The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6Kio | 9996 | 2023-02-21 | 2019-07-19 | 3.94 | 4.22 | — | 3.9 | 0.035 | 3.43 | 48.0 | 0.22 | 17.77 | 0.04 | 2.231 | 11.01 | 8.39 | 18.6 | 74.1 | 7.3 | -6.45 | 0.56 | 0.66 | 1.26 | 3.8 | 0.003 | 0.72 | 0.0 | 0.04 | 17.10 | 0.00 | 1.991 | 10.48 | 0.24 | 7.1 | 92.5 | 0.4 | -0.92 | 1.67 | 0.65 | 0.77 | 1.26 | 15091 | 968 | 3 | 0 | 0 | 0 | 7442 | logfile |
✔ | 5LY6 | 4118 | 2023-02-17 | 2016-09-24 | 4.5 | 4.72 | — | 4.3 | 0.006 | 1.24 | 0.0 | 0.03 | 24.28 | 0.02 | 1.526 | 94.62 | 36.32 | 20.9 | 74.2 | 4.9 | -5.32 | 0.34 | 0.59 | — | 4.4 | 0.004 | 0.81 | 0.0 | 0.04 | 14.05 | 0.00 | 2.184 | 19.06 | 0.00 | 10.7 | 88.9 | 0.4 | -2.62 | 2.58 | 0.40 | 0.76 | — | 3725 | 471 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5G2X | 3331 | 2023-02-22 | 2016-04-16 | 3.8 | 3.49 | — | 3.4 | 0.001 | 0.31 | 0.0 | 0.02 | 11.56 | 0.00 | 2.219 | 4.36 | 0.45 | 19.7 | 74.4 | 5.9 | -5.72 | 0.51 | 0.30 | -0.09 | 3.3 | 0.004 | 0.76 | 0.0 | 0.03 | 18.97 | 0.00 | 2.000 | 29.45 | 0.91 | 18.5 | 80.5 | 1.1 | -5.04 | 2.32 | 0.80 | 0.65 | 0.86 | 19072 | 487 | 3 | 704 | 0 | 0 | 0 | logfile |
✘ | 8GWN | 34317 | 2023-02-24 | 2022-09-17 | 3.38 | 3.97 | 3.47 | 3.7 | 0.015 | 1.23 | 0.0 | 0.06 | 18.41 | 0.01 | 1.979 | 38.61 | 14.07 | 23.5 | 75.0 | 1.5 | -6.16 | 0.86 | 0.83 | 1.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21860 | 2655 | 12 | 52 | 9 | 0 | 0 | logfile |
✔ | 6LYU | 30018 | 2023-02-20 | 2020-02-15 | 4.2 | 4.46 | — | 4.2 | 0.009 | 1.16 | 6.0 | 0.06 | 15.38 | 0.01 | 1.986 | 56.95 | 1.18 | 23.1 | 76.2 | 0.7 | -6.16 | 0.86 | 0.81 | — | 4.2 | 0.003 | 0.77 | 0.0 | 0.04 | 13.81 | 0.00 | 2.066 | 21.38 | 0.00 | 10.8 | 89.1 | 0.1 | -2.53 | 0.89 | 0.85 | 0.79 | — | 11118 | 1430 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6H3J | 0134 | 2023-02-23 | 2018-07-18 | 3.7 | 3.83 | — | 3.7 | 0.007 | 0.87 | 0.0 | 0.05 | 10.17 | 0.00 | 2.025 | 43.38 | 0.05 | 23.8 | 76.2 | 0.0 | -6.63 | 0.77 | 0.85 | 3.89 | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 13.49 | 0.00 | 1.880 | 56.27 | 0.36 | 20.2 | 79.8 | 0.0 | -5.27 | 2.68 | 0.77 | 0.86 | 2.92 | 20301 | 2511 | 3 | 0 | 0 | 0 | 212 | logfile |
✔ | 7NNH | 12477 | 2023-02-17 | 2021-02-24 | 4.0 | 5.15 | — | 4.2 | 0.004 | 1.27 | 0.0 | 0.05 | 15.82 | 0.01 | 2.066 | 35.16 | 0.34 | 23.0 | 76.5 | 0.5 | -3.61 | 0.74 | 0.80 | — | 4.2 | 0.003 | 1.12 | 0.0 | 0.05 | 16.96 | 0.01 | 2.116 | 27.42 | 0.34 | 20.2 | 79.5 | 0.3 | -2.65 | 0.71 | 0.74 | 0.79 | — | 5299 | 637 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BW7 | 30229 | 2023-02-18 | 2020-04-13 | 4.1 | 4.55 | 4.28 | 4.4 | 0.008 | 1.06 | 0.0 | 0.06 | 16.20 | 0.01 | 2.050 | 40.13 | 0.00 | 23.4 | 76.6 | 0.0 | -5.62 | 0.73 | 0.67 | — | 4.4 | 0.003 | 0.79 | 0.0 | 0.05 | 15.12 | 0.00 | 2.151 | 18.52 | 0.00 | 13.1 | 86.9 | 0.0 | -3.97 | 0.75 | 0.70 | 0.62 | — | 8824 | 1091 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M62 | 23687 | 2023-02-16 | 2021-03-25 | 3.9 | 3.91 | — | 4.3 | 0.007 | 1.13 | 0.0 | 0.07 | 14.83 | 0.00 | 2.321 | 32.83 | 0.00 | 23.3 | 76.7 | 0.0 | -4.97 | 0.55 | 0.62 | 2.27 | 4.2 | 0.006 | 1.03 | 0.0 | 0.06 | 15.73 | 0.00 | 2.059 | 31.10 | 2.22 | 26.0 | 74.0 | 0.0 | -4.94 | 2.76 | 0.57 | 0.68 | 2.84 | 2380 | 320 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 6TD6 | 10464 | 2023-02-21 | 2019-11-07 | 4.76 | 5.03 | — | 4.8 | 0.010 | 1.11 | 0.0 | 0.07 | 16.37 | 0.01 | 1.777 | 55.96 | 0.35 | 22.8 | 76.8 | 0.4 | -6.33 | 0.62 | 0.70 | — | 4.8 | 0.003 | 0.69 | 0.0 | 0.04 | 14.88 | 0.00 | 1.903 | 18.97 | 0.00 | 10.5 | 89.5 | 0.0 | -1.31 | 1.44 | 0.59 | 0.69 | — | 15680 | 982 | 4 | 0 | 3 | 0 | 7766 | logfile |
✔ | 6oF4 | 20042 | 2023-02-19 | 2019-03-28 | 3.2 | 2.71 | — | 3.6 | 0.010 | 1.19 | 0.0 | 0.06 | 15.12 | 0.01 | 2.091 | 11.76 | 2.54 | 19.6 | 76.8 | 3.5 | -4.99 | 0.79 | 0.82 | 1.96 | 3.7 | 0.004 | 0.76 | 0.0 | 0.04 | 16.53 | 0.01 | 2.143 | 7.59 | 0.68 | 8.9 | 91.0 | 0.1 | 0.42 | 1.31 | 0.78 | 0.81 | 1.76 | 10998 | 1422 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CN9 | 30419 | 2023-02-24 | 2020-07-30 | 4.7 | 4.78 | — | 4.7 | 0.010 | 1.16 | 0.0 | 0.07 | 15.31 | 0.01 | 1.927 | 47.45 | 2.39 | 21.4 | 77.5 | 1.1 | -5.89 | 0.53 | 0.74 | — | 4.7 | 0.004 | 0.82 | 0.0 | 0.05 | 13.35 | 0.01 | 2.036 | 21.64 | 0.04 | 12.9 | 87.0 | 0.1 | -3.11 | 1.38 | 0.51 | 0.72 | — | 24052 | 3058 | 19 | 0 | 56 | 0 | 0 | logfile |
✔ | 5o3L | 3741 | 2023-02-20 | 2017-05-24 | 3.4 | 3.71 | 3.34 | 3.7 | 0.012 | 1.03 | 0.0 | 0.06 | 8.97 | 0.01 | 2.111 | 9.60 | 0.00 | 22.4 | 77.6 | 0.0 | -6.67 | 0.60 | 0.69 | 2.44 | 3.6 | 0.004 | 0.78 | 0.0 | 0.05 | 15.54 | 0.01 | 1.937 | 16.37 | 0.78 | 13.9 | 86.1 | 0.0 | -5.24 | 2.68 | 0.57 | 0.75 | 2.67 | 11360 | 730 | 10 | 0 | 0 | 0 | 5790 | logfile |
✔ | 7BW8 | 30230 | 2023-02-17 | 2020-04-14 | 3.8 | 4.16 | 3.79 | 4.4 | 0.009 | 1.38 | 0.0 | 0.07 | 17.39 | 0.01 | 1.974 | 49.64 | 0.00 | 22.3 | 77.7 | 0.0 | -5.01 | 0.70 | 0.66 | 0.41 | 4.4 | 0.003 | 0.93 | 0.0 | 0.05 | 18.23 | 0.01 | 2.200 | 21.41 | 0.88 | 10.6 | 89.4 | 0.0 | -3.01 | 2.07 | 0.68 | 0.63 | 0.53 | 6021 | 737 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WHR | 21673 | 2023-02-24 | 2020-04-08 | 3.99 | 4.51 | — | 4.3 | 0.015 | 1.22 | 0.0 | 0.07 | 15.42 | 0.01 | 1.968 | 30.78 | 2.94 | 21.2 | 78.0 | 0.8 | -5.90 | 0.69 | 0.73 | 1.29 | 4.3 | 0.005 | 0.77 | 0.0 | 0.05 | 15.92 | 0.00 | 2.124 | 13.66 | 0.39 | 10.4 | 89.5 | 0.2 | -1.91 | 0.52 | 0.77 | 0.83 | 1.07 | 23370 | 3166 | 10 | 0 | 14 | 0 | 0 | logfile |
✔ | 7SWN | 25476 | 2023-02-17 | 2021-11-20 | 4.3 | 3.77 | — | 3.5 | 0.007 | 1.06 | 0.0 | 0.06 | 14.58 | 0.01 | 2.203 | 41.73 | 0.00 | 21.9 | 78.1 | 0.0 | -4.82 | 0.57 | 0.68 | — | 3.5 | 0.003 | 0.82 | 0.0 | 0.05 | 13.82 | 0.01 | 2.261 | 21.52 | 0.00 | 11.3 | 88.7 | 0.0 | -3.20 | 2.08 | 0.57 | 0.68 | — | 3283 | 422 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 6H3i | 0133 | 2023-02-23 | 2018-07-18 | 3.5 | 3.59 | — | 3.5 | 0.009 | 0.92 | 0.0 | 0.05 | 10.08 | 0.01 | 2.012 | 39.59 | 0.40 | 21.4 | 78.4 | 0.2 | -5.64 | 0.78 | 0.86 | 4.47 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20599 | 2597 | 3 | 0 | 0 | 0 | 53 | logfile |
✔ | 7V1N | 31628 | 2023-02-23 | 2021-08-05 | 3.2 | 3.33 | — | 3.2 | 0.013 | 1.21 | 4.0 | 0.07 | 19.76 | 0.01 | 1.973 | 28.50 | 16.75 | 20.1 | 78.9 | 1.0 | -5.88 | 0.65 | 0.73 | 1.68 | 3.2 | 0.003 | 0.70 | 0.0 | 0.05 | 18.12 | 0.00 | 2.097 | 12.63 | 0.43 | 11.0 | 88.8 | 0.2 | -2.89 | 0.64 | 0.65 | 0.74 | 1.83 | 19156 | 2403 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SHS | 10204 | 2023-02-18 | 2019-08-08 | 4.4 | 4.36 | — | 4.3 | 0.009 | 1.02 | 0.0 | 0.06 | 12.04 | 0.00 | 2.341 | 25.68 | 0.00 | 21.1 | 78.9 | 0.0 | -5.87 | 0.69 | 0.62 | — | 4.4 | 0.002 | 0.64 | 0.0 | 0.05 | 12.90 | 0.00 | 2.248 | 6.00 | 0.00 | 16.4 | 83.6 | 0.0 | -5.26 | 1.68 | 0.73 | 0.71 | — | 7068 | 480 | 12 | 0 | 0 | 0 | 3408 | logfile |
✔ | 7N64 | 24193 | 2023-02-18 | 2021-06-07 | 4.2 | 3.94 | — | 3.9 | 0.009 | 1.04 | 0.0 | 0.06 | 15.15 | 0.01 | 2.157 | 36.86 | 1.78 | 20.8 | 78.9 | 0.3 | -3.80 | 0.65 | 0.71 | — | 3.9 | 0.006 | 0.88 | 0.0 | 0.05 | 14.10 | 0.01 | 2.055 | 26.51 | 0.13 | 16.7 | 83.3 | 0.0 | -2.94 | 0.49 | 0.64 | 0.70 | — | 7189 | 906 | 7 | 0 | 7 | 0 | 0 | logfile |