Table showing results for November 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7S66	24851	2021-11-03	2021-09-13	2.8	3.06	2.88	3.1	0.013	1.34	0.0	0.06	10.54	0.01	1.770	2.28	0.00	1.4	98.6	0.0	0.50	0.75	0.83	3.82	3.0	0.004	0.54	0.0	0.04	16.37	0.00	1.940	5.64	2.29	1.8	98.2	0.0	0.93	1.37	0.75	0.86	3.51	23242	2910	12	0	24	0	0	logfile
✔	7LB6	23264	2021-11-06	2021-01-07	3.16	3.80	—	3.5	0.004	0.56	0.0	0.04	13.24	0.00	2.112	10.46	0.00	2.3	97.7	0.0	-1.06	0.90	0.87	2.63	3.5	0.010	0.68	0.0	0.05	14.88	0.00	2.128	12.78	4.09	5.3	94.7	0.0	0.69	1.01	0.91	0.89	2.68	47760	6276	24	0	0	0	0	logfile
✔	7S65	24850	2021-11-03	2021-09-13	3.2	3.04	3.23	3.3	0.014	1.46	0.0	0.07	11.66	0.01	1.385	8.25	0.26	2.0	98.0	0.0	0.19	0.64	0.74	3.55	3.2	0.012	0.89	0.0	0.04	15.78	0.01	1.895	10.39	0.35	2.7	97.3	0.0	0.25	0.70	0.66	0.79	3.13	22049	2760	12	0	24	0	0	logfile
✔	7N6Q	24208	2021-11-02	2021-06-08	3.87	3.99	—	4.0	0.024	1.83	0.0	0.47	16.47	0.01	2.223	7.63	1.55	7.5	92.5	0.0	-4.50	0.51	0.68	2.01	4.0	0.003	1.13	0.0	0.15	17.49	0.00	2.234	15.55	0.39	4.9	95.1	0.0	0.31	3.14	0.66	0.80	1.51	12752	1500	8	0	16	0	0	logfile
✔	7oi7	12920	2021-11-05	2021-05-11	3.5	3.35	—	3.3	0.006	0.95	1.0	0.05	15.02	0.01	2.041	6.91	0.10	4.3	95.7	0.0	-1.48	0.73	0.75	2.42	3.3	0.003	0.66	0.0	0.04	16.39	0.01	1.865	12.16	0.36	3.6	96.3	0.0	-0.08	0.60	0.73	0.75	1.86	89747	8101	60	1110	52	0	0	logfile
✔	7BCQ	12142	2021-11-03	2020-12-21	3.43	3.61	3.36	3.8	0.013	1.05	0.0	0.15	13.48	0.01	2.098	3.22	0.00	5.5	94.5	0.0	-0.68	0.58	0.73	2.69	3.8	0.003	0.68	0.0	0.15	14.20	0.00	2.025	7.74	0.10	5.0	95.0	0.0	0.92	0.54	0.60	0.77	2.56	20160	1326	6	0	3	0	10299	logfile
✔	7BCT	12143	2021-11-03	2020-12-21	3.37	3.33	3.31	3.4	0.009	1.15	0.0	0.15	13.35	0.01	2.299	4.43	0.00	5.7	94.3	0.0	-0.74	0.51	0.67	2.81	3.4	0.003	0.77	0.0	0.16	14.92	0.00	2.029	11.20	0.58	5.2	94.8	0.0	1.18	1.35	0.55	0.73	2.53	20091	1326	3	0	0	0	10299	logfile
✔	7LN0	23444	2021-11-05	2021-02-06	2.98	3.50	3.07	2.9	0.003	0.64	0.0	0.04	13.02	0.01	2.018	11.99	0.03	1.8	98.2	0.0	0.89	0.80	0.74	2.17	3.0	0.003	0.61	0.0	0.04	14.75	0.00	1.937	11.36	1.02	2.5	97.4	0.0	1.63	0.64	0.88	0.85	2.11	34983	4425	13	0	28	0	0	logfile
✔	7EW3	31346	2021-11-01	2021-05-24	3.1	3.34	—	3.4	0.004	0.49	0.0	0.04	14.15	0.00	2.274	4.63	0.00	1.4	98.6	0.0	1.36	0.66	0.76	2.23	3.4	0.003	0.55	0.0	0.04	15.52	0.00	2.092	4.74	0.20	2.5	97.5	0.0	1.19	1.37	0.65	0.78	2.85	9072	1149	6	0	5	0	0	logfile
✔	7RLA	24523	2021-11-05	2021-07-23	3.1	3.89	—	3.4	0.003	0.78	0.0	0.05	13.59	0.00	2.035	10.00	0.03	7.5	92.5	0.0	-1.72	0.79	0.79	1.20	3.3	0.005	0.67	0.0	0.05	15.13	0.00	1.924	10.57	0.13	6.0	94.0	0.0	-0.26	1.73	0.82	0.84	1.46	34944	4422	12	0	24	0	0	logfile
✔	7PEA	13350	2021-11-02	2021-08-09	4.07	4.50	—	4.2	0.002	0.48	0.0	0.14	14.28	0.00	2.239	3.97	4.24	4.7	95.3	0.0	-2.53	0.84	0.72	—	4.2	0.003	0.64	0.0	0.04	13.42	0.00	2.105	11.14	0.02	3.2	96.8	0.0	0.83	1.55	0.86	0.78	—	58252	7222	10	0	114	0	0	logfile
✔	7RL7	24519	2021-11-05	2021-07-23	3.0	3.48	—	3.0	0.003	0.68	0.0	0.04	15.41	0.00	2.057	11.36	0.00	6.2	93.8	0.0	-1.11	0.85	0.82	2.05	3.0	0.006	0.69	0.0	0.05	16.02	0.00	1.905	11.30	1.49	6.3	93.7	0.0	-0.17	0.53	0.88	0.87	2.41	34950	4422	12	0	24	0	0	logfile
✔	7RLG	24529	2021-11-05	2021-07-23	3.7	3.79	—	3.5	0.003	0.73	0.0	0.05	13.67	0.00	2.261	10.57	0.16	4.6	95.4	0.0	-1.35	0.85	0.79	1.10	3.5	0.003	0.64	0.0	0.04	14.84	0.00	2.159	11.40	0.08	4.4	95.6	0.0	-0.03	1.50	0.89	0.86	1.38	34860	4410	12	0	12	0	0	logfile
✔	7F56	31459	2021-11-04	2021-06-21	4.1	4.62	—	3.9	0.008	1.11	3.0	0.10	13.38	0.01	1.831	27.45	0.50	10.6	89.4	0.0	-2.66	0.78	0.78	—	3.9	0.005	0.72	0.0	0.04	13.44	0.00	2.116	17.60	0.00	7.0	93.0	0.0	-0.47	0.70	0.79	0.83	—	27834	3468	13	0	28	0	0	logfile
✔	7L2i	23129	2021-11-02	2020-12-17	3.7	3.97	3.73	3.9	0.012	0.90	0.0	0.20	12.59	0.01	2.137	2.01	0.75	7.8	92.2	0.0	-0.84	0.59	0.80	1.50	3.9	0.010	0.95	0.0	0.04	15.87	0.01	1.710	14.24	0.32	7.3	92.7	0.0	-0.33	1.84	0.58	0.81	0.71	17432	2124	8	0	4	0	0	logfile
✔	7MKi	23895	2021-11-04	2021-04-23	3.5	3.43	3.54	3.5	0.019	0.77	0.0	0.06	16.91	0.00	2.170	6.42	5.35	7.1	92.8	0.0	-1.84	0.68	0.80	2.21	3.5	0.004	0.66	0.0	0.04	17.13	0.00	1.953	9.39	0.03	6.4	93.6	0.0	-1.40	0.22	0.70	0.81	1.92	30919	3676	10	96	6	0	0	logfile
✔	7F57	31460	2021-11-04	2021-06-21	3.8	4.25	—	4.0	0.007	0.98	3.0	0.10	13.26	0.02	2.061	17.11	0.60	8.4	91.6	0.0	-2.23	0.74	0.82	1.65	4.0	0.009	0.88	1.0	0.04	15.21	0.00	2.140	13.84	0.33	6.8	93.1	0.0	-0.77	1.44	0.75	0.83	1.53	27863	3468	15	0	29	0	0	logfile
✘	7oY8	13110	2021-11-03	2021-06-23	2.5	2.51	—	2.6	0.007	0.85	0.0	0.05	14.49	0.01	1.197	0.65	0.21	2.4	97.6	0.0	0.49	0.72	0.78	2.62	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22902	2293	103	0	68	372	0	logfile
✔	7JZY	22584	2021-11-03	2020-09-02	3.6	3.61	—	3.6	0.009	0.96	0.0	0.05	16.34	0.01	2.236	5.56	0.85	7.0	93.0	0.0	-3.78	0.81	0.85	2.54	3.6	0.006	0.86	0.0	0.04	17.24	0.01	1.710	11.33	0.09	5.6	94.4	0.0	-0.55	0.52	0.81	0.84	1.93	24539	3024	12	61	0	0	0	logfile
✔	7L2V	23142	2021-11-02	2020-12-17	3.64	3.90	3.61	3.7	0.036	1.10	0.0	0.23	11.11	0.01	2.056	3.03	0.37	4.2	95.8	0.0	0.76	0.64	0.83	2.49	3.8	0.009	1.19	0.0	0.13	15.06	0.01	1.870	22.04	0.37	5.5	94.5	0.0	0.35	1.19	0.65	0.83	2.40	17594	2144	8	0	6	0	0	logfile

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