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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ZYY | 15028 | 2023-08-22 | 2022-05-25 | 2.12 | 2.40 | 2.14 | 2.1 | 0.007 | 0.89 | 0.0 | 0.05 | 17.24 | 0.00 | 2.008 | 4.42 | 1.19 | 2.4 | 97.6 | 0.0 | -0.65 | 0.91 | 0.89 | 4.75 | 2.1 | 0.003 | 0.57 | 0.0 | 0.04 | 17.11 | 0.00 | 1.934 | 7.74 | 1.47 | 2.5 | 97.5 | 0.0 | 0.40 | 1.08 | 0.91 | 0.89 | 4.79 | 33924 | 4224 | 12 | 0 | 28 | 324 | 0 | logfile |
✔ | 7XY9 | 33514 | 2023-08-12 | 2022-06-01 | 2.12 | 2.29 | 2.22 | 2.3 | 0.002 | 0.54 | 0.0 | 0.05 | 17.43 | 0.00 | 1.988 | 4.59 | 1.67 | 4.0 | 96.0 | 0.0 | 0.43 | 0.78 | 0.88 | 5.01 | 2.3 | 0.004 | 0.67 | 0.0 | 0.05 | 17.41 | 0.01 | 1.873 | 5.07 | 1.95 | 4.2 | 95.8 | 0.0 | -0.09 | 0.16 | 0.75 | 0.87 | 5.58 | 10962 | 1376 | 12 | 0 | 12 | 574 | 0 | logfile |
✔ | 7JFo | 22308 | 2023-08-24 | 2020-07-17 | 2.13 | 2.12 | — | 2.1 | 0.022 | 1.67 | 2.0 | 0.11 | 12.07 | 0.01 | 2.198 | 6.71 | 1.23 | 3.9 | 96.1 | 0.0 | -0.96 | 0.72 | 0.78 | 6.96 | 2.1 | 0.003 | 0.66 | 0.0 | 0.05 | 14.53 | 0.01 | 2.219 | 7.32 | 1.08 | 2.6 | 97.4 | 0.0 | 1.20 | 0.78 | 0.71 | 0.82 | 5.81 | 38958 | 4832 | 40 | 0 | 0 | 1198 | 0 | logfile |
✔ | 7TF7 | 25864 | 2023-08-24 | 2022-01-06 | 2.13 | 2.24 | — | 2.2 | 0.004 | 0.61 | 0.0 | 0.04 | 15.42 | 0.00 | 2.187 | 5.57 | 1.43 | 2.5 | 97.4 | 0.1 | 1.01 | 0.47 | 0.70 | 5.40 | 2.3 | 0.002 | 0.51 | 0.0 | 0.04 | 16.42 | 0.00 | 2.224 | 4.84 | 1.96 | 3.2 | 96.8 | 0.0 | 1.42 | 0.49 | 0.71 | 0.87 | 5.84 | 39976 | 4980 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E41 | 27876 | 2023-08-13 | 2022-08-17 | 2.13 | 2.86 | 2.57 | 2.6 | 0.005 | 0.38 | 1.0 | 0.02 | 12.72 | 0.02 | 1.983 | 1.89 | 0.85 | 5.2 | 94.8 | 0.0 | 0.82 | 0.73 | 0.90 | 5.26 | 2.6 | 0.005 | 0.58 | 1.0 | 0.04 | 13.77 | 0.01 | 1.985 | 3.39 | 1.17 | 5.5 | 94.4 | 0.1 | 0.23 | 0.24 | 0.73 | 0.91 | 5.26 | 115744 | 1186 | 12 | 3016 | 1 | 0 | 41833 | logfile |
✔ | 7ZYV | 15027 | 2023-08-14 | 2022-05-25 | 2.13 | 2.84 | 2.17 | 2.6 | 0.007 | 0.70 | 0.0 | 0.05 | 18.57 | 0.01 | 1.927 | 11.83 | 2.20 | 3.9 | 96.1 | 0.0 | 0.99 | 0.78 | 0.90 | 3.60 | 2.6 | 0.003 | 0.59 | 0.0 | 0.04 | 17.78 | 0.00 | 2.186 | 3.85 | 2.08 | 3.4 | 96.6 | 0.0 | 1.50 | 0.39 | 0.77 | 0.90 | 2.95 | 16452 | 1946 | 29 | 0 | 32 | 0 | 0 | logfile |
✔ | 7S4H | 24826 | 2023-08-26 | 2021-09-08 | 2.14 | 2.27 | — | 2.3 | 0.009 | 1.03 | 3.0 | 0.05 | 19.43 | 0.00 | 1.502 | 14.45 | 2.83 | 4.8 | 94.9 | 0.2 | 0.71 | 0.77 | 0.85 | 4.94 | 2.2 | 0.006 | 0.71 | 0.0 | 0.05 | 18.54 | 0.01 | 1.942 | 8.72 | 2.38 | 4.9 | 94.7 | 0.4 | 0.75 | 0.58 | 0.81 | 0.92 | 5.18 | 22889 | 2577 | 27 | 0 | 63 | 410 | 0 | logfile |
✔ | 8DR1 | 27668 | 2023-08-25 | 2022-07-20 | 2.14 | 2.91 | 2.21 | 2.7 | 0.008 | 0.57 | 0.0 | 0.04 | 17.93 | 0.00 | 1.946 | 2.66 | 0.74 | 1.4 | 98.6 | 0.0 | 1.79 | 0.80 | 0.77 | 4.33 | 2.7 | 0.003 | 0.52 | 0.0 | 0.04 | 17.82 | 0.00 | 1.751 | 3.00 | 1.21 | 1.2 | 98.8 | 0.0 | 2.09 | 1.05 | 0.77 | 0.87 | 4.59 | 43630 | 2608 | 21 | 64 | 8 | 12 | 21631 | logfile |
✔ | 7RTB | 24680 | 2023-08-11 | 2021-08-12 | 2.14 | 2.32 | 2.23 | 2.3 | 0.003 | 0.57 | 0.0 | 0.04 | 14.48 | 0.00 | 2.277 | 5.37 | 0.77 | 1.6 | 98.4 | 0.0 | -0.80 | 0.64 | 0.69 | 3.38 | 2.3 | 0.003 | 0.59 | 0.0 | 0.04 | 17.07 | 0.00 | 2.260 | 5.43 | 2.77 | 2.7 | 97.3 | 0.0 | 1.12 | 0.68 | 0.68 | 0.82 | 3.99 | 8972 | 1169 | 7 | 0 | 0 | 1 | 0 | logfile |
✘ | 8ENM | 28273 | 2023-08-15 | 2022-09-30 | 2.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17722 | 1999 | 12 | 0 | 8 | 1693 | 0 | logfile |
✔ | 7R4X | 14317 | 2023-08-19 | 2022-02-09 | 2.15 | 1.94 | — | 2.1 | 0.012 | 1.13 | 0.0 | 0.06 | 16.98 | 0.04 | 1.443 | 4.90 | 4.12 | 3.8 | 96.2 | 0.1 | -0.66 | 0.70 | 0.73 | 4.07 | 2.0 | 0.005 | 1.06 | 0.0 | 0.04 | 17.40 | 0.01 | 1.810 | 12.10 | 2.57 | 3.6 | 96.4 | 0.0 | 0.26 | 0.92 | 0.77 | 0.85 | 4.42 | 77937 | 4792 | 77 | 1646 | 174 | 4117 | 0 | logfile |
✔ | 8A2Z | 15109 | 2023-08-13 | 2022-06-06 | 2.15 | 2.27 | 2.11 | 2.2 | 0.004 | 0.58 | 0.0 | 0.04 | 11.91 | 0.00 | 2.190 | 1.81 | 0.00 | 2.1 | 97.7 | 0.3 | -1.13 | 0.74 | 0.87 | 6.56 | 2.2 | 0.003 | 0.59 | 0.0 | 0.04 | 15.50 | 0.00 | 2.041 | 4.24 | 0.52 | 1.7 | 98.3 | 0.0 | 1.11 | 1.46 | 0.74 | 0.89 | 5.98 | 15060 | 1830 | 15 | 0 | 10 | 570 | 0 | logfile |
✔ | 8A2Y | 15108 | 2023-08-13 | 2022-06-06 | 2.15 | 2.21 | 2.10 | 2.2 | 0.005 | 0.61 | 0.0 | 0.05 | 13.42 | 0.00 | 2.177 | 2.39 | 0.64 | 1.9 | 98.1 | 0.0 | -1.01 | 0.72 | 0.87 | 6.39 | 2.2 | 0.003 | 0.62 | 0.0 | 0.05 | 15.79 | 0.00 | 2.140 | 4.05 | 0.58 | 1.1 | 98.9 | 0.0 | 0.97 | 0.83 | 0.72 | 0.89 | 6.11 | 15078 | 1835 | 15 | 0 | 15 | 528 | 0 | logfile |
✔ | 7ZZ6 | 15036 | 2023-08-10 | 2022-05-25 | 2.15 | 2.39 | 2.12 | 2.1 | 0.006 | 0.68 | 0.0 | 0.04 | 17.30 | 0.00 | 1.385 | 8.71 | 3.48 | 2.9 | 97.1 | 0.0 | 0.64 | 0.91 | 0.90 | 4.87 | 2.1 | 0.004 | 0.61 | 0.0 | 0.04 | 17.09 | 0.00 | 1.999 | 8.27 | 3.14 | 3.0 | 97.0 | 0.0 | 0.69 | 0.24 | 0.93 | 0.92 | 4.82 | 8257 | 1017 | 6 | 0 | 6 | 157 | 0 | logfile |
✔ | 7PK6 | 13466 | 2023-08-14 | 2021-08-25 | 2.15 | 2.27 | 2.23 | 2.3 | 0.005 | 0.60 | 0.0 | 0.05 | 17.06 | 0.01 | 1.864 | 4.25 | 2.22 | 2.0 | 98.0 | 0.0 | 1.43 | 0.73 | 0.77 | 4.80 | 2.2 | 0.003 | 0.55 | 0.0 | 0.04 | 17.46 | 0.00 | 2.152 | 6.42 | 2.12 | 2.2 | 97.8 | 0.0 | 1.53 | 0.87 | 0.78 | 0.88 | 4.85 | 120580 | 15100 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S4J | 24828 | 2023-08-26 | 2021-09-09 | 2.16 | 2.44 | — | 2.5 | 0.009 | 1.07 | 1.0 | 0.05 | 19.63 | 0.00 | 1.948 | 13.88 | 4.30 | 5.2 | 94.3 | 0.5 | 0.65 | 0.75 | 0.84 | 4.80 | 2.4 | 0.002 | 0.59 | 0.0 | 0.04 | 17.26 | 0.00 | 1.987 | 9.16 | 2.70 | 4.5 | 95.3 | 0.2 | 0.80 | 0.36 | 0.77 | 0.90 | 4.57 | 22780 | 2577 | 27 | 0 | 63 | 304 | 0 | logfile |
✔ | 8DLW | 27518 | 2023-08-21 | 2022-07-08 | 2.16 | 3.12 | 2.26 | 2.6 | 0.007 | 1.05 | 0.0 | 0.06 | 11.12 | 0.01 | 2.290 | 1.95 | 0.19 | 2.3 | 97.7 | 0.1 | 0.82 | 0.87 | 0.86 | 4.36 | 2.6 | 0.004 | 0.65 | 0.0 | 0.04 | 13.83 | 0.00 | 2.164 | 6.94 | 1.06 | 2.6 | 97.4 | 0.0 | 0.96 | 2.12 | 0.88 | 0.89 | 4.13 | 30267 | 3768 | 33 | 0 | 78 | 0 | 0 | logfile |
✔ | 6KQK | 0753 | 2023-08-12 | 2019-08-18 | 2.17 | 3.14 | — | 2.8 | 0.018 | 1.17 | 12.0 | 0.06 | 14.73 | 0.00 | 1.876 | 11.30 | 0.00 | 7.4 | 92.6 | 0.0 | -4.38 | 0.82 | 0.84 | 4.45 | 2.8 | 0.003 | 0.73 | 2.0 | 0.12 | 15.49 | 0.00 | 1.782 | 9.69 | 0.69 | 4.1 | 95.9 | 0.0 | 0.23 | 0.79 | 0.82 | 0.86 | 4.20 | 63373 | 3936 | 24 | 0 | 48 | 0 | 31225 | logfile |
✔ | 8io8 | 35611 | 2023-08-12 | 2023-03-10 | 2.17 | 2.85 | 2.44 | 2.5 | 0.006 | 0.67 | 0.0 | 0.05 | 10.89 | 0.00 | 2.008 | 5.86 | 0.08 | 3.4 | 96.6 | 0.0 | 0.23 | 0.70 | 0.91 | 5.90 | 2.5 | 0.002 | 0.47 | 0.0 | 0.04 | 13.54 | 0.00 | 2.024 | 5.01 | 0.68 | 2.9 | 96.9 | 0.1 | 1.12 | 0.40 | 0.70 | 0.91 | 4.71 | 12596 | 1576 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 8A2R | 15104 | 2023-08-13 | 2022-06-06 | 2.17 | 2.31 | 2.13 | 2.2 | 0.005 | 0.67 | 0.0 | 0.04 | 13.67 | 0.00 | 1.880 | 2.75 | 0.65 | 2.5 | 97.5 | 0.0 | -1.52 | 0.72 | 0.86 | 5.94 | 2.2 | 0.002 | 0.57 | 0.0 | 0.04 | 16.82 | 0.00 | 1.938 | 3.48 | 0.90 | 1.4 | 98.6 | 0.0 | 1.29 | 1.70 | 0.73 | 0.90 | 5.61 | 14990 | 1830 | 15 | 0 | 15 | 480 | 0 | logfile |