The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6YHS | 10809 | 2021-01-06 | 2020-03-30 | 2.7 | 2.79 | 2.60 | 2.8 | 0.007 | 0.79 | 0.0 | 0.05 | 15.67 | 0.01 | 1.890 | 3.51 | 7.08 | 5.5 | 94.5 | 0.0 | -2.86 | 0.79 | 0.88 | 3.87 | 2.8 | 0.006 | 0.73 | 0.0 | 0.04 | 14.64 | 0.01 | 1.905 | 3.60 | 0.00 | 4.2 | 95.8 | 0.0 | -0.97 | 0.25 | 0.79 | 0.88 | 4.27 | 83514 | 3069 | 34 | 2800 | 161 | 0 | 0 | logfile |
✔ | 6ZVH | 11456 | 2021-01-06 | 2020-07-24 | 2.9 | 3.10 | 2.84 | 2.8 | 0.008 | 0.95 | 1.0 | 0.05 | 15.50 | 0.01 | 1.992 | 4.93 | 0.00 | 4.9 | 94.9 | 0.2 | -2.07 | 0.54 | 0.88 | 3.23 | 2.8 | 0.005 | 0.66 | 0.0 | 0.04 | 15.21 | 0.00 | 1.926 | 8.93 | 0.02 | 8.5 | 91.4 | 0.2 | -0.83 | 0.28 | 0.53 | 0.87 | 3.20 | 79014 | 5074 | 43 | 1815 | 33 | 0 | 0 | logfile |
✔ | 6WQ0 | 21867 | 2021-01-08 | 2020-04-28 | 2.8 | 2.89 | — | 2.9 | 0.007 | 0.71 | 0.0 | 0.04 | 13.85 | 0.01 | 2.210 | 4.29 | 0.00 | 1.6 | 98.4 | 0.0 | -0.40 | 0.60 | 0.90 | 4.25 | 2.9 | 0.004 | 0.59 | 0.0 | 0.04 | 13.80 | 0.00 | 2.269 | 3.66 | 0.17 | 0.8 | 99.2 | 0.0 | 3.18 | 0.29 | 0.59 | 0.89 | 3.74 | 57467 | 6026 | 48 | 602 | 0 | 0 | 0 | logfile |
✔ | 6YPU | 10869 | 2021-01-07 | 2020-04-16 | 2.9 | 2.97 | 2.78 | 2.9 | 0.012 | 0.99 | 0.0 | 0.06 | 16.54 | 0.01 | 1.849 | 5.98 | 11.02 | 9.3 | 90.5 | 0.2 | -3.96 | 0.78 | 0.85 | 2.54 | 2.9 | 0.004 | 0.60 | 0.0 | 0.04 | 14.58 | 0.00 | 1.905 | 4.86 | 0.00 | 6.1 | 93.9 | 0.0 | -0.79 | 0.31 | 0.78 | 0.84 | 2.99 | 33322 | 1496 | 17 | 1040 | 60 | 0 | 0 | logfile |
✔ | 6XEY | 22156 | 2021-01-06 | 2020-06-14 | 3.25 | 3.61 | 2.92 | 2.1 | 0.005 | 0.81 | 1.0 | 0.05 | 12.58 | 0.01 | 2.265 | 3.59 | 0.26 | 5.1 | 94.8 | 0.1 | -1.87 | 0.88 | 0.83 | 3.34 | 2.1 | 0.003 | 0.55 | 0.0 | 0.04 | 12.56 | 0.00 | 2.143 | 6.78 | 0.00 | 4.8 | 95.2 | 0.1 | -0.36 | 0.32 | 0.88 | 0.83 | 2.69 | 28482 | 3788 | 24 | 0 | 63 | 0 | 0 | logfile |
✔ | 6M54 | 30084 | 2021-01-07 | 2020-03-09 | 2.4 | 2.57 | — | 2.5 | 0.012 | 1.16 | 0.0 | 0.07 | 14.96 | 0.01 | 2.591 | 0.71 | 0.00 | 4.1 | 95.9 | 0.0 | -0.37 | 0.69 | 0.85 | 5.34 | 2.5 | 0.003 | 0.62 | 0.0 | 0.04 | 16.75 | 0.00 | 2.345 | 0.80 | 0.17 | 4.0 | 96.0 | 0.0 | 3.90 | 0.33 | 0.81 | 0.89 | 3.74 | 33382 | 4104 | 38 | 0 | 6 | 8 | 0 | logfile |
✔ | 6WQQ | 21873 | 2021-01-06 | 2020-04-29 | 3.1 | 2.53 | 3.04 | 3.0 | 0.002 | 0.45 | 2.0 | 0.03 | 14.51 | 0.00 | 2.203 | 3.53 | 0.36 | 3.9 | 96.1 | 0.0 | -4.07 | 0.73 | 0.80 | 2.74 | 3.0 | 0.009 | 0.98 | 0.0 | 0.05 | 16.65 | 0.01 | 1.876 | 6.05 | 0.04 | 8.8 | 91.2 | 0.0 | -3.19 | 0.34 | 0.74 | 0.81 | 3.33 | 81134 | 2671 | 28 | 2809 | 1 | 0 | 0 | logfile |
✔ | 6XS6 | 22301 | 2021-01-06 | 2020-07-15 | 3.7 | 2.21 | — | 2.2 | 0.004 | 0.83 | 0.0 | 0.05 | 14.26 | 0.01 | 2.240 | 4.49 | 0.00 | 6.1 | 93.9 | 0.0 | -1.99 | 0.57 | 0.59 | 2.30 | 2.2 | 0.002 | 0.56 | 0.0 | 0.04 | 14.30 | 0.00 | 2.198 | 7.68 | 0.10 | 4.5 | 95.5 | 0.0 | -0.81 | 0.34 | 0.57 | 0.58 | 2.03 | 18294 | 2357 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6U3Q | 20630 | 2021-01-18 | 2019-08-22 | 2.46 | 3.11 | — | 2.8 | 0.009 | 0.61 | 0.0 | 0.04 | 12.86 | 0.00 | 2.189 | 3.45 | 4.15 | 3.1 | 96.9 | 0.0 | -1.52 | 0.80 | 0.92 | 5.73 | 2.8 | 0.004 | 0.53 | 0.0 | 0.04 | 14.23 | 0.00 | 2.155 | 4.34 | 2.04 | 2.3 | 97.7 | 0.0 | -0.37 | 0.35 | 0.80 | 0.92 | 5.20 | 248280 | 31140 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 6o0Y | 0584 | 2021-01-05 | 2019-02-17 | 3.37 | 4.01 | — | 3.7 | 0.005 | 0.74 | 0.0 | 0.05 | 16.71 | 0.01 | 2.272 | 2.52 | 0.37 | 5.5 | 94.5 | 0.0 | -4.11 | 0.85 | 0.88 | 2.93 | 3.7 | 0.004 | 0.54 | 0.0 | 0.04 | 16.14 | 0.00 | 2.079 | 5.60 | 0.00 | 4.3 | 95.7 | 0.0 | 0.16 | 0.35 | 0.85 | 0.87 | 2.62 | 11828 | 1146 | 5 | 150 | 0 | 0 | 0 | logfile |
✔ | 6AZ3 | 7025 | 2021-01-08 | 2017-09-09 | 2.5 | 3.08 | — | 3.1 | 0.011 | 1.19 | 0.0 | 0.06 | 16.54 | 0.03 | 1.349 | 4.52 | 0.96 | 6.4 | 93.4 | 0.2 | -4.53 | 0.54 | 0.78 | 5.15 | 3.1 | 0.005 | 0.83 | 0.0 | 0.04 | 17.25 | 0.01 | 1.975 | 8.69 | 2.96 | 6.3 | 93.6 | 0.1 | -1.37 | 0.35 | 0.55 | 0.79 | 3.81 | 126561 | 6390 | 91 | 3507 | 44 | 1019 | 0 | logfile |
✔ | 6YY0 | 11001 | 2021-01-08 | 2020-05-04 | 3.23 | 3.34 | 3.07 | 3.3 | 0.006 | 0.69 | 0.0 | 0.04 | 15.27 | 0.00 | 1.847 | 8.05 | 0.00 | 8.4 | 91.6 | 0.0 | -0.84 | 0.72 | 0.84 | 2.97 | 3.3 | 0.004 | 0.57 | 0.0 | 0.04 | 15.04 | 0.00 | 1.772 | 6.19 | 0.00 | 5.0 | 95.0 | 0.0 | 0.32 | 0.35 | 0.73 | 0.84 | 2.80 | 61162 | 3926 | 25 | 0 | 11 | 17 | 30826 | logfile |
✔ | 6U48 | 20638 | 2021-01-06 | 2019-08-23 | 2.87 | 2.54 | 2.82 | 2.8 | 0.007 | 0.95 | 3.0 | 0.05 | 14.18 | 0.02 | 1.331 | 3.47 | 0.74 | 6.2 | 93.3 | 0.4 | -3.65 | 0.49 | 0.75 | 3.87 | 2.8 | 0.005 | 0.75 | 3.0 | 0.04 | 14.30 | 0.01 | 2.026 | 7.50 | 0.04 | 7.0 | 92.7 | 0.2 | -1.74 | 0.36 | 0.52 | 0.72 | 3.49 | 90950 | 3374 | 32 | 3016 | 4 | 0 | 0 | logfile |
✔ | 6TQF | 10550 | 2021-01-05 | 2019-12-16 | 3.5 | 3.81 | — | 3.7 | 0.009 | 0.98 | 0.0 | 0.06 | 15.82 | 0.01 | 2.092 | 2.95 | 0.09 | 5.2 | 94.8 | 0.0 | -6.53 | 0.74 | 0.90 | 2.73 | 3.7 | 0.002 | 0.57 | 0.0 | 0.04 | 13.86 | 0.00 | 2.054 | 2.29 | 0.00 | 2.8 | 97.2 | 0.0 | -3.30 | 0.37 | 0.73 | 0.89 | 2.69 | 10426 | 1268 | 4 | 0 | 14 | 0 | 0 | logfile |
✔ | 6o0Z | 0585 | 2021-01-05 | 2019-02-17 | 3.3 | 3.94 | — | 3.6 | 0.006 | 0.72 | 0.0 | 0.04 | 16.28 | 0.00 | 2.302 | 2.58 | 0.27 | 6.3 | 93.7 | 0.0 | -4.11 | 0.86 | 0.88 | 3.46 | 3.6 | 0.002 | 0.47 | 0.0 | 0.03 | 15.73 | 0.00 | 2.149 | 4.26 | 0.00 | 5.3 | 94.7 | 0.0 | 0.13 | 0.37 | 0.85 | 0.87 | 3.52 | 11912 | 1288 | 4 | 135 | 0 | 0 | 0 | logfile |
✔ | 6ZG7 | 11195 | 2021-01-06 | 2020-06-18 | 3.49 | 3.18 | 3.39 | 3.4 | 0.006 | 0.64 | 0.0 | 0.04 | 14.31 | 0.00 | 2.002 | 9.98 | 0.00 | 4.8 | 95.2 | 0.0 | -0.07 | 0.54 | 0.78 | 2.53 | 3.4 | 0.004 | 0.56 | 0.0 | 0.04 | 14.40 | 0.00 | 1.905 | 8.13 | 0.00 | 4.0 | 95.9 | 0.1 | 0.76 | 0.37 | 0.53 | 0.77 | 2.40 | 15587 | 1048 | 11 | 0 | 0 | 0 | 7852 | logfile |
✔ | 6V93 | 21115 | 2021-01-06 | 2019-12-13 | 3.1 | 3.37 | — | 3.3 | 0.006 | 0.74 | 0.0 | 0.75 | 12.61 | 0.00 | 2.117 | 5.76 | 0.00 | 7.0 | 93.0 | 0.0 | -2.84 | 0.78 | 0.84 | 3.32 | 3.3 | 0.007 | 1.29 | 0.0 | 0.24 | 13.58 | 0.00 | 2.082 | 6.67 | 0.06 | 7.4 | 92.6 | 0.0 | -0.31 | 0.38 | 0.79 | 0.84 | 3.45 | 18105 | 2198 | 14 | 26 | 4 | 220 | 0 | logfile |
✔ | 6CVM | 7770 | 2021-01-07 | 2018-03-28 | 1.9 | 2.49 | 1.94 | 2.3 | 0.012 | 0.93 | 0.0 | 0.07 | 10.11 | 0.01 | 2.053 | 3.57 | 0.00 | 2.7 | 97.3 | 0.0 | -1.16 | 0.81 | 0.91 | 7.66 | 2.3 | 0.003 | 0.58 | 0.0 | 0.04 | 13.78 | 0.00 | 2.040 | 6.14 | 0.60 | 2.6 | 97.4 | 0.0 | 0.70 | 0.38 | 0.84 | 0.92 | 6.84 | 37062 | 4084 | 12 | 0 | 20 | 4194 | 0 | logfile |
✔ | 6UPH | 20839 | 2021-01-05 | 2019-10-17 | 2.7 | 3.01 | 2.85 | 3.0 | 0.007 | 0.67 | 0.0 | 0.04 | 26.16 | 0.00 | 2.216 | 4.33 | 0.00 | 1.8 | 98.2 | 0.0 | -5.67 | 0.70 | 0.87 | 4.13 | 3.0 | 0.004 | 0.61 | 0.0 | 0.04 | 26.54 | 0.00 | 2.106 | 4.33 | 0.16 | 0.4 | 99.6 | 0.0 | 1.12 | 0.38 | 0.68 | 0.86 | 3.12 | 10677 | 732 | 10 | 238 | 0 | 0 | 0 | logfile |
✔ | 6LQM | 0948 | 2021-01-11 | 2020-01-14 | 3.09 | 3.18 | — | 3.1 | 0.016 | 1.27 | 3.0 | 0.07 | 17.29 | 0.03 | 1.296 | 4.28 | 1.60 | 7.4 | 92.4 | 0.2 | -3.93 | 0.83 | 0.85 | 3.33 | 3.1 | 0.011 | 1.03 | 0.0 | 0.05 | 17.12 | 0.01 | 1.177 | 9.26 | 0.07 | 8.1 | 91.8 | 0.1 | -1.91 | 0.38 | 0.83 | 0.86 | 3.48 | 139464 | 7108 | 53 | 3808 | 251 | 0 | 0 | logfile |