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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6NSJ | 0498 | 2023-04-21 | 2019-01-24 | 2.7 | 3.69 | 2.67 | 3.6 | 0.008 | 1.12 | 0.0 | 0.06 | 13.77 | 0.01 | 2.340 | 8.25 | 2.18 | 6.0 | 94.0 | 0.0 | -4.40 | 0.61 | 0.75 | 5.00 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 14.04 | 0.00 | 2.234 | 5.27 | 1.09 | 4.0 | 96.0 | 0.0 | 2.26 | 0.53 | 0.58 | 0.75 | 2.91 | 9096 | 1092 | 12 | 0 | 18 | 0 | 0 | logfile |
✔ | 6VK1 | 21223 | 2023-04-20 | 2020-01-18 | 3.9 | 3.99 | — | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 14.77 | 0.00 | 2.245 | 10.65 | 0.13 | 4.4 | 95.6 | 0.0 | -1.86 | 0.62 | 0.79 | 1.42 | 3.9 | 0.004 | 0.86 | 0.0 | 0.05 | 17.33 | 0.00 | 2.192 | 13.21 | 0.63 | 4.2 | 95.8 | 0.0 | 1.78 | 1.59 | 0.62 | 0.79 | 1.17 | 7259 | 882 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LLE | 0912 | 2023-04-20 | 2019-12-23 | 2.9 | 3.06 | 2.85 | 3.0 | 0.005 | 0.63 | 0.0 | 0.04 | 12.59 | 0.00 | 2.050 | 6.54 | 0.00 | 2.7 | 97.3 | 0.0 | -1.87 | 0.67 | 0.82 | 3.28 | 3.0 | 0.002 | 0.56 | 0.0 | 0.04 | 16.67 | 0.00 | 2.092 | 7.67 | 1.95 | 2.1 | 97.9 | 0.0 | 0.63 | 0.45 | 0.68 | 0.84 | 2.79 | 7916 | 1020 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6QSU | 4629 | 2023-04-28 | 2019-02-22 | 2.4 | 2.64 | 2.56 | 2.6 | 0.006 | 0.65 | 0.0 | 0.05 | 13.44 | 0.00 | 1.918 | 4.58 | 0.61 | 4.6 | 95.4 | 0.0 | 0.27 | 0.81 | 0.87 | 4.68 | 2.6 | 0.002 | 0.53 | 0.0 | 0.04 | 16.49 | 0.00 | 1.940 | 5.87 | 0.67 | 3.1 | 96.9 | 0.0 | 0.36 | 1.15 | 0.72 | 0.86 | 4.21 | 75758 | 9684 | 60 | 0 | 36 | 1178 | 0 | logfile |
✔ | 7RYZ | 24749 | 2023-04-23 | 2021-08-26 | 4.15 | 3.50 | — | 3.4 | 0.008 | 0.95 | 0.0 | 0.05 | 10.77 | 0.01 | 2.225 | 4.30 | 0.24 | 3.4 | 96.6 | 0.0 | -4.55 | 0.73 | 0.77 | — | 3.4 | 0.003 | 0.63 | 0.0 | 0.04 | 12.87 | 0.00 | 2.101 | 10.82 | 0.00 | 2.9 | 97.1 | 0.0 | 0.12 | 1.91 | 0.74 | 0.77 | — | 15742 | 2014 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7TFo | 25878 | 2023-04-29 | 2022-01-06 | 4.1 | 3.83 | — | 3.8 | 0.006 | 0.74 | 0.0 | 0.05 | 13.26 | 0.01 | 2.118 | 16.68 | 0.21 | 8.9 | 91.1 | 0.0 | -1.50 | 0.74 | 0.73 | — | 3.7 | 0.004 | 0.68 | 0.0 | 0.05 | 13.52 | 0.00 | 2.114 | 14.42 | 0.00 | 8.1 | 91.8 | 0.0 | -1.20 | 0.73 | 0.74 | 0.76 | — | 17774 | 2283 | 20 | 0 | 21 | 0 | 0 | logfile |
✔ | 7WUS | 32840 | 2023-04-20 | 2022-02-09 | 3.4 | 3.78 | — | 3.8 | 0.003 | 0.75 | 0.0 | 0.05 | 17.11 | 0.00 | 2.275 | 11.90 | 1.00 | 8.6 | 91.4 | 0.0 | -2.40 | 0.69 | 0.74 | 1.76 | 3.7 | 0.003 | 0.80 | 0.0 | 0.05 | 17.38 | 0.00 | 2.113 | 12.74 | 0.50 | 8.3 | 91.6 | 0.1 | -1.93 | 1.46 | 0.70 | 0.77 | 1.35 | 5450 | 682 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SEF | 10154 | 2023-04-22 | 2019-07-29 | 3.7 | 4.25 | — | 3.6 | 0.007 | 0.85 | 0.0 | 0.05 | 27.92 | 0.00 | 2.225 | 4.94 | 0.00 | 2.7 | 97.3 | 0.0 | -2.10 | 0.88 | 0.84 | 2.28 | 3.5 | 0.005 | 0.76 | 0.0 | 0.04 | 28.99 | 0.00 | 2.071 | 16.74 | 0.80 | 2.9 | 97.1 | 0.0 | 0.58 | 0.72 | 0.89 | 0.85 | 1.99 | 11919 | 751 | 11 | 290 | 0 | 0 | 0 | logfile |
✔ | 7F8J | 31489 | 2023-04-24 | 2021-07-02 | 3.6 | 3.73 | 3.52 | 3.7 | 0.010 | 1.62 | 0.0 | 0.04 | 18.33 | 0.00 | 2.215 | 7.08 | 1.04 | 5.8 | 94.2 | 0.0 | 0.64 | 0.63 | 0.84 | 2.72 | 3.7 | 0.003 | 1.42 | 0.0 | 0.04 | 15.04 | 0.00 | 2.219 | 8.57 | 0.20 | 5.7 | 94.3 | 0.0 | 1.22 | 1.22 | 0.61 | 0.85 | 2.70 | 18984 | 2240 | 14 | 0 | 42 | 0 | 0 | logfile |
✔ | 7PDH | 13338 | 2023-04-20 | 2021-08-05 | 4.0 | 3.51 | — | 3.2 | 0.003 | 0.70 | 0.0 | 0.04 | 14.16 | 0.00 | 2.169 | 14.32 | 0.00 | 5.8 | 94.2 | 0.0 | -1.07 | 0.79 | 0.69 | — | 3.2 | 0.003 | 0.70 | 0.0 | 0.04 | 16.46 | 0.00 | 2.175 | 14.77 | 0.62 | 6.3 | 93.7 | 0.0 | -0.65 | 0.53 | 0.79 | 0.70 | — | 4516 | 577 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TNJ | 26011 | 2023-04-24 | 2022-01-21 | 4.02 | 3.16 | — | 3.3 | 0.005 | 0.94 | 0.0 | 0.05 | 10.53 | 0.01 | 2.246 | 3.87 | 0.20 | 3.6 | 96.4 | 0.0 | -4.89 | 0.65 | 0.72 | — | 3.1 | 0.003 | 0.64 | 0.0 | 0.04 | 13.18 | 0.00 | 2.184 | 10.71 | 0.05 | 3.2 | 96.8 | 0.0 | 0.63 | 1.32 | 0.66 | 0.73 | — | 18810 | 2402 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7AAP | 11692 | 2023-04-21 | 2020-09-04 | 2.5 | 2.71 | 2.48 | 2.8 | 0.006 | 0.53 | 0.0 | 0.04 | 12.42 | 0.00 | 2.097 | 3.69 | 0.20 | 1.5 | 98.5 | 0.0 | 0.59 | 0.79 | 0.87 | 4.74 | 2.7 | 0.003 | 0.53 | 0.0 | 0.04 | 14.64 | 0.00 | 2.166 | 5.69 | 0.71 | 1.8 | 98.2 | 0.0 | 0.36 | 0.82 | 0.80 | 0.90 | 4.24 | 9446 | 1120 | 9 | 21 | 7 | 0 | 0 | logfile |
✔ | 7Sii | 25142 | 2023-04-25 | 2021-10-14 | 3.45 | 3.63 | — | 3.6 | 0.008 | 0.74 | 0.0 | 0.03 | 13.14 | 0.00 | 2.220 | 5.25 | 2.21 | 2.9 | 97.1 | 0.0 | 2.94 | 0.64 | 0.79 | 2.61 | 3.6 | 0.004 | 0.55 | 0.0 | 0.03 | 15.31 | 0.00 | 2.106 | 7.44 | 0.46 | 3.0 | 97.0 | 0.0 | 2.33 | 0.51 | 0.66 | 0.83 | 1.88 | 20484 | 1286 | 8 | 0 | 4 | 0 | 10184 | logfile |
✔ | 7W4Q | 32312 | 2023-04-23 | 2021-11-28 | 3.3 | 3.35 | — | 3.3 | 0.006 | 0.78 | 1.0 | 0.04 | 17.60 | 0.01 | 2.115 | 9.03 | 0.36 | 4.0 | 96.0 | 0.0 | 0.93 | 0.78 | 0.86 | 2.38 | 3.3 | 0.004 | 0.60 | 0.0 | 0.04 | 17.20 | 0.00 | 2.100 | 8.81 | 0.37 | 4.4 | 95.6 | 0.0 | 0.75 | 0.33 | 0.79 | 0.87 | 2.44 | 66581 | 8140 | 66 | 0 | 37 | 0 | 0 | logfile |
✔ | 7USE | 26734 | 2023-04-26 | 2022-04-25 | 3.0 | 3.34 | 2.99 | 3.3 | 0.005 | 0.79 | 0.0 | 0.05 | 13.68 | 0.00 | 1.840 | 6.47 | 0.19 | 1.5 | 98.5 | 0.0 | 3.40 | 0.87 | 0.78 | 2.35 | 3.2 | 0.004 | 0.80 | 0.0 | 0.04 | 16.74 | 0.00 | 1.950 | 9.91 | 1.13 | 2.3 | 97.7 | 0.0 | 1.79 | 2.27 | 0.87 | 0.84 | 1.78 | 23913 | 2954 | 9 | 0 | 4 | 0 | 0 | logfile |
✘ | 6RKV | 4912 | 2023-04-23 | 2019-04-30 | 4.6 | 4.86 | — | 4.5 | 0.002 | 0.53 | 0.0 | 0.04 | 12.80 | 0.00 | 2.207 | 7.23 | 0.00 | 5.3 | 94.7 | 0.0 | -1.73 | 0.87 | 0.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15460 | 1784 | 8 | 64 | 0 | 0 | 0 | logfile |
✔ | 7YHQ | 33836 | 2023-04-20 | 2022-07-14 | 3.9 | 3.34 | 3.84 | 3.3 | 0.005 | 0.91 | 0.0 | 0.06 | 23.63 | 0.01 | 2.249 | 15.40 | 2.00 | 8.6 | 91.4 | 0.0 | -0.58 | 0.74 | 0.72 | 0.99 | 3.2 | 0.003 | 0.69 | 0.0 | 0.04 | 23.59 | 0.00 | 2.143 | 16.30 | 0.86 | 9.1 | 90.9 | 0.0 | -0.74 | 0.65 | 0.74 | 0.74 | 0.99 | 4065 | 393 | 4 | 42 | 2 | 0 | 0 | logfile |
✔ | 6SEE | 10153 | 2023-04-22 | 2019-07-29 | 4.2 | 4.47 | — | 4.1 | 0.008 | 0.94 | 0.0 | 0.05 | 27.63 | 0.01 | 2.252 | 4.46 | 0.00 | 3.0 | 97.0 | 0.0 | -1.74 | 0.87 | 0.83 | — | 4.1 | 0.004 | 0.70 | 0.0 | 0.04 | 28.16 | 0.00 | 2.048 | 16.59 | 0.00 | 2.4 | 97.6 | 0.0 | 0.56 | 0.74 | 0.87 | 0.83 | — | 11949 | 756 | 11 | 290 | 0 | 0 | 0 | logfile |
✔ | 6PM3 | 20385 | 2023-04-23 | 2019-07-01 | 3.0 | 3.08 | — | 3.0 | 0.009 | 1.06 | 0.0 | 0.06 | 9.20 | 0.01 | 2.322 | 4.53 | 0.00 | 5.0 | 95.0 | 0.0 | -4.50 | 0.71 | 0.88 | 4.96 | 3.0 | 0.002 | 0.61 | 0.0 | 0.04 | 15.57 | 0.00 | 2.165 | 9.02 | 2.02 | 3.9 | 96.1 | 0.0 | 0.70 | 0.71 | 0.72 | 0.91 | 4.27 | 14120 | 1725 | 15 | 0 | 15 | 0 | 0 | logfile |
✔ | 7U2B | 26311 | 2023-04-20 | 2022-02-23 | 4.1 | 4.26 | — | 4.2 | 0.009 | 0.96 | 0.0 | 0.05 | 14.98 | 0.00 | 1.936 | 7.07 | 0.15 | 0.1 | 99.9 | 0.0 | 2.20 | 0.72 | 0.71 | — | 4.2 | 0.003 | 0.62 | 0.0 | 0.04 | 15.43 | 0.00 | 2.153 | 10.28 | 0.00 | 1.8 | 98.2 | 0.0 | 0.53 | 1.44 | 0.78 | 0.80 | — | 7316 | 780 | 5 | 53 | 2 | 0 | 0 | logfile |