Table showing results for October 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7NNP	12482	2021-10-03	2021-02-25	3.2	2.99	3.18	3.2	0.006	0.92	0.0	0.18	15.38	0.01	2.223	5.43	0.00	3.5	96.5	0.0	-0.72	0.67	0.82	2.17	3.2	0.003	0.55	0.0	0.04	15.91	0.00	2.179	9.27	0.09	3.2	96.8	0.0	0.74	0.32	0.70	0.85	1.94	11096	1456	6	0	11	0	0	logfile
✔	6XLK	22246	2021-10-03	2020-06-28	3.3	3.63	—	3.5	0.033	0.78	0.0	0.10	20.13	0.00	2.216	5.71	0.41	0.9	99.1	0.0	-2.26	0.78	0.84	2.91	3.5	0.004	0.60	0.0	0.04	20.64	0.00	1.668	11.15	0.20	0.9	99.1	0.0	-1.15	0.32	0.79	0.85	2.74	5456	536	6	46	4	0	0	logfile
✔	6ZXA	11516	2021-10-03	2020-07-29	2.38	2.34	—	2.3	0.019	3.63	0.0	0.07	20.59	0.01	2.324	9.45	5.21	12.8	87.2	0.0	-1.00	0.75	0.90	5.13	2.3	0.026	2.78	0.0	0.05	21.30	0.01	2.229	12.30	2.38	12.5	87.5	0.0	0.94	0.32	0.75	0.87	4.36	8442	791	28	0	35	0	0	logfile
✔	7CKB	30384	2021-10-04	2020-07-16	3.24	3.29	—	3.2	0.008	0.88	0.0	0.05	16.33	0.01	2.160	6.92	1.05	4.0	96.0	0.0	-0.87	0.85	0.88	2.17	3.2	0.003	0.60	0.0	0.04	17.05	0.00	2.182	7.19	1.21	1.5	98.5	0.0	0.21	0.32	0.84	0.87	2.64	114840	15840	180	0	0	0	0	logfile
✔	7KMS	22927	2021-10-07	2020-11-03	3.64	4.47	3.77	3.7	0.002	0.46	0.0	0.04	13.82	0.00	2.079	3.31	0.00	4.3	95.7	0.0	0.04	0.86	0.79	1.47	3.7	0.007	0.74	0.0	0.04	14.75	0.00	1.780	9.18	0.05	4.5	95.5	0.0	-0.25	0.32	0.87	0.81	1.34	39677	4887	20	0	71	0	0	logfile
✔	6SZS	10353	2021-10-09	2019-10-02	3.06	3.27	—	3.2	0.008	0.93	1.0	0.05	15.95	0.01	2.211	4.86	0.56	7.5	92.5	0.1	-3.63	0.88	0.85	2.68	3.2	0.006	0.68	0.0	0.04	16.17	0.01	2.025	12.29	0.83	7.8	92.1	0.1	-1.08	0.33	0.88	0.86	2.29	147361	6100	56	4646	0	0	0	logfile
✔	7oP1	13011	2021-10-03	2021-05-28	3.7	3.77	—	3.6	0.004	0.63	0.0	0.04	13.67	0.00	1.848	7.00	0.00	4.7	95.3	0.0	-0.69	0.69	0.87	2.43	3.6	0.003	0.55	0.0	0.04	14.88	0.00	1.887	4.27	0.21	3.7	96.3	0.0	0.70	0.33	0.71	0.86	1.47	8744	1098	1	0	3	0	0	logfile
✔	7RK8	24494	2021-10-20	2021-07-22	2.27	2.34	—	2.3	0.004	0.61	0.0	0.05	14.03	0.00	2.161	3.94	0.00	1.9	98.1	0.0	-0.56	0.76	0.89	5.98	2.3	0.002	0.51	0.0	0.04	15.72	0.00	2.108	3.50	0.97	2.0	98.0	0.0	-0.51	0.33	0.72	0.87	5.64	246720	31020	60	0	0	0	0	logfile
✔	7D6X	30595	2021-10-03	2020-10-02	2.88	3.17	—	3.1	0.011	1.37	4.0	0.11	14.88	0.01	1.988	9.54	0.22	11.7	88.1	0.3	-2.90	0.74	0.88	3.52	3.1	0.013	1.24	0.0	0.05	16.52	0.01	2.099	9.02	1.89	10.5	89.5	0.0	-1.40	0.33	0.73	0.89	3.38	8711	1097	6	0	6	0	0	logfile
✔	7MiY	23868	2021-10-05	2021-04-18	3.1	3.21	—	3.2	0.017	1.20	1.0	0.32	16.61	0.00	2.054	9.66	1.31	4.9	95.0	0.2	-0.06	0.57	0.82	2.13	3.2	0.015	1.25	1.0	0.09	16.89	0.01	2.109	12.43	0.09	5.9	94.0	0.1	-0.10	0.33	0.58	0.84	2.25	21483	2598	10	0	28	0	0	logfile
✔	7MR3	23955	2021-10-05	2021-05-07	3.6	4.01	—	3.9	0.005	0.83	0.0	0.05	16.39	0.01	2.250	5.31	0.00	6.5	93.5	0.0	-1.62	0.83	0.82	1.78	3.9	0.003	0.58	0.0	0.04	17.76	0.00	2.194	9.13	0.21	6.1	93.9	0.0	0.12	0.33	0.83	0.83	1.28	23615	2854	5	40	0	0	0	logfile
✔	7M3G	23654	2021-10-04	2021-03-18	2.5	2.29	—	1.8	0.007	1.00	14.0	0.06	16.87	0.01	2.281	2.21	0.93	3.0	97.0	0.0	-2.02	0.84	0.85	3.70	1.8	0.005	0.66	14.0	0.04	17.32	0.01	2.174	4.08	2.72	3.9	96.1	0.0	-0.10	0.33	0.85	0.86	3.49	13298	1627	11	0	41	0	0	logfile
✔	7K5K	22682	2021-10-05	2020-09-17	2.66	2.76	2.81	2.7	0.007	0.69	0.0	0.05	15.27	0.00	1.722	6.82	4.06	10.2	89.7	0.0	-3.21	0.79	0.85	4.74	2.7	0.004	0.60	0.0	0.04	15.74	0.00	1.753	6.91	2.50	7.6	92.4	0.0	-1.00	0.33	0.81	0.87	4.11	24224	3270	12	0	18	0	0	logfile
✔	6X16	21990	2021-10-03	2020-05-18	3.39	3.34	—	3.4	0.005	0.98	0.0	0.05	15.10	0.01	2.322	3.97	0.31	4.8	95.2	0.0	-3.86	0.40	0.73	1.79	3.4	0.003	0.57	0.0	0.04	15.08	0.00	2.202	7.73	0.00	3.9	96.1	0.0	0.86	0.33	0.48	0.78	1.37	9438	1248	6	0	6	0	0	logfile
✔	7JRG	22445	2021-10-06	2020-08-12	3.2	3.47	3.19	3.3	0.009	0.85	0.0	0.23	14.73	0.00	2.045	10.03	0.09	6.8	93.1	0.1	0.25	0.79	0.88	2.78	3.3	0.003	0.60	0.0	0.04	15.81	0.00	2.138	7.93	0.12	5.2	94.8	0.0	1.08	0.33	0.78	0.89	1.99	32930	3983	30	0	37	0	0	logfile
✔	6o0Y	0584	2021-10-03	2019-02-17	3.37	4.01	—	3.7	0.005	0.74	0.0	0.05	16.71	0.01	2.272	2.52	0.37	5.5	94.5	0.0	-4.11	0.85	0.88	2.93	3.7	0.009	0.72	0.0	0.04	17.17	0.00	2.021	7.57	0.25	7.1	92.9	0.0	-0.71	0.33	0.86	0.89	2.70	11828	1146	5	150	0	0	0	logfile
✔	7K0N	22604	2021-10-04	2020-09-04	3.1	3.55	—	3.5	0.005	0.74	0.0	0.04	14.62	0.00	2.227	6.22	0.32	2.5	97.5	0.0	0.72	0.73	0.82	2.88	3.5	0.003	0.53	0.0	0.04	15.37	0.00	2.248	5.47	0.16	2.6	97.4	0.0	0.97	0.34	0.73	0.84	2.76	18470	2340	14	0	18	0	0	logfile
✔	7P5C	13198	2021-10-03	2021-07-14	3.2	3.07	3.09	3.3	0.004	0.58	0.0	0.04	14.51	0.00	2.220	6.92	0.00	2.1	97.9	0.0	2.41	0.57	0.82	2.09	3.3	0.004	0.58	0.0	0.04	15.98	0.00	2.241	6.27	0.30	1.7	98.3	0.0	4.05	0.34	0.60	0.84	1.32	6222	784	6	0	8	0	0	logfile
✔	7JZX	22583	2021-10-05	2020-09-02	3.4	3.20	—	3.4	0.009	0.92	0.0	0.05	15.94	0.01	2.239	5.33	0.40	7.0	93.0	0.0	-3.94	0.91	0.86	2.98	3.4	0.009	0.90	1.0	0.04	16.28	0.00	1.927	10.97	0.09	7.1	92.9	0.0	-1.55	0.34	0.92	0.88	2.51	23948	2954	11	61	0	0	0	logfile
✔	6X43	22039	2021-10-06	2020-05-22	3.6	3.68	—	3.6	0.010	1.02	0.0	0.06	16.79	0.01	1.966	10.22	0.17	9.1	90.7	0.2	-2.48	0.77	0.84	2.22	3.6	0.007	0.79	1.0	0.04	17.87	0.00	1.914	12.25	0.11	7.2	92.7	0.1	-1.19	0.34	0.78	0.83	1.65	36055	4316	11	111	5	0	0	logfile

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