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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7DDD | 30651 | 2022-04-07 | 2020-10-28 | 3.0 | 3.36 | — | 3.3 | 0.003 | 0.71 | 0.0 | 0.05 | 8.16 | 0.01 | 2.248 | 5.92 | 0.00 | 3.6 | 96.4 | 0.1 | -3.86 | 0.67 | 0.64 | 1.47 | 3.3 | 0.010 | 1.07 | 2.0 | 0.05 | 15.74 | 0.01 | 2.138 | 15.40 | 3.59 | 3.7 | 96.3 | 0.0 | -1.29 | 1.80 | 0.73 | 0.78 | 2.75 | 25503 | 3264 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 6PLV | 20377 | 2022-04-05 | 2019-07-01 | 3.3 | 3.42 | — | 3.4 | 0.010 | 1.05 | 0.0 | 0.06 | 9.18 | 0.01 | 1.521 | 4.23 | 0.00 | 5.6 | 94.4 | 0.0 | -5.00 | 0.68 | 0.84 | 4.62 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14655 | 1725 | 15 | 0 | 75 | 0 | 0 | logfile |
✔ | 7K0L | 22601 | 2022-04-04 | 2020-09-04 | 3.4 | 3.83 | — | 3.7 | 0.004 | 0.69 | 0.0 | 0.04 | 12.60 | 0.00 | 2.141 | 4.28 | 0.00 | 1.9 | 98.1 | 0.0 | 1.09 | 0.74 | 0.87 | 3.05 | 3.7 | 0.003 | 0.52 | 0.0 | 0.04 | 13.90 | 0.00 | 2.200 | 5.46 | 0.25 | 2.1 | 97.9 | 0.0 | 0.87 | 1.05 | 0.74 | 0.88 | 2.79 | 7619 | 964 | 4 | 0 | 2 | 0 | 0 | logfile |
✘ | 6PLT | 20375 | 2022-04-05 | 2019-07-01 | 3.2 | 3.64 | — | 3.5 | 0.009 | 1.00 | 0.0 | 0.06 | 9.13 | 0.01 | 1.522 | 4.03 | 0.00 | 5.6 | 94.4 | 0.0 | -4.61 | 0.67 | 0.83 | 4.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14445 | 1725 | 15 | 0 | 60 | 0 | 0 | logfile |
✔ | 7JSE | 22451 | 2022-04-05 | 2020-08-14 | 4.6 | 5.13 | — | 4.2 | 0.001 | 0.38 | 0.0 | 0.02 | 10.51 | 0.00 | 2.425 | 0.00 | 0.00 | 11.4 | 88.0 | 0.6 | -2.68 | 0.79 | 0.50 | — | 3.8 | 0.005 | 0.96 | 0.0 | 0.08 | 14.35 | 0.00 | 2.201 | 6.17 | 0.00 | 15.6 | 84.4 | 0.0 | -2.03 | 2.71 | 0.83 | 0.74 | — | 13288 | 3168 | 24 | 32 | 0 | 0 | 0 | logfile |
✔ | 7A7C | 11677 | 2022-04-04 | 2020-08-27 | 3.16 | 3.66 | 3.23 | 3.5 | 0.003 | 0.54 | 0.0 | 0.04 | 13.51 | 0.00 | 2.199 | 6.63 | 0.00 | 4.5 | 95.5 | 0.0 | -0.97 | 0.82 | 0.87 | 3.57 | 3.5 | 0.005 | 0.55 | 0.0 | 0.04 | 14.63 | 0.00 | 2.108 | 6.73 | 0.11 | 5.1 | 94.9 | 0.0 | -0.29 | 0.24 | 0.83 | 0.89 | 3.27 | 9387 | 1226 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 7BoJ | 30130 | 2022-04-06 | 2020-03-19 | 2.5 | 2.54 | 2.38 | 2.5 | 0.007 | 0.92 | 0.0 | 0.06 | 12.86 | 0.01 | 2.271 | 3.34 | 0.00 | 2.4 | 97.6 | 0.0 | -2.48 | 0.76 | 0.86 | 4.26 | 2.5 | 0.003 | 0.61 | 0.0 | 0.04 | 15.84 | 0.00 | 2.176 | 7.06 | 2.44 | 2.2 | 97.8 | 0.0 | 1.33 | 0.47 | 0.78 | 0.88 | 4.07 | 123525 | 16165 | 61 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K0P | 22606 | 2022-04-06 | 2020-09-04 | 3.1 | 3.68 | — | 3.6 | 0.005 | 0.71 | 0.0 | 0.04 | 13.66 | 0.00 | 2.183 | 5.21 | 0.00 | 2.5 | 97.5 | 0.0 | 0.92 | 0.69 | 0.82 | 3.20 | 3.6 | 0.008 | 0.62 | 0.0 | 0.04 | 14.95 | 0.00 | 2.065 | 4.97 | 0.16 | 2.2 | 97.8 | 0.0 | 1.28 | 0.29 | 0.70 | 0.84 | 2.70 | 18572 | 2342 | 14 | 0 | 15 | 0 | 0 | logfile |
✔ | 7K0M | 22602 | 2022-04-06 | 2020-09-04 | 2.9 | 3.38 | — | 3.3 | 0.005 | 0.69 | 0.0 | 0.04 | 12.85 | 0.00 | 2.218 | 4.70 | 0.00 | 2.3 | 97.7 | 0.0 | 1.05 | 0.62 | 0.79 | 3.49 | 3.3 | 0.003 | 0.49 | 0.0 | 0.04 | 15.09 | 0.00 | 2.231 | 5.00 | 1.09 | 2.4 | 97.6 | 0.0 | 1.32 | 0.38 | 0.63 | 0.80 | 3.14 | 18578 | 2342 | 14 | 0 | 16 | 0 | 0 | logfile |
✔ | 7KNB | 22941 | 2022-04-07 | 2020-11-04 | 3.93 | 4.91 | 4.02 | 3.9 | 0.002 | 0.51 | 0.0 | 0.04 | 13.56 | 0.00 | 2.207 | 4.35 | 0.00 | 3.6 | 96.4 | 0.0 | -0.61 | 0.87 | 0.76 | 0.69 | 3.9 | 0.003 | 0.57 | 0.0 | 0.04 | 14.80 | 0.00 | 2.106 | 12.99 | 0.06 | 4.2 | 95.8 | 0.0 | -0.37 | 1.18 | 0.90 | 0.84 | 0.93 | 29224 | 3637 | 13 | 0 | 56 | 0 | 0 | logfile |
✔ | 7K0Q | 22608 | 2022-04-04 | 2020-09-04 | 3.3 | 3.61 | — | 3.5 | 0.007 | 0.77 | 0.0 | 0.05 | 12.67 | 0.00 | 2.116 | 5.18 | 0.00 | 3.3 | 96.7 | 0.0 | 0.45 | 0.70 | 0.85 | 3.35 | 3.5 | 0.002 | 0.50 | 0.0 | 0.04 | 14.30 | 0.00 | 2.194 | 4.96 | 0.21 | 2.5 | 97.5 | 0.0 | 1.17 | 1.46 | 0.73 | 0.87 | 2.87 | 8778 | 1107 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 7K5i | 22681 | 2022-04-07 | 2020-09-16 | 2.9 | 3.01 | — | 3.0 | 0.004 | 0.63 | 0.0 | 0.04 | 15.78 | 0.01 | 2.031 | 6.51 | 0.00 | 3.7 | 96.3 | 0.0 | -1.25 | 0.76 | 0.82 | 3.57 | 3.0 | 0.008 | 0.86 | 0.0 | 0.05 | 17.16 | 0.01 | 2.039 | 7.26 | 2.64 | 4.7 | 95.2 | 0.0 | -0.76 | 0.26 | 0.79 | 0.84 | 3.15 | 74540 | 4881 | 40 | 1665 | 4 | 0 | 0 | logfile |
✔ | 7C99 | 30309 | 2022-04-04 | 2020-06-05 | 3.36 | 3.44 | — | 3.5 | 0.008 | 1.05 | 0.0 | 0.05 | 16.20 | 0.00 | 1.776 | 9.93 | 0.00 | 6.0 | 94.0 | 0.0 | -5.91 | 0.50 | 0.85 | 3.07 | 3.5 | 0.003 | 0.57 | 0.0 | 0.04 | 18.82 | 0.00 | 2.094 | 6.18 | 0.40 | 5.7 | 94.3 | 0.0 | -2.32 | 2.17 | 0.51 | 0.87 | 2.57 | 7656 | 927 | 8 | 18 | 6 | 0 | 0 | logfile |
✔ | 7LBY | 23267 | 2022-04-05 | 2021-01-09 | 4.2 | 4.35 | — | 4.3 | 0.003 | 0.78 | 0.0 | 0.05 | 12.33 | 0.00 | 2.148 | 4.15 | 0.00 | 6.2 | 92.5 | 1.3 | -0.24 | 0.56 | 0.69 | — | 4.3 | 0.006 | 0.74 | 0.0 | 0.05 | 12.03 | 0.01 | 1.980 | 9.73 | 0.00 | 9.4 | 90.3 | 0.4 | -0.03 | 0.62 | 0.58 | 0.72 | — | 8800 | 1418 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 7K0K | 22600 | 2022-04-04 | 2020-09-04 | 2.6 | 2.96 | — | 2.9 | 0.006 | 0.71 | 0.0 | 0.05 | 12.70 | 0.00 | 1.915 | 7.43 | 0.00 | 2.2 | 97.8 | 0.0 | 0.53 | 0.68 | 0.85 | 4.15 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7615 | 964 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7A7A | 11676 | 2022-04-05 | 2020-08-27 | 3.08 | 3.57 | 3.16 | 3.5 | 0.009 | 0.75 | 0.0 | 0.05 | 13.72 | 0.01 | 2.167 | 9.08 | 0.00 | 9.0 | 91.0 | 0.0 | -2.02 | 0.82 | 0.87 | 3.53 | 3.4 | 0.004 | 0.61 | 0.0 | 0.04 | 14.99 | 0.01 | 2.216 | 7.31 | 0.10 | 4.7 | 95.3 | 0.0 | -0.56 | 0.77 | 0.81 | 0.88 | 2.70 | 10147 | 1324 | 4 | 0 | 2 | 0 | 0 | logfile |
✘ | 7E0K | 30935 | 2022-04-04 | 2021-01-28 | 3.09 | 2.58 | — | 3.1 | 0.010 | 1.45 | 0.0 | 0.05 | 18.57 | 0.02 | 1.210 | 8.40 | 0.00 | 7.2 | 92.8 | 0.0 | -3.05 | 0.62 | 0.82 | 4.58 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8044 | 677 | 6 | 0 | 58 | 0 | 0 | logfile |
✔ | 7CM5 | 30401 | 2022-04-08 | 2020-07-24 | 2.6 | 2.44 | — | 2.7 | 0.003 | 0.77 | 0.0 | 0.04 | 8.24 | 0.01 | 2.309 | 3.65 | 0.00 | 3.8 | 96.2 | 0.0 | -3.70 | 0.75 | 0.77 | 1.89 | 2.6 | 0.004 | 0.70 | 0.0 | 0.04 | 15.50 | 0.01 | 2.156 | 7.47 | 1.72 | 3.3 | 96.7 | 0.0 | 1.41 | 1.39 | 0.78 | 0.85 | 2.12 | 38304 | 4888 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KFZ | 22857 | 2022-04-04 | 2020-10-15 | 3.47 | 4.45 | 3.43 | 3.9 | 0.012 | 0.80 | 0.0 | 0.05 | 13.42 | 0.00 | 1.897 | 8.91 | 0.00 | 3.8 | 96.2 | 0.0 | -1.10 | 0.86 | 0.78 | 2.74 | 3.9 | 0.005 | 0.61 | 0.0 | 0.04 | 14.18 | 0.00 | 1.888 | 8.30 | 0.14 | 2.4 | 97.6 | 0.0 | 2.27 | 0.51 | 0.93 | 0.88 | 2.86 | 6592 | 803 | 3 | 0 | 2 | 0 | 0 | logfile |
✔ | 7KFU | 22856 | 2022-04-06 | 2020-10-14 | 3.9 | 3.92 | — | 3.8 | 0.006 | 0.83 | 0.0 | 0.05 | 14.44 | 0.01 | 1.548 | 6.32 | 0.00 | 4.9 | 95.1 | 0.0 | -1.04 | 0.73 | 0.72 | 1.56 | 3.8 | 0.009 | 0.92 | 1.0 | 0.04 | 16.78 | 0.00 | 1.665 | 13.98 | 0.17 | 5.1 | 94.9 | 0.0 | 0.30 | 2.54 | 0.76 | 0.75 | 1.53 | 21848 | 2674 | 6 | 0 | 0 | 0 | 0 | logfile |