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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ZZ1 | 15031 | 2023-04-20 | 2022-05-25 | 2.27 | 2.59 | 2.22 | 2.1 | 0.007 | 0.89 | 0.0 | 0.05 | 18.21 | 0.01 | 2.159 | 3.90 | 2.68 | 2.6 | 97.4 | 0.0 | -1.05 | 0.91 | 0.90 | 4.22 | 2.1 | 0.003 | 0.60 | 0.0 | 0.04 | 17.94 | 0.00 | 2.116 | 8.71 | 2.87 | 2.6 | 97.4 | 0.0 | 1.09 | 1.10 | 0.91 | 0.90 | 4.07 | 4958 | 618 | 5 | 0 | 4 | 55 | 0 | logfile |
✔ | 7R06 | 14220 | 2023-04-22 | 2022-02-01 | 2.27 | 2.36 | 2.34 | 2.3 | 0.007 | 0.85 | 6.0 | 0.06 | 20.28 | 0.01 | 2.153 | 12.58 | 5.53 | 1.2 | 98.6 | 0.2 | 0.06 | 0.74 | 0.80 | 4.13 | 2.3 | 0.008 | 0.74 | 0.0 | 0.05 | 19.63 | 0.01 | 2.143 | 7.49 | 3.03 | 1.6 | 98.3 | 0.2 | 0.51 | 0.52 | 0.78 | 0.85 | 4.66 | 31320 | 3588 | 12 | 66 | 0 | 0 | 0 | logfile |
✔ | 7N00 | 24095 | 2023-04-20 | 2021-05-24 | 2.27 | 3.74 | 2.49 | 3.3 | 0.004 | 0.55 | 0.0 | 0.05 | 12.23 | 0.00 | 2.138 | 5.26 | 3.44 | 2.9 | 97.1 | 0.0 | -1.01 | 0.78 | 0.78 | 4.22 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 14.90 | 0.00 | 2.031 | 10.25 | 1.89 | 2.6 | 97.4 | 0.0 | -0.51 | 1.02 | 0.73 | 0.87 | 3.43 | 5817 | 806 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RXG | 24730 | 2023-04-22 | 2021-08-23 | 2.28 | 2.01 | — | 2.3 | 0.008 | 1.27 | 0.0 | 0.05 | 17.95 | 0.00 | 2.211 | 14.00 | 0.18 | 2.5 | 97.4 | 0.2 | -0.83 | 0.61 | 0.82 | 4.82 | 2.3 | 0.005 | 0.64 | 0.0 | 0.04 | 17.08 | 0.01 | 2.010 | 16.49 | 0.89 | 3.3 | 96.7 | 0.0 | 1.26 | 0.91 | 0.66 | 0.87 | 5.46 | 11380 | 1300 | 6 | 0 | 26 | 48 | 96 | logfile |
✔ | 7BCV | 12144 | 2023-04-24 | 2020-12-21 | 2.28 | 2.56 | — | 2.5 | 0.008 | 0.96 | 0.0 | 0.06 | 14.30 | 0.01 | 2.371 | 4.21 | 0.47 | 3.0 | 97.0 | 0.0 | -2.14 | 0.85 | 0.88 | 5.31 | 2.5 | 0.005 | 0.61 | 0.0 | 0.05 | 16.39 | 0.00 | 2.186 | 6.34 | 1.28 | 3.5 | 96.5 | 0.0 | 0.60 | 0.50 | 0.81 | 0.90 | 5.07 | 120960 | 15960 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 7U5M | 26355 | 2023-04-21 | 2022-03-02 | 2.28 | 2.36 | 2.38 | 2.4 | 0.008 | 0.96 | 0.0 | 0.07 | 12.19 | 0.00 | 2.296 | 4.95 | 1.87 | 3.6 | 96.4 | 0.0 | -0.13 | 0.74 | 0.83 | 6.21 | 2.4 | 0.003 | 0.56 | 0.0 | 0.05 | 15.42 | 0.00 | 2.213 | 5.39 | 1.31 | 2.3 | 97.7 | 0.0 | -0.23 | 0.33 | 0.75 | 0.84 | 5.46 | 10627 | 1328 | 12 | 0 | 4 | 399 | 0 | logfile |
✔ | 7DYR | 30923 | 2023-04-22 | 2021-01-22 | 2.28 | 2.34 | — | 2.5 | 0.008 | 0.78 | 0.0 | 0.05 | 15.45 | 0.01 | 2.205 | 6.01 | 3.56 | 7.2 | 92.5 | 0.3 | 0.10 | 0.68 | 0.76 | 2.43 | 2.4 | 0.004 | 0.64 | 0.0 | 0.04 | 15.99 | 0.01 | 2.203 | 5.01 | 3.05 | 6.4 | 93.5 | 0.2 | 1.48 | 0.54 | 0.83 | 0.89 | 2.30 | 13326 | 1791 | 12 | 0 | 3 | 0 | 0 | logfile |
✔ | 8D1K | 27133 | 2023-04-23 | 2022-05-27 | 2.28 | 2.51 | 2.43 | 2.5 | 0.013 | 1.28 | 0.0 | 0.07 | 18.10 | 0.01 | 2.287 | 6.59 | 2.65 | 1.1 | 98.9 | 0.0 | 0.89 | 0.70 | 0.91 | 4.11 | 2.5 | 0.004 | 0.58 | 0.0 | 0.04 | 17.05 | 0.00 | 2.240 | 5.19 | 1.59 | 0.9 | 99.1 | 0.0 | 1.18 | 0.37 | 0.66 | 0.89 | 4.00 | 16305 | 1880 | 10 | 0 | 45 | 0 | 0 | logfile |
✔ | 7E27 | 30953 | 2023-04-22 | 2021-02-04 | 2.29 | 2.55 | — | 2.6 | 0.007 | 0.91 | 0.0 | 0.06 | 14.59 | 0.01 | 2.322 | 2.20 | 0.42 | 1.4 | 98.6 | 0.0 | -2.60 | 0.63 | 0.86 | 4.69 | 2.5 | 0.004 | 0.63 | 0.0 | 0.05 | 15.83 | 0.00 | 2.192 | 3.34 | 2.03 | 1.1 | 98.9 | 0.0 | 1.34 | 0.40 | 0.64 | 0.87 | 4.68 | 11475 | 1435 | 15 | 0 | 5 | 90 | 0 | logfile |
✘ | 7P13 | 13154 | 2023-04-22 | 2021-07-01 | 2.29 | 1.96 | 2.28 | 1.7 | 0.016 | 1.06 | 0.0 | 0.07 | 14.07 | 0.01 | 2.430 | 5.24 | 0.00 | 3.3 | 96.7 | 0.0 | 2.06 | 0.82 | 0.87 | 4.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13727 | 1743 | 7 | 0 | 0 | 0 | 154 | logfile |
✔ | 7E26 | 30952 | 2023-04-22 | 2021-02-04 | 2.29 | 2.97 | — | 2.9 | 0.009 | 0.93 | 0.0 | 0.06 | 14.05 | 0.01 | 2.312 | 2.69 | 1.19 | 1.5 | 98.5 | 0.0 | -2.93 | 0.73 | 0.88 | 5.43 | 2.9 | 0.003 | 0.51 | 0.0 | 0.04 | 15.93 | 0.00 | 2.189 | 4.06 | 1.69 | 1.8 | 98.2 | 0.0 | 1.72 | 0.32 | 0.57 | 0.83 | 4.90 | 11360 | 1435 | 10 | 0 | 0 | 80 | 0 | logfile |
✔ | 7VD9 | 31911 | 2023-04-24 | 2021-09-06 | 2.29 | 1.75 | 2.28 | 1.8 | 0.002 | 0.54 | 0.0 | 0.04 | 17.25 | 0.00 | 2.194 | 7.80 | 2.33 | 3.8 | 96.2 | 0.0 | 0.41 | 0.58 | 0.72 | 3.68 | 1.8 | 0.003 | 0.57 | 0.0 | 0.04 | 17.52 | 0.01 | 2.206 | 7.90 | 2.62 | 3.9 | 96.1 | 0.0 | 0.00 | 0.30 | 0.58 | 0.73 | 3.61 | 16426 | 1991 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7MBQ | 23741 | 2023-04-29 | 2021-04-01 | 2.3 | 3.00 | — | 2.6 | 0.003 | 0.59 | 0.0 | 0.04 | 15.27 | 0.01 | 2.246 | 6.69 | 0.58 | 3.9 | 96.0 | 0.1 | 1.80 | 0.80 | 0.88 | 3.90 | 2.7 | 0.004 | 0.55 | 0.0 | 0.04 | 15.48 | 0.00 | 2.211 | 5.51 | 1.39 | 2.9 | 97.1 | 0.0 | 2.59 | 0.36 | 0.77 | 0.92 | 3.79 | 30616 | 3984 | 12 | 0 | 20 | 16 | 0 | logfile |
✔ | 8G86 | 29837 | 2023-04-22 | 2023-02-17 | 2.3 | 2.24 | 2.41 | 2.5 | 0.003 | 0.50 | 0.0 | 0.03 | 27.67 | 0.00 | 2.275 | 6.71 | 0.95 | 0.9 | 99.1 | 0.0 | 1.60 | 0.69 | 0.83 | 5.02 | 2.4 | 0.005 | 0.63 | 0.0 | 0.04 | 29.42 | 0.00 | 2.112 | 7.41 | 2.06 | 1.5 | 98.5 | 0.0 | 2.50 | 0.92 | 0.70 | 0.85 | 4.86 | 11972 | 759 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 7UZU | 26918 | 2023-04-20 | 2022-05-09 | 2.3 | 2.23 | 2.31 | 2.2 | 0.003 | 0.57 | 0.0 | 0.04 | 17.47 | 0.01 | 2.124 | 3.14 | 0.52 | 3.1 | 96.9 | 0.0 | 1.73 | 0.60 | 0.87 | 5.53 | 2.2 | 0.003 | 0.52 | 0.0 | 0.04 | 17.57 | 0.00 | 2.102 | 3.83 | 0.78 | 4.0 | 96.0 | 0.0 | 2.44 | 0.18 | 0.59 | 0.87 | 5.51 | 7399 | 483 | 4 | 0 | 0 | 79 | 3655 | logfile |
✘ | 7SQV | 25396 | 2023-04-20 | 2021-11-06 | 2.3 | 2.95 | 2.29 | 2.8 | 0.001 | 0.38 | 0.0 | 0.04 | 16.08 | 0.00 | 2.314 | 1.47 | 0.63 | 0.7 | 99.3 | 0.0 | 1.86 | 0.76 | 0.88 | 3.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4471 | 573 | 5 | 0 | 0 | 7 | 0 | logfile |
✔ | 6UVA | 20906 | 2023-04-21 | 2019-11-01 | 2.3 | 2.12 | 2.31 | 2.2 | 0.002 | 0.55 | 0.0 | 0.04 | 18.04 | 0.00 | 2.207 | 6.66 | 3.36 | 3.2 | 96.8 | 0.0 | -2.29 | 0.63 | 0.72 | 2.83 | 2.3 | 0.003 | 0.63 | 0.0 | 0.04 | 18.40 | 0.00 | 2.148 | 9.03 | 3.26 | 4.6 | 95.4 | 0.0 | 0.18 | 1.31 | 0.66 | 0.79 | 2.96 | 9561 | 1199 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XMU | 33305 | 2023-04-23 | 2022-04-26 | 2.3 | 2.51 | 2.33 | 2.5 | 0.016 | 0.90 | 0.0 | 0.05 | 17.56 | 0.04 | 1.897 | 4.23 | 1.57 | 2.6 | 97.4 | 0.0 | -0.10 | 0.75 | 0.87 | 4.86 | 2.5 | 0.003 | 1.81 | 0.0 | 0.04 | 17.21 | 0.00 | 1.872 | 4.69 | 0.46 | 2.6 | 97.4 | 0.0 | 0.29 | 1.11 | 0.77 | 0.88 | 4.57 | 15294 | 1842 | 18 | 0 | 36 | 822 | 0 | logfile |
✔ | 8E3X | 27872 | 2023-04-21 | 2022-08-17 | 2.3 | 3.02 | 2.29 | 2.8 | 0.003 | 0.58 | 0.0 | 0.04 | 13.02 | 0.00 | 2.239 | 5.84 | 0.00 | 2.1 | 97.9 | 0.0 | 1.49 | 0.70 | 0.82 | 3.16 | 2.8 | 0.003 | 0.53 | 0.0 | 0.04 | 15.31 | 0.00 | 2.206 | 5.61 | 0.84 | 2.1 | 97.9 | 0.0 | 1.71 | 0.97 | 0.75 | 0.89 | 3.61 | 8979 | 1140 | 8 | 0 | 0 | 11 | 0 | logfile |
✔ | 7RXH | 24731 | 2023-04-20 | 2021-08-23 | 2.3 | 3.07 | — | 2.8 | 0.009 | 1.40 | 0.0 | 0.05 | 19.48 | 0.00 | 2.211 | 13.92 | 0.56 | 2.7 | 97.1 | 0.2 | -0.87 | 0.63 | 0.78 | 3.25 | 2.8 | 0.004 | 0.49 | 0.0 | 0.04 | 15.67 | 0.00 | 2.016 | 13.47 | 1.30 | 3.7 | 96.3 | 0.0 | 2.12 | 1.67 | 0.60 | 0.91 | 4.20 | 5631 | 626 | 1 | 0 | 18 | 24 | 48 | logfile |