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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7SP1 | 25364 | 2024-03-10 | 2021-11-02 | 3.4 | 3.65 | — | 3.9 | 0.006 | 1.29 | 0.0 | 0.07 | 19.39 | 0.01 | 2.288 | 11.67 | 0.00 | 2.9 | 97.1 | 0.0 | -2.42 | 0.41 | 0.72 | 4.86 | 4.1 | 0.007 | 0.95 | 0.0 | 0.06 | 19.98 | 0.01 | 2.152 | 25.13 | 3.84 | 15.9 | 84.1 | 0.0 | -4.09 | 1.67 | 0.40 | 0.76 | 4.40 | 4343 | 540 | 17 | 20 | 0 | 0 | 0 | logfile |
✔ | 5XLP | 6731 | 2024-03-14 | 2017-05-11 | 4.2 | 4.23 | — | 4.2 | 0.009 | 1.36 | 0.0 | 0.06 | 16.05 | 0.01 | 2.194 | 12.48 | 0.57 | 18.2 | 81.4 | 0.5 | -5.53 | 0.62 | 0.58 | — | 4.2 | 0.004 | 0.93 | 0.0 | 0.04 | 17.17 | 0.01 | 2.092 | 19.09 | 0.11 | 15.6 | 84.1 | 0.3 | -4.04 | 2.39 | 0.65 | 0.64 | — | 9952 | 1343 | 6 | 24 | 0 | 0 | 0 | logfile |
✔ | 6DJP | 7939 | 2024-03-11 | 2018-05-25 | 4.8 | 5.02 | — | 4.8 | 0.012 | 2.01 | 0.0 | 0.08 | 11.31 | 0.01 | 2.368 | 0.45 | 0.00 | 4.6 | 95.4 | 0.0 | -0.74 | 0.76 | 0.65 | — | 4.8 | 0.007 | 1.19 | 0.0 | 0.05 | 10.55 | 0.01 | 2.168 | 17.65 | 0.00 | 23.0 | 76.9 | 0.1 | -4.03 | 1.19 | 0.82 | 0.76 | — | 7307 | 1393 | 16 | 0 | 23 | 0 | 0 | logfile |
✔ | 8A7T | 15225 | 2024-03-10 | 2022-06-21 | 3.0 | 2.93 | 3.07 | 3.2 | 0.003 | 0.46 | 0.0 | 0.04 | 8.48 | 0.00 | 2.302 | 5.04 | 0.00 | 2.8 | 97.2 | 0.0 | -4.48 | 0.39 | 0.85 | 4.72 | 3.2 | 0.005 | 0.67 | 0.0 | 0.04 | 15.85 | 0.00 | 2.226 | 8.96 | 4.29 | 3.5 | 96.5 | 0.0 | -4.03 | 1.15 | 0.43 | 0.89 | 4.90 | 3702 | 444 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LNi | 0931 | 2024-03-10 | 2019-12-30 | 2.702 | 2.94 | — | 2.9 | 0.004 | 0.55 | 0.0 | 0.04 | 14.81 | 0.00 | 2.200 | 10.98 | 0.00 | 12.6 | 87.4 | 0.0 | -6.05 | 0.48 | 0.82 | 5.95 | 2.9 | 0.004 | 0.63 | 0.0 | 0.05 | 19.56 | 0.00 | 2.233 | 9.41 | 2.28 | 9.8 | 90.2 | 0.0 | -4.02 | 1.14 | 0.55 | 0.88 | 5.48 | 4920 | 600 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TD6 | 25824 | 2024-03-10 | 2021-12-30 | 3.0 | 3.41 | 3.09 | 3.4 | 0.002 | 0.57 | 0.0 | 0.05 | 16.47 | 0.00 | 2.449 | 7.94 | 0.00 | 0.0 | 100.0 | 0.0 | -3.11 | 0.42 | 0.76 | 2.95 | 3.4 | 0.006 | 0.84 | 0.0 | 0.05 | 18.31 | 0.00 | 2.252 | 12.18 | 4.03 | 8.5 | 91.5 | 0.0 | -4.02 | 2.29 | 0.43 | 0.77 | 4.22 | 5575 | 690 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 5XLo | 6729 | 2024-03-16 | 2017-05-11 | 3.8 | 3.91 | — | 3.9 | 0.009 | 1.37 | 0.0 | 0.06 | 15.31 | 0.01 | 2.050 | 13.55 | 0.29 | 17.3 | 81.9 | 0.8 | -6.02 | 0.58 | 0.64 | 0.55 | 3.9 | 0.003 | 0.88 | 0.0 | 0.04 | 18.43 | 0.01 | 2.050 | 20.71 | 3.46 | 15.9 | 83.7 | 0.4 | -4.02 | 1.62 | 0.60 | 0.66 | 0.51 | 15413 | 2073 | 9 | 38 | 0 | 0 | 0 | logfile |
✔ | 7M64 | 23688 | 2024-03-10 | 2021-03-25 | 4.0 | 4.02 | — | 4.3 | 0.008 | 1.15 | 0.0 | 0.07 | 10.07 | 0.00 | 2.451 | 19.77 | 0.00 | 8.7 | 91.3 | 0.0 | -3.84 | 0.52 | 0.75 | — | 4.3 | 0.004 | 0.89 | 0.0 | 0.04 | 11.40 | 0.00 | 2.234 | 7.06 | 0.48 | 5.7 | 94.3 | 0.0 | -4.00 | 1.13 | 0.51 | 0.74 | — | 1850 | 250 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 7KVE | 23048 | 2024-03-15 | 2020-11-27 | 3.3 | 3.69 | 3.38 | 3.6 | 0.005 | 0.82 | 2.0 | 0.05 | 14.67 | 0.00 | 2.204 | 17.32 | 0.57 | 18.2 | 81.4 | 0.4 | -5.88 | 0.75 | 0.73 | 2.61 | 3.6 | 0.003 | 0.68 | 0.0 | 0.04 | 16.45 | 0.00 | 2.169 | 12.44 | 3.18 | 13.0 | 87.0 | 0.0 | -4.00 | 1.20 | 0.75 | 0.74 | 2.08 | 11142 | 1374 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6H3i | 0133 | 2024-03-18 | 2018-07-18 | 3.5 | 3.59 | — | 3.5 | 0.009 | 0.92 | 0.0 | 0.05 | 10.08 | 0.01 | 2.012 | 39.59 | 0.40 | 21.4 | 78.4 | 0.2 | -5.64 | 0.78 | 0.86 | 4.47 | 3.5 | 0.004 | 0.61 | 0.0 | 0.04 | 13.12 | 0.00 | 2.021 | 50.15 | 1.95 | 17.5 | 82.4 | 0.1 | -3.99 | 2.52 | 0.78 | 0.87 | 3.27 | 20599 | 2597 | 3 | 0 | 0 | 0 | 53 | logfile |
✔ | 8oQ4 | 17104 | 2024-03-15 | 2023-04-11 | 2.6 | 2.33 | 2.58 | 2.5 | 0.015 | 2.02 | 0.0 | 0.11 | 15.01 | 0.01 | 2.528 | 2.33 | 0.00 | 1.0 | 99.0 | 0.0 | -5.03 | 0.81 | 0.78 | 1.89 | 2.5 | 0.006 | 0.86 | 0.0 | 0.05 | 19.74 | 0.00 | 2.147 | 13.56 | 3.14 | 1.8 | 98.2 | 0.0 | -3.99 | 0.76 | 0.88 | 0.89 | 3.60 | 13056 | 1632 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7o7S | 12755 | 2024-03-24 | 2021-04-13 | 4.3 | 4.69 | — | 4.4 | 0.009 | 1.28 | 7.0 | 0.07 | 17.31 | 0.02 | 1.857 | 21.65 | 1.09 | 20.1 | 79.2 | 0.7 | -5.96 | 0.75 | 0.58 | — | 4.4 | 0.004 | 0.90 | 0.0 | 0.05 | 14.92 | 0.01 | 2.066 | 25.76 | 0.02 | 13.7 | 86.1 | 0.1 | -3.99 | 1.38 | 0.76 | 0.61 | — | 41466 | 5236 | 17 | 0 | 44 | 0 | 0 | logfile |
✔ | 6YEG | 10792 | 2024-03-16 | 2020-03-24 | 4.0 | 3.79 | 4.25 | 3.5 | 0.006 | 1.08 | 0.0 | 0.05 | 12.04 | 0.01 | 2.293 | 11.31 | 0.85 | 15.4 | 84.4 | 0.2 | -5.46 | 0.46 | 0.58 | — | 3.6 | 0.003 | 0.70 | 0.0 | 0.04 | 14.17 | 0.00 | 2.118 | 16.20 | 1.46 | 12.8 | 87.2 | 0.0 | -3.98 | 1.28 | 0.55 | 0.68 | — | 15756 | 2064 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oSJ | 20183 | 2024-03-10 | 2019-05-01 | 2.8 | 2.81 | — | 2.8 | 0.011 | 1.13 | 0.0 | 0.07 | 13.69 | 0.00 | 2.227 | 10.71 | 0.00 | 18.6 | 79.7 | 1.7 | -4.71 | 0.50 | 0.79 | 4.82 | 2.8 | 0.006 | 0.91 | 0.0 | 0.06 | 16.71 | 0.00 | 2.193 | 9.79 | 8.60 | 19.8 | 80.2 | 0.0 | -3.98 | 0.44 | 0.51 | 0.80 | 4.01 | 4210 | 610 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6EU1 | 3956 | 2024-03-24 | 2017-10-27 | 3.4 | 3.40 | — | 6.6 | 0.005 | 1.14 | 0.0 | 0.06 | 13.02 | 0.01 | 1.732 | 6.52 | 0.50 | 16.1 | 83.5 | 0.4 | -5.70 | 0.20 | 0.01 | 0.29 | 3.4 | 0.009 | 1.12 | 3.0 | 0.06 | 16.74 | 0.01 | 1.632 | 25.08 | 2.23 | 17.0 | 82.7 | 0.3 | -3.97 | 1.80 | 0.61 | 0.59 | 0.63 | 40547 | 5012 | 24 | 43 | 7 | 0 | 0 | logfile |
✔ | 5N6W | 3595 | 2024-03-24 | 2017-02-16 | 4.2 | 4.31 | — | 4.2 | 0.001 | 0.36 | 0.0 | 0.04 | 4.92 | 0.00 | 2.309 | 3.73 | 0.00 | 17.7 | 79.7 | 2.6 | -5.61 | 0.44 | 0.27 | — | 4.2 | 0.004 | 0.77 | 0.0 | 0.04 | 11.33 | 0.01 | 1.844 | 23.01 | 0.00 | 16.5 | 82.9 | 0.6 | -3.97 | 1.95 | 0.72 | 0.73 | — | 40752 | 2512 | 16 | 0 | 0 | 0 | 20032 | logfile |
✔ | 8CYR | 27082 | 2024-03-10 | 2022-05-24 | 4.2 | 3.54 | 3.92 | 4.0 | 0.003 | 0.62 | 0.0 | 0.05 | 8.97 | 0.00 | 2.654 | 0.08 | 2.00 | 4.4 | 95.6 | 0.0 | -2.37 | 0.46 | 0.55 | — | 4.0 | 0.007 | 0.99 | 0.0 | 0.06 | 13.11 | 0.00 | 1.994 | 19.57 | 0.00 | 11.8 | 88.2 | 0.0 | -3.97 | 2.77 | 0.54 | 0.70 | — | 5964 | 864 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ENR | 28277 | 2024-03-11 | 2022-09-30 | 3.8 | 4.03 | 4.04 | 4.3 | 0.004 | 0.80 | 0.0 | 0.05 | 14.88 | 0.00 | 2.204 | 17.13 | 0.89 | 0.7 | 99.3 | 0.0 | 1.04 | 0.43 | 0.37 | 0.94 | 4.2 | 0.007 | 1.12 | 0.0 | 0.05 | 17.60 | 0.00 | 2.048 | 35.57 | 3.72 | 15.1 | 84.9 | 0.0 | -3.97 | 2.50 | 0.51 | 0.50 | 2.45 | 6392 | 888 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GJ1 | 0009 | 2024-03-15 | 2018-05-15 | 4.7 | 4.83 | — | 4.4 | 0.010 | 1.51 | 5.0 | 0.07 | 11.65 | 0.01 | 0.341 | 23.90 | 0.72 | 18.3 | 81.3 | 0.4 | -5.15 | 0.83 | 0.71 | — | 4.4 | 0.004 | 0.91 | 0.0 | 0.05 | 12.88 | 0.01 | 2.123 | 26.89 | 0.14 | 19.3 | 80.6 | 0.1 | -3.97 | 1.15 | 0.86 | 0.78 | — | 13013 | 1638 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MLZ | 23914 | 2024-03-10 | 2021-04-29 | 3.71 | 4.27 | 3.83 | 3.9 | 0.004 | 0.82 | 0.0 | 0.05 | 14.73 | 0.01 | 2.150 | 18.13 | 0.00 | 17.4 | 82.5 | 0.2 | -4.08 | 0.80 | 0.62 | 1.39 | 3.9 | 0.003 | 0.77 | 0.0 | 0.05 | 14.58 | 0.00 | 2.104 | 15.84 | 1.68 | 15.6 | 84.3 | 0.2 | -3.96 | 0.56 | 0.81 | 0.63 | 0.97 | 4864 | 624 | 4 | 0 | 5 | 0 | 0 | logfile |