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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7RCV | 24407 | 2023-11-14 | 2021-07-08 | 2.01 | 1.78 | — | 1.9 | 0.024 | 2.38 | 0.0 | 0.11 | 20.31 | 0.01 | 1.915 | 13.94 | 1.99 | 2.6 | 97.4 | 0.0 | 0.92 | 0.78 | 0.79 | 5.10 | 1.9 | 0.007 | 0.98 | 0.0 | 0.06 | 19.24 | 0.01 | 1.984 | 13.17 | 1.79 | 3.0 | 97.0 | 0.0 | 0.41 | 0.91 | 0.81 | 0.84 | 5.30 | 54656 | 5544 | 114 | 0 | 228 | 1236 | 0 | logfile |
✔ | 8Q27 | 18070 | 2023-11-14 | 2023-08-01 | 2.02 | 1.98 | 1.92 | 2.0 | 0.011 | 1.74 | 0.0 | 0.08 | 11.92 | 0.01 | 2.517 | 0.00 | 1.27 | 2.3 | 97.7 | 0.0 | -1.63 | 0.21 | 0.69 | 8.02 | 2.0 | 0.002 | 0.54 | 0.0 | 0.05 | 17.00 | 0.00 | 2.208 | 1.57 | 0.51 | 2.5 | 97.5 | 0.0 | -1.37 | 1.20 | 0.34 | 0.88 | 7.21 | 7002 | 453 | 6 | 0 | 0 | 0 | 3567 | logfile |
✘ | 7F4V | 31455 | 2023-11-16 | 2021-06-21 | 2.04 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 67641 | 6336 | 78 | 0 | 453 | 402 | 0 | logfile |
✔ | 7o6P | 12739 | 2023-11-14 | 2021-04-12 | 2.04 | 2.55 | — | 2.1 | 0.008 | 0.59 | 0.0 | 0.05 | 11.73 | 0.00 | 2.140 | 6.08 | 0.93 | 1.8 | 98.2 | 0.0 | -0.54 | 0.90 | 0.88 | 5.90 | 2.1 | 0.002 | 0.47 | 0.0 | 0.04 | 13.52 | 0.00 | 2.251 | 5.96 | 0.00 | 2.0 | 98.0 | 0.0 | 2.22 | 0.39 | 0.90 | 0.92 | 5.36 | 8276 | 1022 | 8 | 0 | 0 | 268 | 0 | logfile |
✘ | 8CRS | 26957 | 2023-11-17 | 2022-05-11 | 2.04 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17888 | 1998 | 12 | 0 | 12 | 1692 | 0 | logfile |
✔ | 8GHE | 40042 | 2023-11-18 | 2023-03-09 | 2.05 | 2.65 | 2.15 | 2.5 | 0.006 | 0.73 | 0.0 | 0.05 | 12.12 | 0.01 | 2.229 | 4.10 | 0.04 | 1.7 | 98.3 | 0.0 | -0.85 | 0.83 | 0.91 | 5.79 | 2.4 | 0.003 | 0.58 | 0.0 | 0.04 | 14.50 | 0.00 | 2.155 | 9.80 | 0.92 | 1.4 | 98.6 | 0.0 | 1.63 | 0.46 | 0.82 | 0.91 | 5.44 | 22193 | 2648 | 12 | 0 | 5 | 830 | 0 | logfile |
✔ | 8E49 | 27884 | 2023-11-15 | 2022-08-17 | 2.05 | 2.78 | 2.50 | 2.5 | 0.005 | 0.42 | 0.0 | 0.03 | 12.76 | 0.02 | 1.945 | 1.31 | 0.85 | 4.6 | 95.4 | 0.0 | 0.91 | 0.71 | 0.91 | 5.79 | 2.6 | 0.005 | 0.60 | 0.0 | 0.04 | 13.62 | 0.01 | 1.890 | 2.36 | 1.17 | 5.2 | 94.8 | 0.1 | 0.08 | 0.21 | 0.70 | 0.92 | 5.87 | 115871 | 1179 | 11 | 3016 | 1 | 0 | 41885 | logfile |
✔ | 8F6A | 28878 | 2023-11-21 | 2022-11-16 | 2.06 | 3.05 | 2.14 | 2.7 | 0.004 | 0.69 | 0.0 | 0.05 | 17.55 | 0.01 | 2.320 | 4.08 | 3.21 | 3.1 | 96.9 | 0.0 | 1.20 | 0.80 | 0.76 | 4.28 | 2.7 | 0.004 | 0.54 | 0.0 | 0.04 | 16.39 | 0.00 | 2.057 | 2.38 | 0.63 | 3.6 | 96.4 | 0.0 | 1.60 | 0.85 | 0.81 | 0.91 | 4.52 | 93058 | 5950 | 28 | 0 | 0 | 0 | 47110 | logfile |
✘ | 7oY2 | 13108 | 2023-11-14 | 2021-06-23 | 2.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7166 | 858 | 7 | 0 | 7 | 24 | 0 | logfile |
✔ | 8CA7 | 16520 | 2023-11-17 | 2023-01-24 | 2.06 | 1.61 | 1.93 | 1.9 | 0.012 | 1.53 | 0.0 | 0.14 | 14.84 | 0.03 | 1.726 | 0.60 | 0.71 | 3.0 | 96.8 | 0.1 | -1.46 | 0.62 | 0.75 | 4.98 | 1.9 | 0.004 | 0.78 | 0.0 | 0.05 | 15.37 | 0.01 | 1.755 | 8.56 | 1.56 | 2.2 | 97.7 | 0.1 | 1.22 | 0.46 | 0.68 | 0.78 | 4.87 | 18093 | 848 | 19 | 502 | 42 | 543 | 0 | logfile |
✔ | 8E2D | 27832 | 2023-11-15 | 2022-08-15 | 2.07 | 2.27 | 2.16 | 2.3 | 0.003 | 0.56 | 0.0 | 0.04 | 15.75 | 0.00 | 1.968 | 6.49 | 0.85 | 2.0 | 98.0 | 0.0 | 1.44 | 0.63 | 0.82 | 4.02 | 2.3 | 0.003 | 0.53 | 0.0 | 0.04 | 15.83 | 0.00 | 1.974 | 6.71 | 1.02 | 2.3 | 97.7 | 0.0 | 1.97 | 0.39 | 0.64 | 0.83 | 3.91 | 62460 | 3936 | 2 | 0 | 0 | 0 | 31562 | logfile |
✔ | 8P5V | 17454 | 2023-11-13 | 2023-05-24 | 2.07 | 2.90 | 2.14 | 2.5 | 0.009 | 1.09 | 0.0 | 0.06 | 14.19 | 0.02 | 2.018 | 1.82 | 0.53 | 2.7 | 97.3 | 0.0 | 0.06 | 0.90 | 0.95 | 6.07 | 2.6 | 0.003 | 0.64 | 0.0 | 0.04 | 14.85 | 0.00 | 1.913 | 3.53 | 0.58 | 2.0 | 98.0 | 0.0 | 1.33 | 0.88 | 0.86 | 0.93 | 5.49 | 54248 | 6726 | 18 | 0 | 24 | 1280 | 0 | logfile |
✔ | 7QKL | 14046 | 2023-11-13 | 2021-12-17 | 2.07 | 2.04 | 1.98 | 2.0 | 0.011 | 2.37 | 0.0 | 0.25 | 12.79 | 0.01 | 2.537 | 0.14 | 0.00 | 3.6 | 96.4 | 0.0 | -1.75 | 0.40 | 0.83 | 7.75 | 2.0 | 0.003 | 0.62 | 0.0 | 0.05 | 17.01 | 0.00 | 2.552 | 3.25 | 0.25 | 2.7 | 97.3 | 0.0 | -1.29 | 2.03 | 0.44 | 0.91 | 7.62 | 3468 | 456 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8D1G | 27129 | 2023-11-16 | 2022-05-27 | 2.07 | 2.29 | 2.10 | 2.3 | 0.006 | 0.69 | 0.0 | 0.04 | 19.81 | 0.00 | 2.207 | 13.54 | 0.66 | 1.2 | 98.8 | 0.0 | 1.81 | 0.74 | 0.85 | 5.81 | 2.3 | 0.006 | 0.68 | 0.0 | 0.05 | 17.43 | 0.01 | 2.142 | 7.81 | 0.52 | 1.3 | 98.7 | 0.0 | 1.57 | 0.91 | 0.71 | 0.86 | 5.67 | 16201 | 1735 | 15 | 0 | 61 | 620 | 0 | logfile |
✔ | 7KJR | 22898 | 2023-11-13 | 2020-10-26 | 2.08 | 2.52 | 2.15 | 2.4 | 0.006 | 0.84 | 0.0 | 0.05 | 16.31 | 0.00 | 2.254 | 7.60 | 0.25 | 1.8 | 98.2 | 0.0 | 1.13 | 0.68 | 0.87 | 5.29 | 2.4 | 0.003 | 0.53 | 0.0 | 0.04 | 16.24 | 0.00 | 2.088 | 9.90 | 0.99 | 2.1 | 97.9 | 0.0 | 1.24 | 0.40 | 0.66 | 0.87 | 4.76 | 3840 | 448 | 8 | 0 | 2 | 122 | 0 | logfile |
✔ | 8iJX | 35502 | 2023-11-15 | 2023-02-28 | 2.08 | 2.24 | 2.11 | 2.3 | 0.007 | 0.93 | 0.0 | 0.05 | 15.21 | 0.01 | 2.024 | 5.04 | 1.50 | 1.7 | 98.3 | 0.0 | 1.40 | 0.64 | 0.84 | 6.06 | 2.3 | 0.004 | 0.64 | 0.0 | 0.05 | 17.04 | 0.01 | 1.969 | 5.14 | 1.69 | 1.8 | 98.2 | 0.0 | 1.05 | 0.80 | 0.69 | 0.87 | 5.82 | 10545 | 1251 | 6 | 0 | 12 | 373 | 0 | logfile |
✔ | 7ZYL | 15026 | 2023-11-13 | 2022-05-25 | 2.08 | 2.56 | 2.12 | 2.4 | 0.010 | 0.62 | 0.0 | 0.05 | 18.82 | 0.00 | 2.104 | 14.15 | 0.00 | 0.8 | 99.2 | 0.0 | 0.55 | 0.77 | 0.89 | 6.49 | 2.4 | 0.004 | 0.70 | 0.0 | 0.05 | 19.02 | 0.00 | 2.270 | 6.95 | 1.43 | 0.8 | 99.2 | 0.0 | 0.39 | 0.29 | 0.79 | 0.91 | 6.52 | 3992 | 484 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 7RZQ | 24774 | 2023-11-13 | 2021-08-27 | 2.09 | 2.26 | — | 2.7 | 0.006 | 0.40 | 0.0 | 0.03 | 14.23 | 0.00 | 2.339 | 4.69 | 0.00 | 1.9 | 98.1 | 0.0 | 2.15 | 0.78 | 0.79 | 1.56 | 2.0 | 0.003 | 0.31 | 0.0 | 0.03 | 15.07 | 0.00 | 2.343 | 5.71 | 0.00 | 0.0 | 100.0 | 0.0 | 5.84 | 0.30 | 0.82 | 0.82 | 2.01 | 2421 | 322 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E43 | 27878 | 2023-11-15 | 2022-08-17 | 2.09 | 2.88 | 2.49 | 2.6 | 0.006 | 0.57 | 0.0 | 0.03 | 12.79 | 0.02 | 1.945 | 2.00 | 1.06 | 4.9 | 94.8 | 0.3 | -2.82 | 0.73 | 0.90 | 5.55 | 2.6 | 0.005 | 0.58 | 0.0 | 0.04 | 13.92 | 0.01 | 1.922 | 3.36 | 1.38 | 5.8 | 93.8 | 0.3 | -0.17 | 0.38 | 0.72 | 0.90 | 5.17 | 115905 | 1179 | 11 | 3015 | 1 | 0 | 41874 | logfile |
✔ | 8G6Y | 29788 | 2023-11-21 | 2023-02-16 | 2.09 | 1.85 | 2.01 | 1.9 | 0.007 | 0.89 | 0.0 | 0.05 | 14.74 | 0.03 | 1.446 | 5.72 | 3.72 | 3.5 | 96.3 | 0.2 | -1.60 | 0.73 | 0.86 | 6.08 | 2.0 | 0.006 | 0.90 | 0.0 | 0.04 | 14.99 | 0.01 | 1.690 | 5.64 | 2.72 | 3.7 | 96.2 | 0.1 | -0.27 | 1.19 | 0.73 | 0.89 | 5.97 | 93683 | 3175 | 69 | 3037 | 250 | 3460 | 0 | logfile |