2021-12-14 | 2.7 | 2.81 | — | 2.8 | 0.005 | 0.69 | 0.0 | 0.05 | 14.67 | 0.01 | 2.138 | 2.72 | 0.00 | 8.7 | 91.3 | 0.0 | -4.18 | 0.37 | 0.86 | 6.92 | 2.8 | 0.003 | 0.64 | 0.0 | 0.05 | 17.73 | 0.00 | 2.134 | 6.24 | 0.87 | 10.0 | 90.0 | 0.0 | -4.19 | 0.62 | 0.38 | 0.87 | 5.69 | 3213 | 396 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6L2T | 0814 | 2023-12-10 | 2019-10-06 | 4.1 | 4.14 | — | 4.2 | 0.003 | 0.61 | 0.0 | 0.05 | 12.33 | 0.00 | 2.222 | 5.89 | 0.15 | 13.8 | 86.0 | 0.2 | -5.72 | 0.61 | 0.76 | — | 4.2 | 0.005 | 0.77 | 0.0 | 0.05 | 12.54 | 0.01 | 2.083 | 8.68 | 0.00 | 17.6 | 82.3 | 0.1 | -4.18 | 0.52 | 0.61 | 0.77 | — | 13604 | 1889 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YNL | 33965 | 2023-12-07 | 2022-07-31 | 2.6 | 2.16 | 2.41 | 3.2 | 0.009 | 2.40 | 0.0 | 0.06 | 16.15 | 0.05 | 2.128 | 26.40 | 0.00 | 8.9 | 91.1 | 0.0 | -6.11 | 0.27 | 0.35 | 2.03 | 3.4 | 0.004 | 0.96 | 0.0 | 0.05 | 18.12 | 0.00 | 2.218 | 11.58 | 8.44 | 9.8 | 90.2 | 0.0 | -4.15 | 3.90 | 0.39 | 0.64 | 2.49 | 4080 | 464 | 16 | 0 | 16 | 0 | 0 | logfile |
✔ | 7X0T | 32924 | 2023-12-09 | 2022-02-22 | 3.3 | 3.58 | — | 3.6 | 0.010 | 1.31 | 3.0 | 0.09 | 15.65 | 0.01 | 2.217 | 7.12 | 1.87 | 9.9 | 89.8 | 0.2 | -5.80 | 0.64 | 0.81 | 2.49 | 3.6 | 0.003 | 0.68 | 0.0 | 0.04 | 16.44 | 0.00 | 2.130 | 7.95 | 0.19 | 7.1 | 92.9 | 0.0 | -4.15 | 0.94 | 0.61 | 0.83 | 1.82 | 10189 | 1266 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7P6E | 13227 | 2023-12-08 | 2021-07-15 | 3.4 | 3.40 | 3.47 | 4.1 | 0.009 | 0.96 | 0.0 | 0.06 | 8.26 | 0.01 | 2.358 | 3.99 | 0.00 | 5.9 | 94.1 | 0.0 | -4.80 | 0.54 | 0.80 | 4.38 | 4.1 | 0.005 | 0.72 | 0.0 | 0.05 | 13.11 | 0.00 | 2.134 | 11.17 | 0.21 | 8.3 | 91.7 | 0.0 | -4.15 | 2.70 | 0.51 | 0.79 | 4.06 | 8090 | 1050 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7U13 | 26276 | 2023-12-07 | 2022-02-19 | 2.9 | 3.67 | — | 4.2 | 0.018 | 2.43 | 0.0 | 0.07 | 19.23 | 0.01 | 2.120 | 29.95 | 6.30 | 11.3 | 88.0 | 0.8 | -3.06 | 0.30 | 0.47 | 1.37 | 4.2 | 0.005 | 1.06 | 0.0 | 0.06 | 17.56 | 0.00 | 2.164 | 17.39 | 4.46 | 12.5 | 87.5 | 0.0 | -4.15 | 6.83 | 0.33 | 0.57 | 1.53 | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 8SBD | 40305 | 2023-12-08 | 2023-04-03 | 3.2 | 3.26 | 4.77 | 3.7 | 0.003 | 0.73 | 0.0 | 0.04 | 12.98 | 0.00 | 2.203 | 18.83 | 5.97 | 6.2 | 93.8 | 0.0 | -4.19 | 0.70 | 0.71 | 2.96 | 3.7 | 0.004 | 0.69 | 0.0 | 0.05 | 15.41 | 0.00 | 1.886 | 27.00 | 0.37 | 11.3 | 88.7 | 0.0 | -4.14 | 1.07 | 0.73 | 0.75 | 3.21 | 8864 | 584 | 32 | 0 | 0 | 0 | 4280 | logfile |
✔ | 6RT0 | 4994 | 2023-12-07 | 2019-05-22 | 3.1 | 3.18 | — | 3.1 | 0.006 | 0.97 | 0.0 | 0.06 | 14.23 | 0.00 | 2.415 | 2.11 | 1.06 | 11.5 | 88.5 | 0.0 | -3.76 | 0.71 | 0.84 | 6.51 | 3.1 | 0.009 | 0.89 | 0.0 | 0.06 | 16.41 | 0.00 | 2.255 | 5.41 | 0.43 | 17.4 | 82.6 | 0.0 | -4.13 | 0.82 | 0.72 | 0.86 | 5.76 | 4925 | 735 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TNF | 10531 | 2023-12-09 | 2019-12-07 | 3.8 | 2.90 | 3.67 | 2.7 | 0.032 | 1.64 | 0.0 | 0.32 | 18.93 | 0.01 | 2.236 | 8.40 | 0.00 | 17.8 | 81.5 | 0.7 | -5.32 | 0.60 | 0.56 | — | 2.6 | 0.006 | 1.19 | 0.0 | 0.10 | 15.66 | 0.01 | 2.088 | 17.70 | 0.00 | 21.3 | 78.6 | 0.1 | -4.12 | 0.55 | 0.65 | 0.64 | — | 9559 | 2206 | 5 | 0 | 66 | 0 | 0 | logfile |
✔ | 7M64 | 23688 | 2023-12-07 | 2021-03-25 | 4.0 | 4.02 | — | 4.3 | 0.073 | 1.15 | 0.0 | 0.07 | 10.07 | 0.00 | 2.451 | 19.77 | 0.00 | 8.7 | 91.3 | 0.0 | -3.84 | 0.52 | 0.75 | — | 4.3 | 0.004 | 0.96 | 0.0 | 0.04 | 11.67 | 0.00 | 2.231 | 11.30 | 0.48 | 5.7 | 94.3 | 0.0 | -4.10 | 1.15 | 0.52 | 0.74 | — | 1850 | 250 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 7NSL | 12570 | 2023-12-08 | 2021-03-08 | 3.1 | 3.25 | 2.92 | 3.2 | 0.012 | 1.84 | 0.0 | 0.08 | 14.48 | 0.01 | 2.367 | 4.69 | 0.00 | 3.7 | 96.3 | 0.0 | -5.51 | 0.54 | 0.77 | 3.94 | 3.2 | 0.003 | 0.65 | 0.0 | 0.04 | 17.26 | 0.00 | 2.113 | 6.25 | 0.43 | 5.5 | 94.5 | 0.0 | -4.10 | 0.96 | 0.55 | 0.81 | 2.99 | 8323 | 595 | 7 | 0 | 0 | 0 | 4053 | logfile |
✔ | 7TMC | 25995 | 2023-12-07 | 2022-01-19 | 3.25 | 3.24 | 2.95 | 4.2 | 0.005 | 0.72 | 0.0 | 0.07 | 18.02 | 0.01 | 2.152 | 13.78 | 0.00 | 9.5 | 90.5 | 0.0 | -4.08 | 0.21 | 0.31 | -0.39 | 3.5 | 0.004 | 0.86 | 0.0 | 0.07 | 15.93 | 0.01 | 2.160 | 18.47 | 0.26 | 11.5 | 88.5 | 0.0 | -4.08 | 1.96 | 0.35 | 0.75 | 2.88 | 3426 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 6RTB | 4996 | 2023-12-07 | 2019-05-22 | 3.46 | 3.57 | — | 3.5 | 0.009 | 1.23 | 0.0 | 0.07 | 15.08 | 0.01 | 2.122 | 6.27 | 2.61 | 18.9 | 80.9 | 0.2 | -4.64 | 0.62 | 0.79 | 4.22 | 3.5 | 0.004 | 0.76 | 0.0 | 0.05 | 15.59 | 0.00 | 2.167 | 12.95 | 1.53 | 17.5 | 82.5 | 0.0 | -4.08 | 0.60 | 0.62 | 0.80 | 3.79 | 4681 | 699 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DJP | 7939 | 2023-12-08 | 2018-05-25 | 4.8 | 5.02 | — | 4.8 | 0.012 | 2.01 | 0.0 | 0.08 | 6.54 | 0.01 | 2.368 | 0.45 | 0.00 | 4.6 | 95.4 | 0.0 | -0.74 | 0.76 | 0.65 | — | 4.8 | 0.007 | 1.20 | 0.0 | 0.05 | 10.26 | 0.01 | 2.155 | 17.20 | 0.00 | 22.3 | 77.7 | 0.1 | -4.08 | 1.18 | 0.82 | 0.76 | — | 7307 | 1393 | 16 | 0 | 23 | 0 | 0 | logfile |
✔ | 6L1T | 0801 | 2023-12-08 | 2019-09-30 | 3.22 | 3.42 | — | 3.4 | 0.011 | 0.92 | 0.0 | 0.06 | 14.06 | 0.00 | 2.296 | 12.89 | 0.00 | 12.6 | 87.4 | 0.0 | -5.37 | 0.49 | 0.84 | 2.71 | 3.4 | 0.005 | 0.73 | 0.0 | 0.05 | 16.05 | 0.00 | 2.215 | 11.78 | 0.44 | 10.0 | 90.0 | 0.0 | -4.06 | 1.41 | 0.49 | 0.86 | 3.50 | 7010 | 1000 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KVE | 23048 | 2023-12-09 | 2020-11-27 | 3.3 | 3.69 | 3.38 | 3.6 | 0.005 | 0.82 | 2.0 | 0.05 | 14.67 | 0.00 | 2.204 | 17.32 | 0.57 | 18.2 | 81.4 | 0.4 | -5.88 | 0.75 | 0.73 | 2.61 | 3.6 | 0.003 | 0.69 | 0.0 | 0.05 | 16.52 | 0.01 | 2.162 | 12.03 | 0.08 | 12.6 | 87.4 | 0.0 | -4.06 | 1.20 | 0.75 | 0.73 | 2.24 | 11142 | 1374 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5XLo | 6729 | 2023-12-10 | 2017-05-11 | 3.8 | 3.91 | — | 3.9 | 0.009 | 1.37 | 0.0 | 0.06 | 15.08 | 0.01 | 2.050 | 13.55 | 0.29 | 17.3 | 81.9 | 0.8 | -6.02 | 0.58 | 0.64 | 0.55 | 3.9 | 0.004 | 0.92 | 0.0 | 0.04 | 18.17 | 0.01 | 2.072 | 21.53 | 0.81 | 17.0 | 82.5 | 0.5 | -4.05 | 1.61 | 0.62 | 0.66 | 0.94 | 15413 | 2073 | 9 | 38 | 0 | 0 | 0 | logfile |
✔ | 6YEG | 10792 | 2023-12-10 | 2020-03-24 | 4.0 | 3.79 | 4.25 | 3.5 | 0.006 | 1.08 | 0.0 | 0.05 | 12.04 | 0.01 | 2.293 | 11.31 | 0.85 | 15.4 | 84.4 | 0.2 | -5.46 | 0.46 | 0.58 | — | 3.6 | 0.003 | 0.69 | 0.0 | 0.04 | 14.15 | 0.00 | 2.124 | 15.10 | 0.06 | 10.8 | 89.2 | 0.0 | -4.03 | 1.29 | 0.55 | 0.68 | — | 15756 | 2064 | 12 | 0 | 0 | 0 | 0 | logfile |