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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7M62 | 23687 | 2022-04-04 | 2021-03-25 | 3.9 | 3.91 | — | 4.3 | 0.007 | 1.13 | 0.0 | 0.07 | 14.83 | 0.00 | 2.321 | 32.83 | 0.00 | 23.3 | 76.7 | 0.0 | -4.97 | 0.55 | 0.62 | 2.27 | 4.3 | 0.003 | 0.99 | 0.0 | 0.05 | 15.87 | 0.00 | 2.105 | 21.17 | 0.00 | 22.7 | 77.3 | 0.0 | -4.56 | 2.11 | 0.57 | 0.65 | 3.17 | 2380 | 320 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 7M65 | 23689 | 2022-04-04 | 2021-03-25 | 4.1 | 4.11 | — | 4.3 | 0.009 | 1.40 | 0.0 | 0.10 | 12.05 | 0.00 | 2.392 | 33.63 | 0.00 | 17.6 | 82.4 | 0.0 | -6.09 | 0.52 | 0.73 | — | 4.2 | 0.005 | 0.96 | 0.0 | 0.05 | 12.00 | 0.00 | 2.126 | 25.73 | 0.00 | 17.3 | 82.7 | 0.0 | -6.33 | 4.44 | 0.52 | 0.73 | — | 2025 | 275 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 7M64 | 23688 | 2022-04-04 | 2021-03-25 | 4.0 | 4.02 | — | 4.3 | 0.008 | 1.15 | 0.0 | 0.07 | 10.07 | 0.00 | 2.451 | 19.77 | 0.00 | 8.7 | 91.3 | 0.0 | -3.84 | 0.52 | 0.75 | — | 4.3 | 0.003 | 0.90 | 0.0 | 0.04 | 11.30 | 0.00 | 2.242 | 6.78 | 0.00 | 5.2 | 94.8 | 0.0 | -4.00 | 1.14 | 0.51 | 0.74 | — | 1850 | 250 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 7oSL | 13054 | 2022-04-09 | 2021-06-09 | 3.1 | 2.94 | 3.08 | 3.1 | 0.010 | 1.26 | 0.0 | 0.07 | 12.14 | 0.01 | 2.374 | 0.44 | 0.00 | 1.3 | 98.7 | 0.0 | -2.09 | 0.61 | 0.67 | 2.20 | 3.1 | 0.002 | 0.53 | 0.0 | 0.04 | 14.71 | 0.00 | 2.203 | 2.82 | 0.07 | 2.1 | 97.9 | 0.0 | 1.19 | 0.75 | 0.73 | 0.78 | 1.81 | 47885 | 2935 | 9 | 0 | 0 | 0 | 24225 | logfile |
✔ | 7M61 | 23686 | 2022-04-04 | 2021-03-25 | 3.8 | 3.83 | — | 4.1 | 0.005 | 1.01 | 0.0 | 0.08 | 12.79 | 0.00 | 2.218 | 22.02 | 0.00 | 14.3 | 85.7 | 0.0 | -4.63 | 0.49 | 0.73 | 2.45 | 3.9 | 0.004 | 0.78 | 0.0 | 0.05 | 14.97 | 0.00 | 2.122 | 20.78 | 1.03 | 14.8 | 85.2 | 0.0 | -4.62 | 0.86 | 0.47 | 0.75 | 2.83 | 1690 | 230 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 7RLA | 24523 | 2022-04-08 | 2021-07-23 | 3.1 | 3.89 | — | 3.4 | 0.003 | 0.78 | 0.0 | 0.05 | 13.59 | 0.00 | 2.035 | 10.00 | 0.03 | 7.5 | 92.5 | 0.0 | -1.72 | 0.79 | 0.79 | 1.20 | 3.4 | 0.004 | 0.64 | 0.0 | 0.04 | 15.16 | 0.00 | 1.866 | 10.12 | 0.16 | 6.0 | 94.0 | 0.0 | -0.14 | 1.69 | 0.81 | 0.84 | 1.37 | 34944 | 4422 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 7RTV | 24690 | 2022-04-04 | 2021-08-15 | 3.96 | 4.06 | — | 4.1 | 0.003 | 0.68 | 0.0 | 0.04 | 16.49 | 0.00 | 2.207 | 14.04 | 0.32 | 2.8 | 97.2 | 0.0 | 3.61 | 0.41 | 0.63 | 0.10 | 4.1 | 0.004 | 0.87 | 0.0 | 0.05 | 18.50 | 0.00 | 2.197 | 15.60 | 0.32 | 3.0 | 97.0 | 0.0 | 2.57 | 0.49 | 0.42 | 0.64 | 0.60 | 2881 | 366 | 3 | 0 | 6 | 0 | 0 | logfile |
✔ | 6YT5 | 10912 | 2022-04-09 | 2020-04-23 | 3.0 | 2.67 | — | 3.3 | 0.010 | 0.73 | 0.0 | 0.05 | 15.51 | 0.00 | 2.196 | 13.76 | 0.15 | 8.0 | 92.0 | 0.0 | -4.28 | 0.85 | 0.81 | 2.08 | 3.3 | 0.004 | 0.76 | 0.0 | 0.04 | 17.73 | 0.01 | 2.144 | 11.76 | 1.90 | 3.6 | 96.4 | 0.0 | 0.71 | 0.54 | 0.83 | 0.81 | 1.27 | 39078 | 5040 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PEA | 13350 | 2022-04-04 | 2021-08-09 | 4.07 | 4.50 | — | 4.2 | 0.002 | 0.47 | 0.0 | 0.04 | 14.27 | 0.00 | 2.239 | 3.97 | 4.24 | 4.7 | 95.3 | 0.0 | -2.53 | 0.84 | 0.72 | — | 4.2 | 0.003 | 0.65 | 0.0 | 0.04 | 13.42 | 0.00 | 2.142 | 11.58 | 0.00 | 3.4 | 96.6 | 0.0 | 0.63 | 1.51 | 0.86 | 0.77 | — | 58252 | 7222 | 10 | 0 | 114 | 0 | 0 | logfile |
✔ | 7MKi | 23895 | 2022-04-08 | 2021-04-23 | 3.5 | 3.43 | 3.54 | 3.5 | 0.019 | 0.77 | 0.0 | 0.06 | 16.91 | 0.00 | 2.170 | 6.42 | 5.35 | 7.1 | 92.8 | 0.0 | -1.84 | 0.68 | 0.80 | 2.21 | 3.5 | 0.004 | 0.66 | 0.0 | 0.04 | 17.13 | 0.01 | 1.957 | 9.23 | 0.10 | 6.2 | 93.8 | 0.0 | -1.40 | 0.22 | 0.69 | 0.79 | 1.89 | 30919 | 3676 | 10 | 96 | 6 | 0 | 0 | logfile |
✔ | 7S67 | 24852 | 2022-04-06 | 2021-09-13 | 3.8 | 3.64 | 3.80 | 3.9 | 0.013 | 1.39 | 0.0 | 0.07 | 11.90 | 0.01 | 1.815 | 5.58 | 0.00 | 1.5 | 98.5 | 0.0 | 0.25 | 0.70 | 0.73 | 2.10 | 3.8 | 0.005 | 0.77 | 0.0 | 0.05 | 16.35 | 0.01 | 1.910 | 13.76 | 0.66 | 2.4 | 97.6 | 0.0 | 0.06 | 2.75 | 0.71 | 0.80 | 1.69 | 23058 | 2892 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 7S66 | 24851 | 2022-04-06 | 2021-09-13 | 2.8 | 3.06 | 2.88 | 3.1 | 0.013 | 1.34 | 0.0 | 0.06 | 10.54 | 0.01 | 1.770 | 2.28 | 0.00 | 1.4 | 98.6 | 0.0 | 0.50 | 0.75 | 0.83 | 3.82 | 3.0 | 0.003 | 0.54 | 0.0 | 0.04 | 16.32 | 0.00 | 1.869 | 5.01 | 2.04 | 1.6 | 98.4 | 0.0 | 0.85 | 1.36 | 0.73 | 0.85 | 3.48 | 23242 | 2910 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 7S65 | 24850 | 2022-04-06 | 2021-09-13 | 3.2 | 3.04 | 3.23 | 3.3 | 0.014 | 1.46 | 0.0 | 0.07 | 11.66 | 0.01 | 1.385 | 8.25 | 0.26 | 2.0 | 98.0 | 0.0 | 0.19 | 0.64 | 0.74 | 3.55 | 3.2 | 0.007 | 0.68 | 0.0 | 0.04 | 15.87 | 0.01 | 1.819 | 9.43 | 0.17 | 2.4 | 97.6 | 0.0 | 0.47 | 0.69 | 0.65 | 0.79 | 3.23 | 22049 | 2760 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 7N6Q | 24208 | 2022-04-05 | 2021-06-08 | 3.87 | 3.99 | — | 4.0 | 0.014 | 1.80 | 0.0 | 0.08 | 16.00 | 0.00 | 2.223 | 7.63 | 1.55 | 7.5 | 92.5 | 0.0 | -4.50 | 0.51 | 0.68 | 2.01 | 4.0 | 0.003 | 0.73 | 0.0 | 0.05 | 17.54 | 0.00 | 2.201 | 9.97 | 0.31 | 5.5 | 94.5 | 0.0 | 0.01 | 2.52 | 0.66 | 0.81 | 1.47 | 12752 | 1500 | 8 | 0 | 16 | 0 | 0 | logfile |
✘ | 7oY8 | 13110 | 2022-04-06 | 2021-06-23 | 2.5 | 2.51 | — | 2.6 | 0.008 | 0.91 | 0.0 | 0.05 | 15.06 | 0.01 | 1.197 | 0.65 | 0.21 | 2.4 | 97.6 | 0.0 | 0.49 | 0.72 | 0.78 | 2.62 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22902 | 2293 | 103 | 0 | 68 | 372 | 0 | logfile |
✔ | 7BCQ | 12142 | 2022-04-06 | 2020-12-21 | 3.43 | 3.61 | 3.36 | 3.8 | 0.013 | 1.05 | 0.0 | 0.15 | 13.48 | 0.01 | 2.098 | 3.22 | 0.00 | 5.5 | 94.5 | 0.0 | -0.68 | 0.58 | 0.73 | 2.69 | 3.8 | 0.003 | 0.68 | 0.0 | 0.15 | 14.22 | 0.00 | 2.023 | 7.79 | 0.00 | 5.0 | 95.0 | 0.0 | 0.94 | 0.49 | 0.59 | 0.77 | 2.46 | 20160 | 1326 | 6 | 0 | 3 | 0 | 10299 | logfile |
✔ | 7BCT | 12143 | 2022-04-06 | 2020-12-21 | 3.37 | 3.33 | 3.31 | 3.4 | 0.009 | 1.15 | 0.0 | 0.15 | 13.35 | 0.01 | 2.299 | 4.43 | 0.00 | 5.7 | 94.3 | 0.0 | -0.74 | 0.51 | 0.67 | 2.81 | 3.4 | 0.004 | 0.79 | 0.0 | 0.17 | 14.90 | 0.00 | 2.003 | 10.40 | 0.58 | 5.9 | 94.1 | 0.0 | 1.14 | 0.79 | 0.56 | 0.73 | 2.59 | 20091 | 1326 | 3 | 0 | 0 | 0 | 10299 | logfile |
✔ | 7K8D | 22728 | 2022-04-05 | 2020-09-26 | 4.33 | 4.48 | — | 4.7 | 0.004 | 1.12 | 0.0 | 0.06 | 12.53 | 0.01 | 2.205 | 23.61 | 1.86 | 4.3 | 95.7 | 0.0 | -2.98 | 0.33 | 0.40 | — | 4.7 | 0.003 | 0.83 | 0.0 | 0.04 | 13.33 | 0.01 | 2.120 | 13.72 | 0.00 | 4.3 | 95.7 | 0.0 | 0.70 | 1.45 | 0.41 | 0.49 | — | 5529 | 725 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JZY | 22584 | 2022-04-07 | 2020-09-02 | 3.6 | 3.61 | — | 3.6 | 0.009 | 0.96 | 0.0 | 0.05 | 16.34 | 0.01 | 2.236 | 5.56 | 0.85 | 7.0 | 93.0 | 0.0 | -3.78 | 0.81 | 0.85 | 2.54 | 3.5 | 0.006 | 0.89 | 1.0 | 0.04 | 17.32 | 0.00 | 1.653 | 12.31 | 0.09 | 5.9 | 94.1 | 0.0 | -0.96 | 0.49 | 0.81 | 0.84 | 2.12 | 24539 | 3024 | 12 | 61 | 0 | 0 | 0 | logfile |
✔ | 7K9J | 22750 | 2022-04-07 | 2020-09-29 | 3.0 | 3.59 | 3.08 | 3.5 | 0.004 | 0.74 | 1.0 | 0.05 | 14.42 | 0.01 | 2.084 | 8.81 | 0.57 | 3.8 | 96.2 | 0.0 | -0.88 | 0.73 | 0.78 | 2.65 | 3.5 | 0.004 | 0.65 | 0.0 | 0.05 | 16.07 | 0.01 | 2.069 | 8.67 | 1.14 | 4.5 | 95.5 | 0.0 | -0.48 | 0.44 | 0.73 | 0.80 | 2.31 | 29766 | 3627 | 54 | 0 | 111 | 0 | 0 | logfile |