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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PFE | 13373 | 2023-11-16 | 2021-08-11 | 4.4 | 5.35 | — | 3.9 | 0.007 | 0.94 | 0.0 | 0.05 | 29.84 | 0.01 | 2.264 | 6.87 | 0.00 | 1.5 | 98.5 | 0.0 | -0.43 | 0.91 | 0.85 | — | 3.9 | 0.004 | 0.67 | 0.0 | 0.04 | 29.52 | 0.00 | 2.116 | 16.48 | 0.00 | 2.9 | 97.1 | 0.0 | 0.80 | 1.61 | 0.91 | 0.85 | — | 13880 | 843 | 11 | 354 | 0 | 0 | 0 | logfile |
✔ | 6ZNN | 11318 | 2023-11-17 | 2020-07-06 | 4.5 | 5.10 | 4.05 | 4.4 | 0.014 | 1.77 | 0.0 | 0.09 | 13.07 | 0.00 | 1.790 | 1.74 | 0.00 | 7.7 | 92.2 | 0.1 | -3.13 | 0.78 | 0.72 | — | 4.4 | 0.003 | 0.72 | 0.0 | 0.04 | 12.89 | 0.00 | 2.134 | 15.08 | 0.00 | 5.1 | 94.8 | 0.1 | -0.21 | 0.99 | 0.81 | 0.82 | — | 19457 | 2320 | 17 | 0 | 328 | 0 | 0 | logfile |
✔ | 8G0D | 29654 | 2023-11-17 | 2023-01-31 | 2.9 | 3.84 | 3.02 | 2.9 | 0.005 | 0.87 | 0.0 | 0.18 | 6.88 | 0.00 | 1.844 | 0.67 | 0.00 | 2.6 | 97.3 | 0.0 | 0.74 | 0.68 | 0.65 | — | 2.9 | 0.007 | 0.88 | 0.0 | 0.09 | 7.08 | 0.00 | 1.754 | 3.95 | 0.00 | 10.8 | 89.2 | 0.1 | -0.16 | 1.63 | 0.80 | 0.81 | — | 19874 | 4860 | 30 | 0 | 16 | 0 | 0 | logfile |
✔ | 5ooF | 3839 | 2023-11-16 | 2017-08-07 | 3.4 | 3.53 | 3.41 | 3.5 | 0.015 | 1.53 | 0.0 | 0.08 | 11.81 | 0.02 | 2.010 | 3.30 | 0.00 | 6.3 | 91.0 | 2.7 | -1.40 | 0.71 | 0.85 | 2.69 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 15.42 | 0.00 | 2.025 | 9.02 | 0.26 | 3.1 | 96.4 | 0.5 | 0.56 | 1.81 | 0.70 | 0.87 | 1.90 | 14640 | 1855 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 8D4B | 27180 | 2023-11-15 | 2022-06-01 | 2.92 | 3.58 | 2.96 | 3.3 | 0.005 | 0.70 | 0.0 | 0.04 | 13.61 | 0.00 | 1.942 | 5.37 | 0.00 | 2.2 | 97.8 | 0.0 | -1.63 | 0.86 | 0.83 | 4.41 | 3.3 | 0.003 | 0.52 | 0.0 | 0.04 | 14.90 | 0.00 | 2.157 | 9.52 | 0.67 | 2.2 | 97.8 | 0.0 | 0.95 | 0.52 | 0.84 | 0.87 | 3.33 | 11010 | 1166 | 3 | 69 | 0 | 0 | 0 | logfile |
✔ | 7PF6 | 13369 | 2023-11-16 | 2021-08-11 | 4.0 | 4.89 | — | 3.7 | 0.006 | 0.99 | 0.0 | 0.06 | 29.66 | 0.01 | 2.268 | 7.80 | 0.00 | 1.9 | 98.1 | 0.0 | -0.75 | 0.87 | 0.76 | — | 3.7 | 0.005 | 0.82 | 0.0 | 0.06 | 30.49 | 0.00 | 1.989 | 25.24 | 0.29 | 3.8 | 96.2 | 0.0 | 0.10 | 1.73 | 0.87 | 0.78 | — | 13470 | 843 | 11 | 334 | 0 | 0 | 0 | logfile |
✔ | 7N74 | 24219 | 2023-11-14 | 2021-06-09 | 2.8 | 3.52 | 2.84 | 3.3 | 0.006 | 0.89 | 0.0 | 0.10 | 12.93 | 0.01 | 1.844 | 7.52 | 0.00 | 2.2 | 97.8 | 0.0 | 0.74 | 0.75 | 0.84 | 3.27 | 3.3 | 0.002 | 0.57 | 0.0 | 0.04 | 14.64 | 0.00 | 2.167 | 4.93 | 2.06 | 1.9 | 98.1 | 0.0 | 2.39 | 0.54 | 0.68 | 0.82 | 2.46 | 7859 | 1036 | 1 | 0 | 4 | 3 | 0 | logfile |
✔ | 7E23 | 30950 | 2023-11-13 | 2021-02-04 | 3.3 | 3.62 | — | 3.6 | 0.004 | 0.83 | 0.0 | 0.05 | 14.45 | 0.01 | 2.123 | 14.37 | 0.00 | 17.3 | 82.7 | 0.0 | -3.70 | 0.70 | 0.77 | 2.78 | 3.6 | 0.004 | 0.75 | 0.0 | 0.05 | 16.24 | 0.01 | 2.162 | 14.04 | 0.30 | 14.2 | 85.5 | 0.3 | -3.04 | 1.16 | 0.71 | 0.80 | 1.62 | 3133 | 403 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 6X32 | 22015 | 2023-11-15 | 2020-05-21 | 3.8 | 3.75 | — | 3.9 | 0.001 | 0.36 | 0.0 | 0.03 | 7.99 | 0.00 | 2.266 | 3.27 | 0.00 | 1.4 | 98.6 | 0.0 | -3.72 | 0.56 | 0.69 | 2.26 | 3.9 | 0.004 | 0.67 | 0.0 | 0.04 | 13.24 | 0.00 | 2.114 | 9.22 | 0.43 | 3.1 | 96.9 | 0.0 | 0.55 | 1.68 | 0.60 | 0.74 | 1.86 | 114280 | 14744 | 16 | 0 | 1416 | 0 | 0 | logfile |
✔ | 7PFD | 13372 | 2023-11-16 | 2021-08-11 | 4.4 | 7.91 | — | 3.8 | 0.006 | 0.92 | 0.0 | 0.05 | 29.97 | 0.01 | 2.245 | 6.72 | 0.00 | 2.1 | 97.9 | 0.0 | -0.57 | 0.89 | 0.77 | — | 3.8 | 0.005 | 0.73 | 0.0 | 0.04 | 31.24 | 0.01 | 2.120 | 25.00 | 0.00 | 3.2 | 96.8 | 0.0 | 0.14 | 1.82 | 0.89 | 0.70 | — | 13675 | 843 | 11 | 344 | 0 | 0 | 0 | logfile |
✔ | 7PSD | 13612 | 2023-11-14 | 2021-09-22 | 3.0 | 3.33 | 2.96 | 3.2 | 0.015 | 1.12 | 0.0 | 0.07 | 14.39 | 0.01 | 2.146 | 7.65 | 0.00 | 5.5 | 94.5 | 0.0 | -1.38 | 0.70 | 0.87 | 2.60 | 3.2 | 0.003 | 0.61 | 0.0 | 0.04 | 15.97 | 0.00 | 2.263 | 9.84 | 1.77 | 2.7 | 97.3 | 0.0 | 1.97 | 0.45 | 0.62 | 0.85 | 2.41 | 9032 | 1160 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 5VN8 | 8717 | 2023-11-17 | 2017-04-28 | 3.6 | 3.72 | 3.44 | 3.6 | 0.007 | 1.18 | 0.0 | 0.07 | 8.19 | 0.01 | 2.246 | 5.66 | 0.00 | 12.4 | 86.9 | 0.6 | -4.89 | 0.72 | 0.77 | 1.93 | 3.6 | 0.003 | 0.74 | 0.0 | 0.05 | 14.61 | 0.00 | 2.213 | 11.13 | 0.38 | 8.6 | 91.3 | 0.1 | -2.21 | 1.57 | 0.74 | 0.80 | 1.86 | 20589 | 2427 | 51 | 0 | 114 | 0 | 0 | logfile |
✔ | 7PFF | 13374 | 2023-11-16 | 2021-08-11 | 4.3 | 7.61 | — | 3.8 | 0.006 | 0.92 | 0.0 | 0.05 | 30.38 | 0.01 | 2.286 | 8.26 | 0.00 | 1.6 | 98.4 | 0.0 | -0.07 | 0.90 | 0.79 | — | 3.7 | 0.006 | 0.74 | 0.0 | 0.04 | 31.51 | 0.01 | 2.152 | 29.89 | 0.00 | 4.5 | 95.5 | 0.0 | 0.49 | 1.84 | 0.90 | 0.82 | — | 12935 | 768 | 10 | 334 | 0 | 0 | 0 | logfile |
✔ | 5ooE | 3838 | 2023-11-16 | 2017-08-07 | 3.6 | 3.72 | 3.50 | 3.7 | 0.016 | 1.64 | 0.0 | 0.07 | 10.52 | 0.02 | 1.939 | 3.56 | 0.00 | 4.8 | 93.2 | 2.0 | -1.39 | 0.68 | 0.85 | 2.69 | 3.7 | 0.004 | 0.65 | 0.0 | 0.04 | 15.30 | 0.00 | 1.995 | 10.22 | 0.20 | 3.2 | 96.8 | 0.0 | 0.43 | 2.68 | 0.68 | 0.85 | 2.43 | 14310 | 1810 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 7P03 | 13142 | 2023-11-18 | 2021-06-29 | 3.45 | 3.78 | — | 3.7 | 0.006 | 0.68 | 0.0 | 0.04 | 13.86 | 0.00 | 1.801 | 6.52 | 0.00 | 5.4 | 94.6 | 0.0 | -0.70 | 0.62 | 0.71 | 1.37 | 3.7 | 0.004 | 0.57 | 0.0 | 0.04 | 15.79 | 0.00 | 1.838 | 7.61 | 0.17 | 4.4 | 95.6 | 0.0 | 0.48 | 0.89 | 0.64 | 0.78 | 1.93 | 21149 | 1333 | 1 | 0 | 0 | 0 | 10498 | logfile |
✔ | 7LPA | 23474 | 2023-11-17 | 2021-02-11 | 3.37 | 3.43 | 3.23 | 3.5 | 0.009 | 0.88 | 0.0 | 0.05 | 17.79 | 0.00 | 2.201 | 7.90 | 0.00 | 4.1 | 95.9 | 0.0 | -0.82 | 0.56 | 0.75 | 2.45 | 3.5 | 0.005 | 0.60 | 0.0 | 0.04 | 16.54 | 0.00 | 2.244 | 6.93 | 0.84 | 3.7 | 96.3 | 0.0 | 0.50 | 0.36 | 0.62 | 0.75 | 2.08 | 18634 | 2392 | 8 | 0 | 30 | 0 | 0 | logfile |
✔ | 7K2T | 22644 | 2023-11-15 | 2020-09-09 | 3.6 | 3.72 | — | 3.7 | 0.005 | 0.78 | 0.0 | 0.04 | 13.98 | 0.00 | 1.955 | 9.52 | 0.00 | 4.4 | 95.6 | 0.0 | -3.30 | 0.69 | 0.84 | 2.63 | 3.7 | 0.003 | 0.64 | 0.0 | 0.04 | 16.25 | 0.00 | 1.912 | 9.68 | 0.45 | 3.7 | 96.3 | 0.0 | -0.65 | 0.68 | 0.69 | 0.84 | 1.98 | 10275 | 1249 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 7N70 | 24214 | 2023-11-14 | 2021-06-09 | 2.8 | 3.43 | 2.92 | 3.3 | 0.005 | 0.73 | 0.0 | 0.05 | 13.21 | 0.01 | 2.109 | 7.93 | 0.00 | 1.6 | 98.4 | 0.0 | 0.27 | 0.74 | 0.85 | 2.88 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 15.15 | 0.00 | 1.920 | 7.56 | 1.15 | 1.5 | 98.5 | 0.0 | 1.67 | 0.46 | 0.63 | 0.78 | 2.06 | 7953 | 1032 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7RLD | 24526 | 2023-11-21 | 2021-07-23 | 3.4 | 3.68 | — | 3.1 | 0.002 | 0.66 | 0.0 | 0.04 | 14.57 | 0.00 | 1.692 | 7.65 | 0.00 | 3.8 | 96.0 | 0.1 | -1.35 | 0.87 | 0.78 | 1.31 | 3.2 | 0.006 | 0.76 | 0.0 | 0.05 | 15.23 | 0.00 | 2.020 | 13.20 | 0.24 | 5.2 | 94.8 | 0.0 | -0.58 | 1.63 | 0.90 | 0.87 | 2.08 | 34854 | 4410 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 7N78 | 24223 | 2023-11-14 | 2021-06-09 | 3.0 | 3.81 | 3.01 | 3.5 | 0.010 | 0.96 | 0.0 | 0.06 | 12.83 | 0.01 | 1.930 | 8.14 | 0.00 | 2.6 | 97.4 | 0.0 | -1.34 | 0.71 | 0.83 | 3.03 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 13.79 | 0.00 | 2.008 | 6.24 | 1.09 | 1.9 | 98.1 | 0.0 | 2.24 | 0.43 | 0.64 | 0.76 | 1.67 | 7669 | 1030 | 1 | 0 | 11 | 3 | 0 | logfile |