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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6oEH | 20020 | 2023-08-22 | 2019-03-27 | 3.8 | 3.93 | — | 3.7 | 0.010 | 1.38 | 0.0 | 0.07 | 11.62 | 0.01 | 2.381 | 2.81 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.38 | 0.77 | — | 3.7 | 0.007 | 1.05 | 0.0 | 0.04 | 5.09 | 0.00 | 2.203 | 12.28 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.52 | 0.40 | 0.80 | — | 32900 | 0 | 14 | 0 | 6580 | 0 | 0 | logfile |
✔ | 7XD5 | 33136 | 2023-08-10 | 2022-03-26 | 2.84 | 3.32 | 2.81 | 3.1 | 0.003 | 0.58 | 0.0 | 0.03 | 13.91 | 0.00 | 1.864 | 0.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.86 | — | 3.1 | 0.004 | 0.64 | 0.0 | 0.04 | 15.36 | 0.00 | 1.949 | 6.26 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.38 | 0.89 | 0.90 | — | 8714 | 0 | 3 | 406 | 30 | 0 | 0 | logfile |
✔ | 7YGA | 33813 | 2023-08-10 | 2022-07-11 | 2.35 | 3.08 | 2.44 | 2.8 | 0.008 | 0.62 | 0.0 | 0.04 | 15.23 | 0.01 | 1.779 | 10.87 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.89 | 0.87 | — | 2.8 | 0.007 | 0.60 | 0.0 | 0.04 | 15.25 | 0.00 | 1.826 | 12.63 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.16 | 0.89 | 0.88 | — | 8692 | 0 | 3 | 407 | 8 | 0 | 0 | logfile |
✔ | 7URi | 26713 | 2023-08-09 | 2022-04-22 | 2.6 | 2.67 | 2.95 | 2.6 | 0.009 | 1.37 | 0.0 | 0.12 | 25.77 | 0.01 | 2.201 | 7.31 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.34 | — | 2.6 | 0.008 | 1.44 | 0.0 | 0.07 | 23.84 | 0.01 | 2.072 | 23.68 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.06 | 0.08 | 0.38 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7XSN | 33428 | 2023-08-10 | 2022-05-14 | 3.01 | 4.02 | 3.04 | 3.2 | 0.013 | 1.06 | 0.0 | 0.05 | 16.67 | 0.01 | 2.252 | 5.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.84 | — | 3.2 | 0.006 | 0.61 | 0.0 | 0.03 | 16.36 | 0.00 | 2.111 | 20.82 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.30 | 0.92 | 0.87 | — | 8279 | 0 | 1 | 387 | 0 | 0 | 0 | logfile |
✔ | 7XSL | 33426 | 2023-08-12 | 2022-05-14 | 3.84 | 4.65 | 3.83 | 3.7 | 0.002 | 0.47 | 0.0 | 0.02 | 16.20 | 0.00 | 1.935 | 8.02 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.77 | — | 3.8 | 0.006 | 0.70 | 0.0 | 0.04 | 18.31 | 0.01 | 1.810 | 33.53 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.02 | 0.92 | 0.83 | — | 12467 | 0 | 1 | 388 | 0 | 0 | 4168 | logfile |
✔ | 7YG9 | 33812 | 2023-08-10 | 2022-07-11 | 2.68 | 3.47 | 2.76 | 2.8 | 0.005 | 0.51 | 0.0 | 0.03 | 15.21 | 0.00 | 1.804 | 13.88 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.86 | 0.81 | — | 2.8 | 0.006 | 0.61 | 0.0 | 0.04 | 15.60 | 0.00 | 1.866 | 18.12 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.39 | 0.92 | 0.92 | — | 8630 | 0 | 3 | 404 | 8 | 0 | 0 | logfile |
✔ | 7XSK | 33425 | 2023-08-12 | 2022-05-14 | 3.53 | 4.49 | 3.42 | 3.4 | 0.001 | 0.44 | 0.0 | 0.02 | 15.94 | 0.00 | 1.970 | 6.98 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.76 | — | 3.4 | 0.007 | 0.68 | 0.0 | 0.04 | 18.66 | 0.01 | 1.750 | 33.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.90 | 0.91 | 0.83 | — | 12467 | 0 | 1 | 388 | 0 | 0 | 4168 | logfile |
✔ | 4UQ8 | 2676 | 2023-08-20 | 2014-06-21 | 4.95 | 5.05 | 4.64 | 4.9 | 0.012 | 2.07 | 23.0 | 1.38 | 6.71 | 0.01 | 1.032 | 64.12 | 25.00 | 0.0 | 0.0 | 0.0 | — | 0.57 | 0.75 | — | 4.9 | 0.013 | 2.54 | 0.0 | 0.41 | 5.47 | 0.00 | 2.110 | 23.19 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.11 | 0.61 | 0.83 | — | 28647 | 33 | 54 | 0 | 5686 | 0 | 0 | logfile |
✔ | 7ZFW | 14704 | 2023-08-13 | 2022-04-01 | 3.8 | 4.62 | 3.46 | 3.0 | 0.006 | 0.83 | 0.0 | 0.05 | 17.92 | 0.03 | 2.266 | 2.77 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.32 | 0.81 | — | 3.0 | 0.009 | 0.90 | 0.0 | 0.04 | 20.26 | 0.01 | 1.952 | 38.01 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.55 | 0.33 | 0.85 | — | 13188 | 0 | 1 | 615 | 0 | 0 | 0 | logfile |
✔ | 7YGC | 33815 | 2023-08-10 | 2022-07-11 | 2.65 | 3.28 | 2.77 | 2.9 | 0.007 | 0.50 | 0.0 | 0.03 | 14.76 | 0.00 | 1.778 | 12.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.83 | — | 2.9 | 0.004 | 0.56 | 0.0 | 0.03 | 15.40 | 0.00 | 1.934 | 13.86 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.48 | 0.92 | 0.90 | — | 8690 | 0 | 3 | 407 | 6 | 0 | 0 | logfile |
✔ | 3J2P | 5499 | 2023-08-11 | 2012-11-30 | 3.6 | 3.28 | — | 3.4 | 0.010 | 1.92 | 0.0 | 0.12 | 17.56 | 0.02 | 2.155 | 110.32 | 20.13 | 29.7 | 46.3 | 24.1 | -7.75 | 0.42 | 0.79 | 1.08 | 3.3 | 0.003 | 0.89 | 0.0 | 0.04 | 17.84 | 0.00 | 1.911 | 69.53 | 1.47 | 18.7 | 77.9 | 3.4 | -4.26 | 0.93 | 0.38 | 0.72 | 0.85 | 9890 | 1134 | 8 | 0 | 6 | 0 | 1086 | logfile |
✔ | 7DA4 | 30622 | 2023-08-09 | 2020-10-14 | 4.24 | 3.75 | — | 4.2 | 0.010 | 1.54 | 0.0 | 0.08 | 17.16 | 0.01 | 2.245 | 79.80 | 0.00 | 50.0 | 50.0 | 0.0 | -8.65 | 0.39 | 0.66 | — | 4.3 | 0.004 | 0.94 | 0.0 | 0.04 | 10.84 | 0.00 | 2.229 | 17.17 | 0.00 | 21.7 | 78.3 | 0.0 | -5.61 | 3.07 | 0.36 | 0.60 | — | 507 | 66 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V49 | 31704 | 2023-08-09 | 2021-08-12 | 3.4 | 3.45 | — | 4.1 | 0.007 | 1.01 | 0.0 | 0.06 | 13.70 | 0.00 | 2.279 | 22.06 | 0.00 | 39.7 | 60.3 | 0.0 | -7.67 | 0.33 | 0.73 | 5.03 | 4.1 | 0.003 | 0.73 | 0.0 | 0.05 | 14.81 | 0.00 | 2.500 | 7.22 | 0.00 | 13.2 | 86.8 | 0.0 | -5.75 | 1.27 | 0.31 | 0.69 | 4.86 | 1221 | 180 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7L7H | 23212 | 2023-08-09 | 2020-12-28 | 4.0 | 2.39 | — | 4.0 | 0.008 | 1.47 | 0.0 | 0.08 | 15.10 | 0.01 | 2.199 | 13.87 | 3.53 | 36.3 | 63.7 | 0.0 | -6.00 | 0.47 | 0.60 | — | 4.0 | 0.004 | 0.94 | 0.0 | 0.06 | 16.29 | 0.00 | 2.073 | 19.50 | 1.96 | 27.7 | 72.3 | 0.0 | -4.33 | 0.93 | 0.51 | 0.65 | — | 2430 | 352 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J06 | 5185 | 2023-08-12 | 2011-04-26 | 3.3 | 2.88 | — | 3.5 | 0.011 | 2.34 | 441.0 | 0.15 | 21.08 | 0.01 | 1.607 | 79.64 | 14.71 | 21.1 | 65.4 | 13.5 | -7.24 | 0.56 | 0.80 | 1.90 | 3.2 | 0.003 | 0.88 | 0.0 | 0.04 | 20.32 | 0.01 | 2.209 | 17.76 | 0.98 | 6.9 | 91.2 | 1.8 | -3.04 | 1.28 | 0.55 | 0.78 | 2.20 | 62916 | 7595 | 98 | 147 | 0 | 0 | 0 | logfile |
✔ | 6oSM | 20186 | 2023-08-09 | 2019-05-01 | 3.4 | 3.31 | — | 3.4 | 0.012 | 1.45 | 0.0 | 0.09 | 14.06 | 0.00 | 2.183 | 28.91 | 14.88 | 34.5 | 65.5 | 0.0 | -5.34 | 0.46 | 0.74 | 2.68 | 3.4 | 0.007 | 1.25 | 0.0 | 0.07 | 15.44 | 0.00 | 2.184 | 23.54 | 1.46 | 28.1 | 71.9 | 0.0 | -5.14 | 3.39 | 0.44 | 0.75 | 3.23 | 4100 | 600 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RoW | 4975 | 2023-08-25 | 2019-05-13 | 4.5 | 4.52 | 4.16 | 4.2 | 0.016 | 1.50 | 0.0 | 0.07 | 14.46 | 0.01 | 1.848 | 49.61 | 0.00 | 30.3 | 68.7 | 1.0 | -6.95 | 0.81 | 0.74 | — | 4.2 | 0.005 | 0.73 | 0.0 | 0.04 | 13.68 | 0.01 | 1.902 | 16.83 | 0.00 | 16.7 | 83.1 | 0.2 | -3.08 | 1.48 | 0.82 | 0.74 | — | 43049 | 3129 | 7 | 0 | 0 | 0 | 20156 | logfile |
✔ | 3LoS | 5137 | 2023-08-12 | 2010-02-04 | 4.3 | 2.98 | — | 3.0 | 0.008 | 2.44 | 224.0 | 0.19 | 19.87 | 0.01 | 2.259 | 87.93 | 23.89 | 17.4 | 68.9 | 13.8 | -6.57 | 0.57 | 0.49 | — | 3.2 | 0.004 | 1.16 | 0.0 | 0.05 | 15.91 | 0.01 | 2.171 | 27.07 | 0.03 | 20.2 | 75.7 | 4.1 | -4.25 | 1.37 | 0.62 | 0.54 | — | 63712 | 8512 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KXY | 23067 | 2023-08-11 | 2020-12-05 | 4.4 | 4.55 | 4.44 | 4.5 | 0.004 | 0.82 | 0.0 | 0.05 | 15.13 | 0.01 | 2.197 | 19.28 | 7.18 | 26.0 | 69.8 | 4.2 | -5.90 | 0.63 | 0.60 | — | 4.5 | 0.003 | 0.82 | 0.0 | 0.05 | 14.45 | 0.01 | 2.088 | 21.63 | 0.10 | 15.0 | 84.9 | 0.1 | -4.55 | 1.26 | 0.63 | 0.60 | — | 9510 | 1181 | 2 | 0 | 0 | 0 | 0 | logfile |