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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8EHS | 28151 | 2023-12-08 | 2022-09-14 | 3.3 | 2.87 | 3.21 | 3.3 | 0.002 | 0.47 | 0.0 | 0.04 | 14.12 | 0.00 | 2.082 | 3.04 | 0.00 | 1.3 | 98.7 | 0.0 | 1.50 | 0.54 | 0.80 | 3.22 | 3.3 | 0.005 | 0.61 | 0.0 | 0.05 | 15.60 | 0.00 | 2.218 | 5.87 | 0.56 | 1.7 | 98.3 | 0.0 | 0.52 | 0.50 | 0.55 | 0.83 | 2.87 | 7546 | 1015 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oSL | 20185 | 2023-12-07 | 2019-05-01 | 3.0 | 3.04 | — | 3.0 | 0.010 | 1.06 | 0.0 | 0.07 | 13.47 | 0.00 | 2.308 | 12.61 | 2.44 | 12.3 | 87.7 | 0.0 | -4.40 | 0.45 | 0.79 | 1.34 | 3.0 | 0.005 | 0.78 | 0.0 | 0.06 | 15.86 | 0.00 | 2.273 | 12.36 | 7.80 | 8.2 | 91.8 | 0.0 | -3.35 | 1.24 | 0.45 | 0.80 | 2.29 | 4060 | 590 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7X54 | 33007 | 2023-12-09 | 2022-03-04 | 3.9 | 3.96 | 3.89 | 3.9 | 0.003 | 0.61 | 0.0 | 0.04 | 15.23 | 0.00 | 2.121 | 9.13 | 0.39 | 8.6 | 91.4 | 0.0 | -1.64 | 0.70 | 0.73 | 2.73 | 3.9 | 0.003 | 0.75 | 0.0 | 0.04 | 16.53 | 0.00 | 2.027 | 12.34 | 0.24 | 8.3 | 91.7 | 0.0 | -0.64 | 1.20 | 0.76 | 0.81 | 1.71 | 11575 | 1425 | 10 | 0 | 10 | 0 | 0 | logfile |
✘ | 8ADW | 15372 | 2023-12-08 | 2022-07-11 | 2.95 | 2.93 | 2.87 | 3.0 | 0.009 | 1.46 | 0.0 | 0.07 | 22.42 | 0.01 | 2.469 | 8.01 | 23.33 | 7.7 | 92.3 | 0.0 | -4.02 | 0.51 | 0.80 | 4.38 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6920 | 990 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E5F | 27911 | 2023-12-09 | 2022-08-22 | 3.8 | 4.11 | 3.84 | 4.0 | 0.017 | 1.17 | 0.0 | 0.06 | 16.51 | 0.01 | 2.029 | 22.93 | 0.00 | 12.7 | 87.3 | 0.0 | -2.96 | 0.71 | 0.84 | 3.52 | 4.1 | 0.007 | 0.96 | 1.0 | 0.05 | 16.96 | 0.00 | 2.120 | 12.79 | 0.60 | 17.3 | 82.7 | 0.1 | -3.44 | 0.48 | 0.72 | 0.86 | 3.46 | 11890 | 1465 | 5 | 0 | 20 | 0 | 0 | logfile |
✔ | 6U96 | 20694 | 2023-12-10 | 2019-09-06 | 3.8 | 3.99 | — | 3.8 | 0.014 | 1.12 | 0.0 | 0.07 | 10.70 | 0.01 | 1.838 | 1.79 | 0.63 | 6.8 | 93.2 | 0.0 | -4.97 | 0.77 | 0.89 | 3.33 | 3.8 | 0.004 | 0.73 | 0.0 | 0.05 | 14.13 | 0.00 | 2.176 | 5.38 | 0.25 | 7.7 | 92.3 | 0.0 | -2.30 | 0.66 | 0.78 | 0.90 | 2.48 | 14910 | 1890 | 15 | 0 | 5 | 0 | 0 | logfile |
✔ | 7V4A | 31705 | 2023-12-07 | 2021-08-12 | 3.2 | 3.19 | — | 3.3 | 0.002 | 0.52 | 0.0 | 0.05 | 14.28 | 0.00 | 2.423 | 8.54 | 0.00 | 7.9 | 92.1 | 0.0 | -5.80 | 0.42 | 0.82 | 3.23 | 3.2 | 0.003 | 0.60 | 0.0 | 0.05 | 16.38 | 0.00 | 2.347 | 6.77 | 0.61 | 11.8 | 88.2 | 0.0 | -3.97 | 1.70 | 0.42 | 0.81 | 3.13 | 1653 | 240 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6L1T | 0801 | 2023-12-08 | 2019-09-30 | 3.22 | 3.42 | — | 3.4 | 0.011 | 0.92 | 0.0 | 0.06 | 14.06 | 0.00 | 2.296 | 12.89 | 0.00 | 12.6 | 87.4 | 0.0 | -5.37 | 0.49 | 0.84 | 2.71 | 3.4 | 0.005 | 0.73 | 0.0 | 0.05 | 16.05 | 0.00 | 2.215 | 11.78 | 0.44 | 10.0 | 90.0 | 0.0 | -4.06 | 1.41 | 0.49 | 0.86 | 3.50 | 7010 | 1000 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WNZ | 32636 | 2023-12-08 | 2022-01-20 | 3.4 | 3.47 | — | 4.0 | 0.003 | 0.52 | 0.0 | 0.05 | 10.39 | 0.00 | 2.177 | 6.80 | 0.00 | 6.3 | 93.7 | 0.0 | -3.33 | 0.51 | 0.70 | 4.51 | 4.0 | 0.004 | 0.65 | 0.0 | 0.05 | 12.32 | 0.00 | 2.049 | 12.94 | 0.21 | 12.4 | 87.6 | 0.0 | -5.45 | 0.50 | 0.32 | 0.68 | 5.45 | 9300 | 650 | 10 | 0 | 0 | 0 | 4780 | logfile |
✔ | 6WQ2 | 21868 | 2023-12-08 | 2020-04-28 | 4.0 | 4.59 | — | 4.0 | 0.005 | 0.71 | 0.0 | 0.04 | 16.89 | 0.00 | 2.043 | 19.10 | 0.02 | 8.1 | 91.9 | 0.0 | -2.84 | 0.44 | 0.83 | — | 4.0 | 0.005 | 1.01 | 0.0 | 0.05 | 18.54 | 0.01 | 1.993 | 27.76 | 0.68 | 8.2 | 91.8 | 0.0 | -0.81 | 1.70 | 0.44 | 0.83 | — | 56240 | 6052 | 36 | 448 | 0 | 0 | 0 | logfile |
✔ | 6QJP | 4565 | 2023-12-07 | 2019-01-24 | 3.5 | 3.64 | 2.32 | 4.1 | 0.009 | 1.01 | 0.0 | 0.07 | 9.52 | 0.01 | 2.605 | 1.16 | 0.00 | 3.2 | 96.8 | 0.0 | -2.50 | 0.37 | 0.74 | 3.05 | 4.2 | 0.004 | 0.77 | 0.0 | 0.05 | 12.80 | 0.00 | 2.338 | 11.00 | 0.00 | 4.3 | 95.7 | 0.0 | -3.48 | 1.60 | 0.32 | 0.73 | 4.73 | 816 | 105 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iBN | 35344 | 2023-12-08 | 2023-02-10 | 3.03 | 3.55 | 3.13 | 3.5 | 0.007 | 0.99 | 0.0 | 0.06 | 14.42 | 0.00 | 2.296 | 8.00 | 0.00 | 4.0 | 96.0 | 0.0 | -1.98 | 0.60 | 0.53 | 0.83 | 3.5 | 0.003 | 0.62 | 0.0 | 0.05 | 15.88 | 0.00 | 2.100 | 15.94 | 0.33 | 5.1 | 94.9 | 0.0 | -0.46 | 1.17 | 0.62 | 0.57 | 1.29 | 8940 | 1224 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8A7o | 15222 | 2023-12-07 | 2022-06-21 | 3.0 | 3.15 | 2.97 | 3.0 | 0.002 | 0.55 | 0.0 | 0.04 | 11.28 | 0.00 | 2.418 | 6.71 | 0.00 | 2.9 | 97.1 | 0.0 | -3.59 | 0.50 | 0.88 | 5.55 | 3.0 | 0.005 | 0.67 | 0.0 | 0.05 | 14.82 | 0.00 | 2.251 | 5.54 | 0.60 | 7.9 | 92.1 | 0.0 | -3.62 | 4.59 | 0.46 | 0.90 | 5.21 | 4362 | 528 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VCC | 21148 | 2023-12-08 | 2019-12-20 | 3.6 | 3.10 | 3.54 | 3.5 | 0.004 | 0.66 | 0.0 | 0.05 | 12.50 | 0.01 | 2.253 | 4.58 | 0.00 | 3.6 | 96.4 | 0.0 | -4.54 | 0.53 | 0.68 | 2.77 | 3.4 | 0.003 | 0.68 | 0.0 | 0.05 | 15.88 | 0.00 | 2.032 | 10.75 | 0.12 | 2.4 | 97.6 | 0.0 | -1.97 | 1.68 | 0.56 | 0.72 | 3.38 | 7572 | 936 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XYP | 10651 | 2023-12-07 | 2020-01-30 | 3.29 | 3.37 | 3.04 | 3.4 | 0.008 | 0.64 | 0.0 | 0.05 | 13.98 | 0.00 | 2.151 | 8.09 | 0.00 | 2.8 | 97.2 | 0.0 | -5.04 | 0.47 | 0.84 | 4.49 | 3.4 | 0.004 | 0.56 | 0.0 | 0.05 | 15.99 | 0.00 | 2.267 | 5.33 | 0.41 | 2.1 | 97.9 | 0.0 | -3.56 | 0.35 | 0.47 | 0.85 | 5.11 | 4955 | 725 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RX4 | 24724 | 2023-12-10 | 2021-08-21 | 3.8 | 3.99 | — | 4.0 | 0.003 | 0.49 | 0.0 | 0.04 | 13.38 | 0.00 | 1.928 | 12.86 | 0.00 | 0.0 | 100.0 | 0.0 | 6.26 | 0.60 | 0.78 | 1.41 | 3.9 | 0.003 | 0.51 | 0.0 | 0.04 | 16.36 | 0.00 | 2.337 | 5.07 | 1.27 | 0.0 | 100.0 | 0.0 | 6.07 | 0.49 | 0.62 | 0.80 | 0.89 | 13560 | 1740 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SST | 10305 | 2023-12-07 | 2019-09-09 | 3.4 | 3.46 | — | 3.4 | 0.009 | 0.94 | 0.0 | 0.07 | 16.79 | 0.00 | 2.430 | 5.73 | 2.13 | 10.1 | 89.9 | 0.0 | -4.47 | 0.56 | 0.80 | 6.33 | 3.4 | 0.008 | 0.76 | 0.0 | 0.06 | 14.95 | 0.00 | 2.266 | 10.97 | 0.43 | 17.2 | 82.8 | 0.0 | -4.97 | 0.49 | 0.59 | 0.84 | 4.82 | 4900 | 730 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PES | 20331 | 2023-12-07 | 2019-06-20 | 3.6 | 3.82 | — | 4.0 | 0.009 | 0.70 | 0.0 | 0.06 | 12.87 | 0.01 | 2.432 | 11.45 | 0.00 | 12.3 | 87.7 | 0.0 | -1.79 | 0.38 | 0.78 | 1.73 | 4.0 | 0.004 | 0.61 | 0.0 | 0.05 | 14.62 | 0.00 | 2.275 | 9.16 | 0.24 | 7.5 | 92.5 | 0.0 | -2.54 | 0.55 | 0.43 | 0.82 | 2.73 | 4040 | 590 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SAQ | 24953 | 2023-12-07 | 2021-09-23 | 2.9 | 2.87 | — | 3.1 | 0.006 | 0.84 | 0.0 | 0.07 | 14.71 | 0.02 | 2.241 | 11.87 | 0.00 | 12.8 | 87.2 | 0.0 | -3.19 | 0.57 | 0.76 | 4.42 | 3.1 | 0.004 | 0.78 | 0.0 | 0.07 | 15.79 | 0.00 | 2.181 | 8.53 | 2.06 | 7.5 | 92.5 | 0.0 | -3.21 | 1.17 | 0.50 | 0.81 | 4.85 | 5710 | 675 | 10 | 0 | 20 | 0 | 0 | logfile |
✔ | 6N9Y | 0383 | 2023-12-07 | 2018-12-04 | 4.0 | 3.80 | — | 3.7 | 0.008 | 1.10 | 0.0 | 0.05 | 10.30 | 0.01 | 2.229 | 4.80 | 0.42 | 9.1 | 90.9 | 0.0 | -4.98 | 0.38 | 0.73 | — | 3.7 | 0.003 | 0.68 | 0.0 | 0.04 | 15.57 | 0.00 | 2.156 | 13.06 | 0.00 | 7.8 | 92.2 | 0.0 | -0.84 | 1.77 | 0.40 | 0.79 | — | 4527 | 552 | 1 | 0 | 0 | 0 | 0 | logfile |