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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5G2Y | 3332 | 2024-03-16 | 2016-04-16 | 4.5 | 4.38 | — | 3.8 | 0.001 | 0.22 | 0.0 | 0.01 | 22.50 | 0.00 | 2.269 | 2.32 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.58 | 0.28 | — | 3.7 | 0.007 | 1.01 | 0.0 | 0.05 | 28.52 | 0.01 | 1.951 | 72.85 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.98 | 0.89 | 0.78 | — | 13494 | 0 | 1 | 630 | 0 | 0 | 0 | logfile |
✔ | 7XD5 | 33136 | 2024-03-11 | 2022-03-26 | 2.84 | 3.32 | 2.81 | 3.1 | 0.003 | 0.58 | 0.0 | 0.03 | 23.20 | 0.00 | 1.864 | 0.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.86 | — | 3.1 | 0.004 | 0.65 | 0.0 | 0.04 | 23.41 | 0.00 | 1.948 | 6.18 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.38 | 0.89 | 0.90 | — | 8714 | 0 | 3 | 406 | 30 | 0 | 0 | logfile |
✔ | 7R6M | 24282 | 2024-03-11 | 2021-06-22 | 3.68 | 3.27 | — | 3.4 | 0.006 | 0.94 | 0.0 | 0.04 | 25.58 | 0.01 | 2.005 | 4.72 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.53 | 0.72 | — | 3.4 | 0.007 | 0.85 | 0.0 | 0.04 | 25.53 | 0.01 | 1.757 | 17.07 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.18 | 0.55 | 0.73 | — | 7755 | 0 | 3 | 362 | 13 | 0 | 0 | logfile |
✔ | 7R6N | 24283 | 2024-03-11 | 2021-06-22 | 4.1 | 3.51 | — | 3.7 | 0.006 | 0.96 | 0.0 | 0.04 | 25.04 | 0.01 | 2.036 | 3.68 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.56 | 0.75 | — | 3.7 | 0.006 | 0.82 | 0.0 | 0.04 | 24.95 | 0.01 | 1.770 | 17.37 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.26 | 0.58 | 0.76 | — | 7588 | 0 | 1 | 354 | 12 | 0 | 0 | logfile |
✔ | 7YCi | 33740 | 2024-03-11 | 2022-07-01 | 2.98 | 4.31 | 3.09 | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 24.35 | 0.00 | 1.521 | 15.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.93 | 0.84 | — | 3.3 | 0.005 | 0.62 | 0.0 | 0.04 | 24.57 | 0.00 | 1.865 | 23.49 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.94 | 0.95 | 0.90 | — | 8474 | 0 | 2 | 395 | 4 | 0 | 0 | logfile |
✔ | 7YG9 | 33812 | 2024-03-11 | 2022-07-11 | 2.68 | 3.47 | 2.76 | 2.8 | 0.005 | 0.51 | 0.0 | 0.03 | 24.67 | 0.00 | 1.804 | 13.88 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.86 | 0.81 | — | 2.8 | 0.006 | 0.62 | 0.0 | 0.04 | 24.38 | 0.00 | 1.873 | 17.58 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.39 | 0.92 | 0.92 | — | 8630 | 0 | 3 | 404 | 8 | 0 | 0 | logfile |
✔ | 8i7N | 35223 | 2024-03-11 | 2023-02-01 | 2.98 | 3.12 | 2.92 | 3.0 | 0.006 | 0.66 | 0.0 | 0.04 | 23.30 | 0.00 | 1.982 | 2.00 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.82 | 0.83 | — | 3.0 | 0.008 | 0.74 | 0.0 | 0.04 | 23.13 | 0.01 | 1.929 | 5.26 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.95 | 0.87 | 0.91 | — | 8979 | 0 | 1 | 418 | 29 | 0 | 0 | logfile |
✔ | 6LHV | 0900 | 2024-03-16 | 2019-12-10 | 4.59 | 4.86 | — | 4.4 | 0.010 | 1.38 | 0.0 | 0.05 | 5.37 | 0.00 | 1.654 | 9.63 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.70 | 0.59 | — | 4.4 | 0.010 | 1.38 | 0.0 | 0.05 | 6.64 | 0.00 | 2.051 | 53.25 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.58 | 0.84 | 0.81 | — | 8456 | 0 | 3 | 0 | 1707 | 0 | 0 | logfile |
✔ | 6UES | 20755 | 2024-03-10 | 2019-09-23 | 3.7 | 3.94 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 26.31 | 0.00 | 2.100 | 7.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.76 | — | 3.3 | 0.007 | 0.89 | 0.0 | 0.04 | 27.66 | 0.01 | 1.797 | 37.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.86 | 0.88 | 0.83 | — | 3842 | 0 | 1 | 119 | 0 | 0 | 1291 | logfile |
✔ | 8UPT | 42455 | 2024-03-10 | 2023-10-23 | 2.8 | 3.38 | 2.84 | 2.9 | 0.016 | 2.20 | 0.0 | 0.16 | 30.45 | 0.01 | 1.072 | 99.56 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.23 | 0.59 | — | 2.9 | 0.005 | 0.73 | 0.0 | 0.04 | 27.91 | 0.01 | 2.113 | 22.27 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.95 | 0.28 | 0.87 | — | 1518 | 0 | 1 | 71 | 0 | 0 | 0 | logfile |
✔ | 8TJV | 41312 | 2024-03-14 | 2023-07-24 | 2.99 | 3.53 | 2.99 | 3.1 | 0.006 | 0.61 | 0.0 | 0.04 | 24.19 | 0.00 | 1.526 | 10.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.89 | — | 3.1 | 0.008 | 0.70 | 0.0 | 0.04 | 23.53 | 0.01 | 1.086 | 12.37 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.92 | 0.92 | — | 8778 | 0 | 2 | 409 | 32 | 0 | 0 | logfile |
✔ | 7YGC | 33815 | 2024-03-11 | 2022-07-11 | 2.65 | 3.28 | 2.77 | 2.9 | 0.007 | 0.50 | 0.0 | 0.03 | 24.40 | 0.00 | 1.778 | 12.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.83 | — | 2.9 | 0.004 | 0.55 | 0.0 | 0.03 | 24.24 | 0.00 | 1.926 | 14.01 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.47 | 0.92 | 0.90 | — | 8690 | 0 | 3 | 407 | 6 | 0 | 0 | logfile |
✔ | 7ZJ5 | 14741 | 2024-03-15 | 2022-04-08 | 4.55 | 5.91 | 5.09 | 4.4 | 0.002 | 0.65 | 0.0 | 0.04 | 23.36 | 0.00 | 2.256 | 0.50 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.92 | 0.85 | — | 4.5 | 0.008 | 0.84 | 0.0 | 0.04 | 26.06 | 0.01 | 1.650 | 66.01 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.95 | 0.94 | 0.90 | — | 12014 | 0 | 1 | 374 | 1 | 0 | 4030 | logfile |
✔ | 7XSK | 33425 | 2024-03-15 | 2022-05-14 | 3.53 | 4.49 | 3.42 | 3.4 | 0.001 | 0.44 | 0.0 | 0.02 | 24.66 | 0.00 | 1.970 | 6.98 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.76 | — | 3.4 | 0.007 | 0.69 | 0.0 | 0.04 | 25.95 | 0.01 | 1.746 | 31.76 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.93 | 0.91 | 0.83 | — | 12467 | 0 | 1 | 388 | 0 | 0 | 4168 | logfile |
✔ | 7XSL | 33426 | 2024-03-15 | 2022-05-14 | 3.84 | 4.65 | 3.83 | 3.7 | 0.002 | 0.47 | 0.0 | 0.02 | 24.69 | 0.00 | 1.935 | 8.02 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.77 | — | 3.8 | 0.007 | 0.71 | 0.0 | 0.04 | 25.81 | 0.01 | 1.808 | 34.41 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.01 | 0.92 | 0.83 | — | 12467 | 0 | 1 | 388 | 0 | 0 | 4168 | logfile |
✔ | 3J2P | 5499 | 2024-03-14 | 2012-11-30 | 3.6 | 3.28 | — | 3.4 | 0.010 | 1.92 | 0.0 | 0.12 | 17.50 | 0.02 | 2.155 | 110.32 | 20.13 | 29.7 | 46.3 | 24.1 | -7.75 | 0.42 | 0.79 | 1.08 | 3.3 | 0.004 | 0.91 | 0.0 | 0.04 | 18.21 | 0.00 | 1.845 | 75.71 | 11.64 | 20.8 | 75.4 | 3.8 | -4.38 | 0.84 | 0.39 | 0.73 | 1.07 | 9890 | 1134 | 8 | 0 | 6 | 0 | 1086 | logfile |
✔ | 5A9Z | 6396 | 2024-03-27 | 2015-07-23 | 4.7 | 4.83 | — | 4.7 | 0.013 | 1.89 | 26.0 | 0.14 | 28.05 | 0.03 | 0.000 | 199.42 | 29.15 | 25.1 | 49.6 | 25.2 | -7.73 | 0.81 | 0.65 | — | 4.7 | 0.006 | 0.94 | 0.0 | 0.04 | 25.37 | 0.01 | 0.000 | 36.51 | 0.22 | 20.5 | 77.2 | 2.3 | -4.19 | 2.91 | 0.87 | 0.81 | — | 150547 | 6671 | 58 | 4527 | 131 | 0 | 0 | logfile |
✔ | 7DA4 | 30622 | 2024-03-10 | 2020-10-14 | 4.24 | 3.75 | — | 4.2 | 0.010 | 1.54 | 0.0 | 0.08 | 17.16 | 0.01 | 2.245 | 79.80 | 0.00 | 50.0 | 50.0 | 0.0 | -8.65 | 0.39 | 0.66 | — | 4.3 | 0.004 | 0.98 | 0.0 | 0.04 | 11.88 | 0.00 | 2.201 | 17.17 | 0.00 | 25.0 | 75.0 | 0.0 | -5.95 | 3.06 | 0.36 | 0.60 | — | 507 | 66 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6o9J | 0661 | 2024-03-20 | 2019-03-14 | 3.9 | 3.92 | — | 3.9 | 0.006 | 1.25 | 25.0 | 0.10 | 24.37 | 0.01 | 0.154 | 55.29 | 23.17 | 26.6 | 58.7 | 14.7 | -7.10 | 0.74 | 0.66 | 0.16 | 3.9 | 0.011 | 1.15 | 6.0 | 0.05 | 24.09 | 0.01 | 1.282 | 34.98 | 8.65 | 25.0 | 72.2 | 2.9 | -4.91 | 1.31 | 0.80 | 0.77 | 0.18 | 142682 | 5731 | 53 | 4564 | 0 | 0 | 0 | logfile |
✔ | 7V49 | 31704 | 2024-03-10 | 2021-08-12 | 3.4 | 3.45 | — | 4.1 | 0.007 | 1.01 | 0.0 | 0.06 | 13.70 | 0.00 | 2.279 | 22.06 | 0.00 | 39.7 | 60.3 | 0.0 | -7.67 | 0.33 | 0.73 | 5.03 | 4.1 | 0.003 | 0.75 | 0.0 | 0.05 | 14.90 | 0.00 | 2.443 | 8.42 | 4.88 | 14.9 | 85.1 | 0.0 | -5.73 | 1.14 | 0.31 | 0.69 | 5.16 | 1221 | 180 | 3 | 0 | 0 | 0 | 0 | logfile |