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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7XMU | 33305 | 2023-04-23 | 2022-04-26 | 2.3 | 2.51 | 2.33 | 2.5 | 0.016 | 0.90 | 0.0 | 0.05 | 17.56 | 0.04 | 1.897 | 4.23 | 1.57 | 2.6 | 97.4 | 0.0 | -0.10 | 0.75 | 0.87 | 4.86 | 2.5 | 0.003 | 1.81 | 0.0 | 0.04 | 17.21 | 0.00 | 1.872 | 4.69 | 0.46 | 2.6 | 97.4 | 0.0 | 0.29 | 1.11 | 0.77 | 0.88 | 4.57 | 15294 | 1842 | 18 | 0 | 36 | 822 | 0 | logfile |
✔ | 7R47 | 14282 | 2023-04-25 | 2022-02-08 | 2.3 | 2.29 | — | 2.3 | 0.008 | 0.81 | 0.0 | 0.85 | 17.14 | 0.01 | 1.921 | 2.60 | 1.15 | 2.1 | 97.9 | 0.0 | 0.85 | 0.73 | 0.90 | 6.13 | 2.3 | 0.007 | 1.32 | 0.0 | 0.26 | 16.92 | 0.00 | 1.867 | 4.03 | 1.22 | 1.6 | 98.4 | 0.0 | 1.61 | 1.49 | 0.74 | 0.92 | 5.86 | 68578 | 8089 | 116 | 0 | 51 | 1836 | 0 | logfile |
✔ | 7UZU | 26918 | 2023-04-20 | 2022-05-09 | 2.3 | 2.23 | 2.31 | 2.2 | 0.003 | 0.57 | 0.0 | 0.04 | 17.47 | 0.01 | 2.124 | 3.14 | 0.52 | 3.1 | 96.9 | 0.0 | 1.73 | 0.60 | 0.87 | 5.53 | 2.2 | 0.003 | 0.52 | 0.0 | 0.04 | 17.57 | 0.00 | 2.102 | 3.83 | 0.78 | 4.0 | 96.0 | 0.0 | 2.44 | 0.18 | 0.59 | 0.87 | 5.51 | 7399 | 483 | 4 | 0 | 0 | 79 | 3655 | logfile |
✔ | 8E3Y | 27873 | 2023-04-21 | 2022-08-17 | 2.3 | 2.68 | 2.31 | 2.6 | 0.003 | 0.60 | 0.0 | 0.05 | 12.65 | 0.00 | 2.237 | 5.72 | 0.11 | 2.0 | 98.0 | 0.0 | 1.26 | 0.72 | 0.85 | 4.19 | 2.6 | 0.003 | 0.54 | 0.0 | 0.04 | 15.61 | 0.00 | 2.222 | 8.10 | 0.42 | 1.9 | 98.1 | 0.0 | 1.94 | 0.80 | 0.74 | 0.88 | 4.23 | 8966 | 1139 | 8 | 0 | 0 | 14 | 0 | logfile |
✔ | 7RZU | 24778 | 2023-04-19 | 2021-08-27 | 2.3 | 2.32 | — | 2.0 | 0.006 | 0.50 | 0.0 | 0.04 | 13.61 | 0.01 | 2.212 | 7.50 | 0.00 | 2.9 | 97.1 | 0.0 | 1.69 | 0.77 | 0.78 | 1.84 | 2.0 | 0.002 | 0.48 | 0.0 | 0.03 | 15.88 | 0.00 | 2.308 | 6.69 | 1.40 | 0.0 | 100.0 | 0.0 | 5.49 | 0.47 | 0.80 | 0.81 | 1.54 | 2439 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MBQ | 23741 | 2023-04-29 | 2021-04-01 | 2.3 | 3.00 | — | 2.6 | 0.003 | 0.59 | 0.0 | 0.04 | 15.27 | 0.01 | 2.246 | 6.69 | 0.58 | 3.9 | 96.0 | 0.1 | 1.80 | 0.80 | 0.88 | 3.90 | 2.7 | 0.004 | 0.55 | 0.0 | 0.04 | 15.48 | 0.00 | 2.211 | 5.51 | 1.39 | 2.9 | 97.1 | 0.0 | 2.59 | 0.36 | 0.77 | 0.92 | 3.79 | 30616 | 3984 | 12 | 0 | 20 | 16 | 0 | logfile |
✔ | 7QSM | 14134 | 2023-04-26 | 2022-01-13 | 2.3 | 2.31 | — | 2.3 | 0.007 | 0.92 | 0.0 | 0.85 | 15.81 | 0.00 | 1.463 | 2.79 | 0.58 | 2.3 | 97.6 | 0.0 | 0.75 | 0.76 | 0.90 | 6.42 | 2.3 | 0.007 | 1.29 | 0.0 | 0.25 | 16.21 | 0.00 | 1.942 | 4.43 | 0.72 | 1.6 | 98.3 | 0.0 | 1.81 | 0.81 | 0.77 | 0.91 | 5.60 | 71640 | 8262 | 118 | 0 | 62 | 2774 | 0 | logfile |
✔ | 6KPK | 0749 | 2023-04-22 | 2019-08-15 | 2.3 | 3.44 | — | 3.0 | 0.006 | 0.71 | 0.0 | 0.06 | 12.55 | 0.00 | 2.127 | 4.93 | 0.37 | 5.5 | 94.5 | 0.0 | -3.66 | 0.84 | 0.88 | 4.21 | 3.2 | 0.004 | 0.73 | 1.0 | 0.13 | 14.36 | 0.00 | 1.954 | 5.48 | 0.66 | 3.8 | 96.2 | 0.0 | 0.92 | 0.75 | 0.83 | 0.89 | 4.27 | 62209 | 3936 | 24 | 0 | 24 | 0 | 31225 | logfile |
✔ | 7R41 | 14251 | 2023-04-26 | 2022-02-08 | 2.3 | 2.35 | — | 2.4 | 0.008 | 0.85 | 0.0 | 0.84 | 16.91 | 0.00 | 1.904 | 3.40 | 1.01 | 2.4 | 97.5 | 0.0 | 0.57 | 0.71 | 0.90 | 5.72 | 2.4 | 0.007 | 1.31 | 0.0 | 0.25 | 16.89 | 0.00 | 1.989 | 4.52 | 1.04 | 1.8 | 98.2 | 0.0 | 1.62 | 0.79 | 0.71 | 0.91 | 5.22 | 69138 | 8194 | 111 | 0 | 57 | 1307 | 0 | logfile |
✔ | 8E3X | 27872 | 2023-04-21 | 2022-08-17 | 2.3 | 3.02 | 2.29 | 2.8 | 0.003 | 0.58 | 0.0 | 0.04 | 13.02 | 0.00 | 2.239 | 5.84 | 0.00 | 2.1 | 97.9 | 0.0 | 1.49 | 0.70 | 0.82 | 3.16 | 2.8 | 0.003 | 0.53 | 0.0 | 0.04 | 15.31 | 0.00 | 2.206 | 5.61 | 0.84 | 2.1 | 97.9 | 0.0 | 1.71 | 0.97 | 0.75 | 0.89 | 3.61 | 8979 | 1140 | 8 | 0 | 0 | 11 | 0 | logfile |
✔ | 6ZK9 | 11241 | 2023-04-29 | 2020-06-30 | 2.3 | 2.55 | — | 2.4 | 0.008 | 1.05 | 0.0 | 1.58 | 10.47 | 0.01 | 2.257 | 5.07 | 0.07 | 3.2 | 96.8 | 0.0 | -2.52 | 0.78 | 0.92 | 6.57 | 2.4 | 0.012 | 2.33 | 0.0 | 0.48 | 15.01 | 0.00 | 2.065 | 8.80 | 1.07 | 2.7 | 97.3 | 0.0 | 0.40 | 0.47 | 0.80 | 0.93 | 6.07 | 29587 | 3480 | 45 | 0 | 19 | 1472 | 0 | logfile |
✔ | 8G86 | 29837 | 2023-04-22 | 2023-02-17 | 2.3 | 2.24 | 2.41 | 2.5 | 0.003 | 0.50 | 0.0 | 0.03 | 27.67 | 0.00 | 2.275 | 6.71 | 0.95 | 0.9 | 99.1 | 0.0 | 1.60 | 0.69 | 0.83 | 5.02 | 2.4 | 0.005 | 0.63 | 0.0 | 0.04 | 29.42 | 0.00 | 2.112 | 7.41 | 2.06 | 1.5 | 98.5 | 0.0 | 2.50 | 0.92 | 0.70 | 0.85 | 4.86 | 11972 | 759 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 8CXQ | 27067 | 2023-04-20 | 2022-05-22 | 2.3 | 3.31 | 2.77 | 3.1 | 0.002 | 0.46 | 0.0 | 0.04 | 10.31 | 0.00 | 2.008 | 5.61 | 0.22 | 3.9 | 96.0 | 0.1 | 0.30 | 0.78 | 0.80 | 2.66 | 3.1 | 0.004 | 0.53 | 1.0 | 0.04 | 12.19 | 0.00 | 1.888 | 6.75 | 0.69 | 4.8 | 95.1 | 0.0 | -0.13 | 0.39 | 0.73 | 0.76 | 2.52 | 56384 | 3666 | 6 | 0 | 0 | 0 | 27792 | logfile |
✔ | 7RXH | 24731 | 2023-04-20 | 2021-08-23 | 2.3 | 3.07 | — | 2.8 | 0.009 | 1.40 | 0.0 | 0.05 | 19.48 | 0.00 | 2.211 | 13.92 | 0.56 | 2.7 | 97.1 | 0.2 | -0.87 | 0.63 | 0.78 | 3.25 | 2.8 | 0.004 | 0.49 | 0.0 | 0.04 | 15.67 | 0.00 | 2.016 | 13.47 | 1.30 | 3.7 | 96.3 | 0.0 | 2.12 | 1.67 | 0.60 | 0.91 | 4.20 | 5631 | 626 | 1 | 0 | 18 | 24 | 48 | logfile |
✔ | 6Li9 | 0903 | 2023-04-24 | 2019-12-10 | 2.3 | 2.38 | — | 2.4 | 0.008 | 1.00 | 0.0 | 0.07 | 13.76 | 0.01 | 2.265 | 2.26 | 0.21 | 5.0 | 95.0 | 0.0 | -4.31 | 0.63 | 0.75 | 4.03 | 2.4 | 0.003 | 0.78 | 0.0 | 0.05 | 16.26 | 0.00 | 2.101 | 7.08 | 1.27 | 3.8 | 96.2 | 0.0 | 0.04 | 1.68 | 0.69 | 0.84 | 3.89 | 17988 | 2164 | 22 | 0 | 26 | 246 | 0 | logfile |
✔ | 6KQ4 | 0750 | 2023-04-22 | 2019-08-16 | 2.3 | 3.29 | — | 3.0 | 0.007 | 0.65 | 0.0 | 0.06 | 13.31 | 0.00 | 2.167 | 3.58 | 0.37 | 4.3 | 95.7 | 0.0 | -3.29 | 0.85 | 0.87 | 4.30 | 2.9 | 0.005 | 0.74 | 1.0 | 0.13 | 15.73 | 0.00 | 2.009 | 4.52 | 0.44 | 3.8 | 96.2 | 0.0 | 1.19 | 0.79 | 0.84 | 0.89 | 4.03 | 62206 | 3936 | 24 | 0 | 24 | 0 | 31222 | logfile |
✔ | 7SXT | 25505 | 2023-04-27 | 2021-11-24 | 2.31 | 3.14 | — | 2.6 | 0.005 | 0.78 | 0.0 | 0.05 | 13.05 | 0.01 | 2.287 | 2.67 | 0.00 | 2.8 | 97.2 | 0.0 | -0.67 | 0.84 | 0.83 | 2.91 | 2.6 | 0.005 | 0.63 | 0.0 | 0.05 | 14.73 | 0.00 | 2.176 | 7.33 | 0.80 | 2.4 | 97.6 | 0.0 | 0.49 | 1.18 | 0.85 | 0.87 | 3.08 | 25248 | 3120 | 24 | 0 | 60 | 0 | 0 | logfile |
✔ | 6VSA | 21373 | 2023-04-21 | 2020-02-10 | 2.32 | 3.14 | — | 2.5 | 0.013 | 2.26 | 75.0 | 0.16 | 18.03 | 0.01 | 2.048 | 13.16 | 4.44 | 2.3 | 97.7 | 0.0 | -1.58 | 0.94 | 0.94 | 4.86 | 2.6 | 0.004 | 0.59 | 0.0 | 0.04 | 17.37 | 0.00 | 2.166 | 11.48 | 1.74 | 0.4 | 99.5 | 0.1 | 1.16 | 1.15 | 0.93 | 0.90 | 4.49 | 9712 | 1175 | 10 | 0 | 0 | 42 | 0 | logfile |
✔ | 7SQ6 | 25377 | 2023-04-23 | 2021-11-04 | 2.32 | 2.12 | — | 2.3 | 0.006 | 0.78 | 0.0 | 0.06 | 16.59 | 0.00 | 2.408 | 4.99 | 0.00 | 2.8 | 97.2 | 0.0 | 1.57 | 0.69 | 0.88 | 4.86 | 2.3 | 0.003 | 0.56 | 0.0 | 0.04 | 16.68 | 0.00 | 2.225 | 3.43 | 2.57 | 1.6 | 98.4 | 0.0 | 2.19 | 0.92 | 0.70 | 0.90 | 4.55 | 15342 | 1868 | 16 | 0 | 14 | 12 | 0 | logfile |
✔ | 7UKH | 26581 | 2023-04-22 | 2022-04-01 | 2.33 | 2.55 | 2.38 | 2.5 | 0.004 | 0.61 | 0.0 | 0.04 | 17.88 | 0.00 | 2.035 | 7.98 | 1.80 | 2.9 | 97.1 | 0.0 | 0.99 | 0.77 | 0.85 | 3.75 | 2.5 | 0.003 | 0.54 | 0.0 | 0.04 | 18.19 | 0.00 | 2.189 | 7.26 | 1.41 | 2.6 | 97.4 | 0.0 | 1.49 | 0.29 | 0.75 | 0.86 | 3.77 | 12340 | 1536 | 16 | 0 | 16 | 0 | 0 | logfile |