Table showing results for August 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	6X64	22069	2021-08-08	2020-05-27	3.7	4.01	—	3.7	0.008	1.34	0.0	0.05	9.32	0.01	2.584	0.78	0.00	0.0	0.0	0.0	—	0.68	0.84	—	3.7	0.009	1.23	0.0	0.05	5.41	0.00	2.105	10.80	0.00	0.0	0.0	0.0	—	2.35	0.70	0.86	—	15840	0	36	0	3168	0	0	logfile
✔	6WL8	21817	2021-08-09	2020-04-18	4.1	4.58	—	4.3	0.005	0.65	0.0	0.05	15.48	0.00	2.395	2.78	0.00	0.0	100.0	0.0	-1.08	0.73	0.86	—	4.2	0.004	0.74	0.0	0.04	14.57	0.00	2.206	13.23	0.00	0.3	99.7	0.0	3.40	1.84	0.74	0.87	—	23850	3074	106	0	0	0	0	logfile
✔	7JSV	22460	2021-08-09	2020-08-16	3.9	3.98	—	4.0	0.019	1.51	0.0	0.10	10.55	0.01	2.348	6.75	0.00	0.0	100.0	0.0	1.16	0.61	0.80	2.43	4.0	0.003	0.78	0.0	0.04	15.71	0.00	2.154	12.68	0.14	0.8	99.2	0.0	0.14	0.97	0.64	0.82	2.51	22140	2706	82	0	41	0	0	logfile
✔	6WL1	21815	2021-08-08	2020-04-17	4.0	4.02	—	4.0	0.007	0.81	0.0	0.05	7.85	0.00	2.413	3.17	0.00	0.0	100.0	0.0	-1.08	0.71	0.85	—	4.0	0.003	0.45	0.0	0.03	16.27	0.00	2.295	7.01	1.18	0.0	100.0	0.0	6.53	0.73	0.72	0.86	—	14612	1872	52	0	0	0	0	logfile
✔	6X5i	22051	2021-08-07	2020-05-26	4.3	4.27	—	4.0	0.061	3.24	210.0	0.20	32.42	0.00	2.206	29.57	0.00	0.0	0.0	0.0	—	0.70	0.70	—	4.0	0.010	1.57	210.0	0.14	27.47	0.00	1.582	67.32	0.00	0.0	0.0	0.0	—	4.38	0.66	0.73	—	4480	70	70	0	280	0	0	logfile
✘	6WKX	21812	2021-08-08	2020-04-17	4.2	4.31	—	4.2	0.006	0.59	0.0	0.04	15.11	0.00	2.298	2.52	0.00	0.0	100.0	0.0	-3.67	0.77	0.90	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	12915	1575	105	0	0	0	0	logfile
✔	6ULC	20813	2021-08-09	2019-10-07	4.6	4.75	—	4.5	0.005	0.77	0.0	0.06	14.66	0.00	2.086	5.58	0.29	0.0	100.0	0.0	-4.46	0.79	0.67	—	4.5	0.007	0.97	0.0	0.06	14.24	0.01	1.989	32.30	0.05	15.5	84.5	0.0	-3.34	0.93	0.80	0.72	—	19968	2301	46	0	142	0	0	logfile
✔	6YoV	10864	2021-08-08	2020-04-15	3.42	4.61	—	3.9	0.011	1.14	0.0	0.07	25.21	0.01	2.395	1.39	0.00	0.0	100.0	0.0	0.87	0.88	0.82	1.84	3.8	0.004	0.72	0.0	0.04	26.49	0.01	2.208	14.01	0.29	2.2	97.8	0.0	2.34	1.28	0.90	0.86	2.05	12298	898	18	262	8	0	0	logfile
✔	6WL0	21814	2021-08-08	2020-04-17	4.4	4.62	—	4.4	0.006	0.82	0.0	0.04	18.91	0.00	2.353	8.18	0.00	0.0	100.0	0.0	-5.48	0.79	0.88	—	4.4	0.004	0.96	0.0	0.04	15.02	0.00	2.153	21.40	0.00	0.9	99.1	0.0	0.24	1.68	0.79	0.86	—	11480	1476	41	0	0	0	0	logfile
✔	4UQ8	2676	2021-08-10	2014-06-21	4.95	5.05	4.64	4.9	0.012	2.07	23.0	1.38	6.71	0.01	1.032	64.12	25.00	0.0	0.0	0.0	—	0.57	0.75	—	4.9	0.013	2.51	0.0	0.41	5.90	0.00	2.133	43.68	0.00	0.0	0.0	0.0	—	2.30	0.62	0.84	—	28647	33	54	0	5686	0	0	logfile
✔	6oEH	20020	2021-08-10	2019-03-27	3.8	3.93	—	3.7	0.010	1.38	0.0	0.07	11.62	0.01	2.381	2.81	0.00	0.0	0.0	0.0	—	0.38	0.77	—	3.6	0.007	1.05	0.0	0.04	5.10	0.00	2.208	12.88	0.00	0.0	0.0	0.0	—	0.56	0.41	0.81	—	32900	0	14	0	6580	0	0	logfile
✔	6LHW	0901	2021-08-08	2019-12-10	4.84	5.29	—	4.6	0.008	1.37	1.0	0.05	5.28	0.00	1.530	14.43	0.00	0.0	0.0	0.0	—	0.64	0.56	—	4.6	0.008	1.28	0.0	0.04	6.48	0.00	2.046	43.52	0.00	0.0	0.0	0.0	—	3.27	0.81	0.80	—	7644	0	3	0	1541	0	0	logfile
✔	6oDJ	20021	2021-08-09	2019-03-26	3.5	3.75	—	3.7	0.009	1.50	0.0	0.07	11.32	0.01	2.438	2.03	0.00	0.0	0.0	0.0	—	0.81	0.81	—	3.6	0.012	1.74	0.0	0.06	7.98	0.00	2.121	11.49	0.00	0.0	0.0	0.0	—	0.66	0.82	0.83	—	25415	0	17	0	5083	0	0	logfile
✔	6TUQ	10594	2021-08-08	2020-01-08	3.9	4.52	—	4.0	0.009	1.01	0.0	0.05	11.22	0.00	2.191	8.45	3.12	0.0	100.0	0.0	-6.69	0.68	0.88	0.54	4.0	0.002	0.71	0.0	0.04	12.23	0.00	2.242	10.20	0.25	0.0	100.0	0.0	-0.58	1.70	0.69	0.88	0.87	16100	2300	50	0	0	0	0	logfile
✔	6TUP	10593	2021-08-09	2020-01-08	3.2	3.52	—	3.3	0.011	1.02	0.0	0.05	21.23	0.00	0.032	54.60	0.00	0.0	100.0	0.0	-7.04	0.49	0.47	1.19	3.6	0.032	2.22	0.0	0.21	26.94	0.01	1.011	99.23	1.25	2.0	98.0	0.0	-1.97	9.62	0.56	0.59	-0.04	22400	2300	100	300	0	0	0	logfile
✔	6oEF	20020	2021-08-11	2019-03-27	3.8	3.98	—	3.8	0.007	1.67	0.0	0.07	11.76	0.01	2.376	3.96	0.00	0.0	0.0	0.0	—	0.47	0.78	—	3.8	0.006	1.18	0.0	0.05	5.88	0.00	2.195	7.66	0.00	0.0	0.0	0.0	—	0.60	0.49	0.80	—	51240	0	14	0	10248	0	0	logfile
✔	6LHV	0900	2021-08-08	2019-12-10	4.59	4.86	—	4.4	0.010	1.38	0.0	0.05	5.37	0.00	1.654	9.63	0.00	0.0	0.0	0.0	—	0.70	0.60	—	4.4	0.009	1.33	0.0	0.04	6.44	0.00	2.065	50.71	0.00	0.0	0.0	0.0	—	3.59	0.83	0.81	—	8456	0	3	0	1707	0	0	logfile
✔	6o1o	0454	2021-08-08	2019-02-21	3.8	4.00	—	3.6	0.008	1.55	0.0	0.07	15.00	0.01	2.295	4.58	0.00	0.0	0.0	0.0	—	0.72	0.70	—	3.6	0.013	1.80	0.0	0.07	13.90	0.00	1.995	32.55	0.00	0.0	0.0	0.0	—	1.72	0.78	0.76	—	15193	0	14	66	2757	0	0	logfile
✔	6XL6	22235	2021-08-07	2020-06-28	3.0	3.41	—	3.3	0.033	0.70	0.0	0.10	20.14	0.00	2.257	5.23	0.00	0.0	100.0	0.0	-1.93	0.76	0.83	2.94	3.3	0.006	0.83	0.0	0.07	20.80	0.01	2.003	11.15	0.61	0.0	100.0	0.0	-1.41	0.27	0.75	0.84	3.03	5456	536	6	46	4	0	0	logfile
✔	6K9F	9948	2021-08-08	2019-06-15	3.7	7.50	4.15	7.2	0.002	0.45	0.0	0.03	11.87	0.00	2.356	5.29	0.00	0.0	100.0	0.0	-0.68	0.66	0.76	0.04	4.6	0.004	1.19	0.0	0.05	17.63	0.00	2.023	25.68	0.42	1.3	98.7	0.0	-0.68	3.89	0.67	0.84	-0.06	8484	1044	12	0	0	0	0	logfile

• Page 1 of 276
• next →