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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7B5C | 12025 | 2023-08-12 | 2020-12-03 | 3.7 | 3.81 | 3.61 | 3.8 | 0.005 | 0.86 | 0.0 | 0.05 | 15.21 | 0.01 | 2.239 | 7.43 | 0.78 | 5.9 | 94.1 | 0.0 | -3.64 | 0.62 | 0.77 | 1.51 | 3.8 | 0.004 | 0.72 | 0.0 | 0.04 | 16.46 | 0.01 | 2.097 | 11.63 | 0.55 | 6.2 | 93.8 | 0.0 | -0.41 | 0.66 | 0.62 | 0.77 | 1.34 | 11770 | 1436 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7WLJ | 32585 | 2023-08-11 | 2022-01-13 | 3.9 | 4.18 | — | 4.1 | 0.009 | 1.01 | 0.0 | 0.14 | 14.59 | 0.00 | 1.912 | 18.90 | 0.10 | 6.7 | 93.3 | 0.0 | 0.03 | 0.59 | 0.80 | 1.62 | 4.1 | 0.003 | 0.88 | 0.0 | 0.05 | 16.21 | 0.00 | 2.150 | 16.14 | 0.20 | 6.6 | 93.4 | 0.0 | -0.06 | 0.67 | 0.60 | 0.80 | 0.94 | 9450 | 1135 | 1 | 0 | 15 | 0 | 0 | logfile |
✔ | 7VFX | 31962 | 2023-08-11 | 2021-09-14 | 2.8 | 2.73 | 2.85 | 2.9 | 0.003 | 0.65 | 0.0 | 0.05 | 13.95 | 0.00 | 2.225 | 5.38 | 0.00 | 3.1 | 96.9 | 0.0 | 0.41 | 0.70 | 0.87 | 3.94 | 2.9 | 0.002 | 0.55 | 0.0 | 0.04 | 16.05 | 0.00 | 2.136 | 4.82 | 0.72 | 2.9 | 97.1 | 0.0 | 1.09 | 1.24 | 0.71 | 0.89 | 3.74 | 9004 | 1139 | 7 | 0 | 4 | 0 | 0 | logfile |
✔ | 7S1X | 24807 | 2023-08-12 | 2021-09-02 | 2.9 | 3.15 | — | 3.3 | 0.005 | 0.83 | 2.0 | 0.05 | 12.05 | 0.01 | 2.052 | 18.39 | 0.17 | 9.9 | 90.1 | 0.0 | -0.65 | 0.51 | 0.72 | 3.89 | 3.2 | 0.003 | 0.64 | 2.0 | 0.04 | 15.22 | 0.00 | 2.090 | 10.45 | 3.55 | 8.2 | 91.8 | 0.0 | 0.13 | 0.52 | 0.61 | 0.81 | 3.52 | 12658 | 1742 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 7T2H | 25613 | 2023-08-10 | 2021-12-04 | 3.2 | 3.41 | 3.23 | 3.4 | 0.004 | 0.52 | 0.0 | 0.15 | 14.12 | 0.00 | 2.158 | 8.69 | 0.65 | 3.6 | 96.4 | 0.0 | -3.17 | 0.66 | 0.81 | 3.01 | 3.4 | 0.004 | 0.71 | 0.0 | 0.09 | 15.51 | 0.00 | 2.167 | 10.26 | 0.43 | 2.7 | 97.3 | 0.0 | -0.64 | 0.42 | 0.60 | 0.79 | 2.44 | 8677 | 1119 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7Ji0 | 22341 | 2023-08-09 | 2020-07-21 | 2.95 | 3.30 | 3.08 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 12.97 | 0.00 | 2.233 | 3.94 | 5.91 | 4.5 | 95.5 | 0.0 | -3.04 | 0.73 | 0.84 | 4.32 | 3.2 | 0.002 | 0.47 | 0.0 | 0.04 | 15.32 | 0.00 | 2.210 | 3.66 | 2.96 | 3.8 | 96.2 | 0.0 | 1.47 | 0.45 | 0.70 | 0.83 | 3.46 | 3556 | 432 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6V11 | 21009 | 2023-08-17 | 2019-11-19 | 3.8 | 4.18 | 3.97 | 4.1 | 0.008 | 1.07 | 0.0 | 0.06 | 11.18 | 0.01 | 2.243 | 6.55 | 0.90 | 8.1 | 91.9 | 0.0 | -4.51 | 0.79 | 0.81 | 1.63 | 4.1 | 0.003 | 0.73 | 0.0 | 0.04 | 14.42 | 0.00 | 2.134 | 11.45 | 0.33 | 5.1 | 94.9 | 0.0 | -0.85 | 2.18 | 0.80 | 0.82 | 1.07 | 22626 | 2915 | 11 | 0 | 5 | 0 | 0 | logfile |
✔ | 8EJC | 28177 | 2023-08-10 | 2022-09-16 | 3.0 | 3.01 | 3.04 | 3.1 | 0.006 | 0.64 | 0.0 | 0.04 | 13.25 | 0.00 | 2.199 | 9.48 | 0.00 | 3.6 | 96.4 | 0.0 | 1.20 | 0.69 | 0.84 | 3.08 | 3.2 | 0.004 | 0.63 | 0.0 | 0.04 | 16.03 | 0.00 | 2.174 | 9.36 | 1.66 | 3.7 | 96.3 | 0.0 | 1.07 | 0.36 | 0.69 | 0.85 | 2.25 | 8659 | 1132 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7SP7 | 25367 | 2023-08-10 | 2021-11-02 | 3.1 | 3.61 | — | 3.5 | 0.008 | 0.68 | 0.0 | 0.05 | 13.90 | 0.00 | 2.219 | 3.57 | 0.00 | 1.4 | 98.6 | 0.0 | 2.52 | 0.60 | 0.73 | 1.83 | 3.5 | 0.003 | 0.52 | 0.0 | 0.04 | 15.63 | 0.00 | 2.219 | 5.74 | 0.32 | 1.9 | 98.1 | 0.0 | 1.72 | 0.58 | 0.67 | 0.81 | 3.22 | 6052 | 739 | 4 | 1 | 4 | 0 | 0 | logfile |
✔ | 6YN5 | 10849 | 2023-08-10 | 2020-04-10 | 2.7 | 2.87 | 2.79 | 2.8 | 0.008 | 0.84 | 0.0 | 0.05 | 11.70 | 0.01 | 2.247 | 3.71 | 0.03 | 1.9 | 98.1 | 0.0 | -0.33 | 0.84 | 0.88 | 4.96 | 2.8 | 0.005 | 0.56 | 0.0 | 0.04 | 13.61 | 0.00 | 2.157 | 6.22 | 0.90 | 1.6 | 98.4 | 0.0 | 0.74 | 1.24 | 0.85 | 0.90 | 4.40 | 56994 | 7110 | 10 | 0 | 0 | 0 | 0 | logfile |
✘ | 7WF7 | 32461 | 2023-08-10 | 2021-12-26 | 3.4 | 3.19 | — | 3.2 | 0.004 | 0.83 | 0.0 | 0.05 | 13.56 | 0.00 | 2.288 | 2.88 | 0.00 | 4.4 | 95.6 | 0.0 | -1.14 | 0.55 | 0.64 | 1.44 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8136 | 1034 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 6SoF | 10273 | 2023-08-21 | 2019-08-29 | 4.3 | 4.23 | 4.20 | 4.1 | 0.006 | 0.93 | 0.0 | 0.05 | 14.59 | 0.01 | 2.017 | 10.51 | 0.62 | 17.7 | 82.3 | 0.0 | -5.47 | 0.82 | 0.72 | — | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 13.36 | 0.00 | 1.934 | 15.84 | 0.00 | 15.3 | 84.7 | 0.0 | -3.90 | 1.45 | 0.82 | 0.72 | — | 30333 | 1966 | 12 | 0 | 0 | 0 | 14564 | logfile |
✔ | 8GSZ | 34244 | 2023-08-09 | 2022-09-07 | 3.65 | 3.14 | 3.68 | 3.8 | 0.006 | 0.86 | 0.0 | 0.05 | 15.61 | 0.01 | 2.241 | 12.76 | 0.39 | 2.7 | 97.3 | 0.0 | -5.38 | 0.62 | 0.76 | 1.72 | 3.8 | 0.003 | 0.69 | 0.0 | 0.04 | 17.49 | 0.00 | 2.123 | 9.67 | 0.39 | 4.0 | 96.0 | 0.0 | -0.70 | 0.76 | 0.62 | 0.76 | 0.90 | 4870 | 620 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7FiY | 31606 | 2023-08-11 | 2021-08-01 | 3.4 | 3.64 | — | 3.6 | 0.004 | 0.82 | 0.0 | 0.06 | 8.14 | 0.01 | 2.275 | 3.69 | 0.00 | 2.6 | 97.4 | 0.0 | -1.10 | 0.67 | 0.75 | 2.44 | 3.6 | 0.003 | 0.58 | 0.0 | 0.04 | 14.14 | 0.00 | 2.105 | 9.47 | 0.31 | 2.5 | 97.5 | 0.0 | 1.25 | 1.71 | 0.70 | 0.80 | 2.00 | 9367 | 1152 | 7 | 0 | 6 | 0 | 0 | logfile |
✔ | 7EW4 | 31347 | 2023-08-11 | 2021-05-24 | 3.2 | 3.38 | — | 3.4 | 0.003 | 0.51 | 0.0 | 0.04 | 13.43 | 0.00 | 2.237 | 7.77 | 0.00 | 2.0 | 98.0 | 0.0 | 1.05 | 0.67 | 0.74 | 2.41 | 3.4 | 0.002 | 0.52 | 0.0 | 0.04 | 15.13 | 0.00 | 2.101 | 8.96 | 0.62 | 2.8 | 97.2 | 0.0 | 0.62 | 0.39 | 0.70 | 0.81 | 2.46 | 8929 | 1145 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 6X96 | 22102 | 2023-08-15 | 2020-06-02 | 3.4 | 4.14 | 3.71 | 4.0 | 0.022 | 1.74 | 0.0 | 0.13 | 10.21 | 0.01 | 2.363 | 0.64 | 0.00 | 2.1 | 97.9 | 0.0 | 1.05 | 0.77 | 0.80 | 3.02 | 4.0 | 0.004 | 0.80 | 0.0 | 0.05 | 14.89 | 0.00 | 2.196 | 10.96 | 0.55 | 3.9 | 96.0 | 0.1 | 0.05 | 2.47 | 0.66 | 0.72 | 2.29 | 18915 | 2322 | 27 | 0 | 63 | 0 | 0 | logfile |
✔ | 7Y9T | 33691 | 2023-08-10 | 2022-06-26 | 3.1 | 3.31 | 3.07 | 3.3 | 0.018 | 1.56 | 18.0 | 0.09 | 11.12 | 0.01 | 2.305 | 4.09 | 0.96 | 6.7 | 93.3 | 0.0 | -6.23 | 0.69 | 0.87 | 3.51 | 3.3 | 0.003 | 0.67 | 0.0 | 0.04 | 13.62 | 0.00 | 2.220 | 5.37 | 0.36 | 4.5 | 95.5 | 0.0 | -1.47 | 0.59 | 0.67 | 0.87 | 3.20 | 7726 | 992 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EW2 | 31345 | 2023-08-11 | 2021-05-24 | 3.1 | 3.30 | — | 3.4 | 0.003 | 0.77 | 0.0 | 0.05 | 14.09 | 0.00 | 2.201 | 10.55 | 0.61 | 1.7 | 98.3 | 0.0 | -0.25 | 0.60 | 0.68 | 1.56 | 3.4 | 0.003 | 0.55 | 0.0 | 0.04 | 16.07 | 0.00 | 2.187 | 8.87 | 0.41 | 3.9 | 96.1 | 0.0 | 0.20 | 0.42 | 0.60 | 0.74 | 1.57 | 9001 | 1149 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7KTV | 23031 | 2023-08-10 | 2020-11-24 | 4.5 | 4.83 | — | 4.5 | 0.006 | 1.06 | 0.0 | 0.06 | 12.50 | 0.01 | 2.221 | 17.73 | 0.12 | 6.5 | 93.5 | 0.0 | -5.20 | 0.80 | 0.79 | — | 6.7 | 0.003 | 0.77 | 0.0 | 0.04 | 13.13 | 0.00 | 2.155 | 19.49 | 0.12 | 3.8 | 96.2 | 0.0 | -0.43 | 0.90 | 0.79 | 0.76 | — | 7577 | 995 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ET1 | 28583 | 2023-08-23 | 2022-10-15 | 4.48 | 5.31 | 5.46 | 4.9 | 0.003 | 0.82 | 0.0 | 0.05 | 15.01 | 0.00 | 2.180 | 29.82 | 0.00 | 11.5 | 88.5 | 0.0 | -3.55 | 0.75 | 0.57 | — | 4.9 | 0.003 | 0.78 | 0.0 | 0.05 | 15.14 | 0.01 | 2.114 | 32.83 | 0.00 | 13.3 | 86.7 | 0.0 | -3.55 | 0.71 | 0.76 | 0.61 | — | 35976 | 4368 | 24 | 0 | 0 | 0 | 0 | logfile |