The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7SAM | 24952 | 2023-02-17 | 2021-09-22 | 4.3 | 6.95 | 4.38 | 4.2 | 0.001 | 0.39 | 0.0 | 0.02 | 13.28 | 0.00 | 1.952 | 2.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.84 | 0.51 | — | 4.3 | 0.007 | 0.88 | 0.0 | 0.04 | 22.84 | 0.01 | 1.820 | 82.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 5.78 | 0.96 | 0.87 | — | 5399 | 0 | 1 | 169 | 0 | 0 | 1802 | logfile |
✔ | 7TD6 | 25824 | 2023-02-17 | 2021-12-30 | 3.0 | 3.41 | 3.09 | 3.4 | 0.002 | 0.57 | 0.0 | 0.05 | 16.47 | 0.00 | 2.449 | 7.94 | 0.00 | 0.0 | 100.0 | 0.0 | -3.11 | 0.42 | 0.76 | 2.95 | 3.4 | 0.005 | 0.89 | 0.0 | 0.05 | 18.65 | 0.00 | 2.234 | 13.38 | 3.53 | 9.9 | 90.1 | 0.0 | -4.01 | 1.10 | 0.43 | 0.78 | 3.81 | 5575 | 690 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZFW | 14704 | 2023-02-20 | 2022-04-01 | 3.8 | 4.62 | 3.46 | 3.0 | 0.006 | 0.83 | 0.0 | 0.05 | 17.92 | 0.03 | 2.266 | 2.77 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.32 | 0.81 | — | 3.0 | 0.009 | 0.90 | 0.0 | 0.04 | 20.26 | 0.01 | 1.952 | 38.01 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.55 | 0.33 | 0.85 | — | 13188 | 0 | 1 | 615 | 0 | 0 | 0 | logfile |
✔ | 6TUQ | 10594 | 2023-02-21 | 2020-01-08 | 3.9 | 4.52 | — | 4.0 | 0.009 | 1.01 | 0.0 | 0.05 | 11.22 | 0.00 | 2.191 | 8.45 | 3.12 | 0.0 | 100.0 | 0.0 | -6.69 | 0.68 | 0.88 | 0.54 | 4.0 | 0.003 | 0.70 | 0.0 | 0.04 | 12.36 | 0.00 | 2.317 | 11.19 | 0.12 | 0.3 | 99.7 | 0.0 | -0.42 | 1.65 | 0.69 | 0.88 | 0.65 | 16100 | 2300 | 50 | 0 | 0 | 0 | 0 | logfile |
✔ | 7URi | 26713 | 2023-02-16 | 2022-04-22 | 2.6 | 2.67 | 2.95 | 2.6 | 0.009 | 1.37 | 0.0 | 0.12 | 25.77 | 0.01 | 2.201 | 7.31 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.34 | — | 2.6 | 0.008 | 1.44 | 0.0 | 0.07 | 23.84 | 0.01 | 2.072 | 23.68 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.06 | 0.08 | 0.38 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7URM | 26714 | 2023-02-16 | 2022-04-22 | 3.0 | 3.11 | 3.56 | 2.9 | 0.009 | 1.41 | 0.0 | 0.11 | 23.67 | 0.01 | 2.440 | 0.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.14 | 0.53 | — | 3.0 | 0.007 | 1.16 | 0.0 | 0.05 | 22.87 | 0.01 | 1.983 | 29.94 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.70 | 0.15 | 0.54 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7T6E | 25714 | 2023-02-17 | 2021-12-13 | 3.1 | 3.11 | — | 3.1 | 0.129 | 5.90 | 240.0 | 0.23 | 23.20 | 0.02 | 2.041 | 30.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.60 | 0.87 | — | 3.1 | 0.122 | 5.61 | 240.0 | 0.36 | 21.80 | 0.02 | 2.082 | 31.46 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.19 | 0.66 | 0.90 | — | 3480 | 0 | 60 | 0 | 300 | 0 | 0 | logfile |
✔ | 4UQ8 | 2676 | 2023-02-26 | 2014-06-21 | 4.95 | 5.05 | 4.64 | 4.9 | 0.012 | 2.07 | 23.0 | 1.38 | 6.71 | 0.01 | 1.032 | 64.12 | 25.00 | 0.0 | 0.0 | 0.0 | — | 0.57 | 0.75 | — | 4.9 | 0.013 | 2.54 | 0.0 | 0.41 | 5.47 | 0.00 | 2.110 | 23.19 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.11 | 0.61 | 0.83 | — | 28647 | 33 | 54 | 0 | 5686 | 0 | 0 | logfile |
✔ | 7UR5 | 26705 | 2023-02-17 | 2022-04-21 | 2.6 | 2.89 | 2.82 | 2.9 | 0.008 | 1.48 | 0.0 | 0.11 | 25.09 | 0.01 | 2.204 | 2.44 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.58 | — | 2.9 | 0.005 | 0.83 | 0.0 | 0.04 | 20.54 | 0.01 | 2.027 | 14.87 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.86 | 0.08 | 0.65 | — | 5709 | 0 | 3 | 270 | 0 | 0 | 0 | logfile |
✔ | 6WKX | 21812 | 2023-02-20 | 2020-04-17 | 4.2 | 4.31 | — | 4.2 | 0.006 | 0.59 | 0.0 | 0.04 | 15.11 | 0.00 | 2.298 | 2.52 | 0.00 | 0.0 | 100.0 | 0.0 | -3.67 | 0.77 | 0.90 | — | 4.2 | 0.003 | 0.66 | 0.0 | 0.04 | 16.29 | 0.00 | 2.237 | 9.35 | 0.00 | 0.1 | 99.9 | 0.0 | 4.37 | 1.00 | 0.77 | 0.89 | — | 12915 | 1575 | 105 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LQi | 23487 | 2023-02-18 | 2021-02-13 | 3.5 | 3.92 | — | 3.9 | 0.016 | 1.40 | 0.0 | 0.03 | 20.42 | 0.00 | 2.242 | 22.86 | 5.00 | 0.0 | 100.0 | 0.0 | -3.42 | 0.62 | 0.78 | 4.80 | 3.9 | 0.051 | 2.84 | 5.0 | 0.14 | 22.95 | 0.01 | 1.918 | 120.77 | 3.33 | 46.5 | 53.5 | 0.0 | -7.05 | 1.54 | 0.65 | 0.83 | 2.52 | 8400 | 800 | 100 | 0 | 0 | 0 | 0 | logfile |
✔ | 6o1o | 0454 | 2023-02-21 | 2019-02-21 | 3.8 | 4.00 | — | 3.6 | 0.008 | 1.55 | 0.0 | 0.07 | 15.00 | 0.01 | 2.295 | 4.58 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.72 | 0.70 | — | 3.6 | 0.013 | 1.77 | 0.0 | 0.07 | 13.79 | 0.00 | 1.993 | 31.58 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.70 | 0.78 | 0.76 | — | 15193 | 0 | 14 | 66 | 2757 | 0 | 0 | logfile |
✔ | 7Q5A | 13830 | 2023-02-23 | 2021-11-03 | 2.46 | 2.69 | — | 2.6 | 0.012 | 1.10 | 1600.0 | 0.06 | 9.54 | 0.00 | 2.247 | 3.06 | 0.00 | 0.0 | 100.0 | 0.0 | 0.99 | 0.66 | 0.84 | 6.72 | 2.6 | 0.055 | 3.99 | 1601.0 | 0.21 | 16.66 | 0.02 | 1.952 | 25.67 | 2.65 | 0.0 | 100.0 | 0.0 | 0.76 | 1.64 | 0.67 | 0.86 | 6.20 | 61600 | 5600 | 800 | 0 | 1600 | 0 | 0 | logfile |
✔ | 6WL0 | 21814 | 2023-02-20 | 2020-04-17 | 4.4 | 4.62 | — | 4.4 | 0.006 | 0.82 | 0.0 | 0.04 | 18.91 | 0.00 | 2.353 | 8.18 | 0.00 | 0.0 | 100.0 | 0.0 | -5.48 | 0.79 | 0.88 | — | 4.4 | 0.005 | 0.96 | 0.0 | 0.04 | 14.65 | 0.00 | 2.062 | 21.77 | 0.18 | 0.1 | 99.9 | 0.0 | 0.14 | 1.67 | 0.79 | 0.86 | — | 11480 | 1476 | 41 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PTL | 13630 | 2023-02-24 | 2021-09-27 | 4.9 | 10.06 | 4.95 | — | 0.005 | 1.01 | 0.0 | 0.06 | 16.11 | 0.01 | 2.401 | 0.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.79 | — | — | 0.007 | 0.90 | 0.0 | 0.04 | 21.29 | 0.01 | 1.737 | 86.57 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.52 | 0.91 | 0.92 | — | 23080 | 0 | 1 | 720 | 0 | 0 | 7743 | logfile |
✔ | 7UVT | 26816 | 2023-02-20 | 2022-05-02 | 3.9 | 4.17 | 4.00 | 4.1 | 0.001 | 0.41 | 0.0 | 0.02 | 16.13 | 0.00 | 1.897 | 6.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.76 | 0.74 | — | 4.1 | 0.006 | 0.70 | 0.0 | 0.04 | 17.94 | 0.01 | 1.892 | 21.35 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.48 | 0.77 | 0.76 | — | 12409 | 0 | 1 | 386 | 0 | 0 | 4149 | logfile |
✔ | 6XL6 | 22235 | 2023-02-17 | 2020-06-28 | 3.0 | 3.41 | — | 3.3 | 0.005 | 0.68 | 0.0 | 0.05 | 20.19 | 0.00 | 2.257 | 5.23 | 0.00 | 0.0 | 100.0 | 0.0 | -1.93 | 0.76 | 0.83 | 2.94 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 21.18 | 0.00 | 2.275 | 6.47 | 2.65 | 1.3 | 98.7 | 0.0 | 0.64 | 1.38 | 0.74 | 0.83 | 2.39 | 5456 | 536 | 6 | 46 | 4 | 0 | 0 | logfile |
✔ | 7JSV | 22460 | 2023-02-24 | 2020-08-16 | 3.9 | 3.98 | — | 4.0 | 0.020 | 2.10 | 0.0 | 0.10 | 13.46 | 0.01 | 2.348 | 6.75 | 0.00 | 0.0 | 100.0 | 0.0 | 1.16 | 0.61 | 0.80 | 2.43 | 4.0 | 0.003 | 0.79 | 0.0 | 0.04 | 16.05 | 0.00 | 2.148 | 12.36 | 0.19 | 1.0 | 99.0 | 0.0 | -0.77 | 0.91 | 0.64 | 0.83 | 2.60 | 22140 | 2706 | 82 | 0 | 41 | 0 | 0 | logfile |
✔ | 6X64 | 22069 | 2023-02-21 | 2020-05-27 | 3.7 | 4.01 | — | 3.7 | 0.008 | 1.34 | 0.0 | 0.05 | 9.32 | 0.01 | 2.584 | 0.78 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.68 | 0.84 | — | 3.7 | 0.009 | 1.23 | 0.0 | 0.05 | 5.42 | 0.00 | 2.111 | 10.35 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.35 | 0.69 | 0.86 | — | 15840 | 0 | 36 | 0 | 3168 | 0 | 0 | logfile |
✔ | 6oDJ | 20021 | 2023-02-25 | 2019-03-26 | 3.5 | 3.75 | — | 3.7 | 0.009 | 1.50 | 0.0 | 0.07 | 11.32 | 0.01 | 2.438 | 2.03 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.81 | 0.81 | — | 3.7 | 0.012 | 1.73 | 0.0 | 0.06 | 7.96 | 0.00 | 2.090 | 10.56 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.60 | 0.82 | 0.83 | — | 25415 | 0 | 17 | 0 | 5083 | 0 | 0 | logfile |